Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021918
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 106 4e-24
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 60 4e-10
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 48 2e-06
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 43 4e-05
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 38 0.002
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 34 0.019
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.31
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.41
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.54
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.95
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.2
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 2.2
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 27 2.2
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 5.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 5.1
SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces pomb... 25 8.9
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 8.9
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 25 8.9
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 106 bits (254), Expect = 4e-24
Identities = 51/82 (62%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
AAVSKTA APIER+KLL+Q Q + + RYKGI + F R E+G++S WRGN AN
Sbjct: 38 AAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTAN 97
Query: 433 VIRYFPTQALNFAFKDKYKQVF 498
V+RYFPTQALNFAFKDK+K++F
Sbjct: 98 VLRYFPTQALNFAFKDKFKKMF 119
Score = 59.3 bits (137), Expect = 6e-10
Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Frame = +3
Query: 579 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
SL FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYRG
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRG 197
Score = 30.3 bits (65), Expect = 0.31
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 325 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 504
S + ++++ G+VD + + + GL +RG +V+ + L F D K V L
Sbjct: 166 SAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLV 225
Query: 505 G 507
G
Sbjct: 226 G 226
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 660 FSGLGNCISKIFKSDGLIGLYRGS 731
+ G+G C + +G+I L+RG+
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGN 94
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 59.7 bits (138), Expect = 4e-10
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN N
Sbjct: 31 ATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83
Query: 436 IRYFPTQALNFAFKDKYKQ 492
+R FP A+ FA + KQ
Sbjct: 84 LRAFPYGAVQFATFNMLKQ 102
Score = 32.7 bits (71), Expect = 0.058
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = +1
Query: 250 YLAAVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 429
+ + +T P + ++ QV + YK I A I K +G+ F+RG +
Sbjct: 235 FTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSS 291
Query: 430 NVIRYFPTQALNF 468
N+++ P ++ +
Sbjct: 292 NMLKIIPVMSITW 304
Score = 29.1 bits (62), Expect = 0.72
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 654 REFSGLGNCISKIFKSDGLIGLYRGSVCPC 743
+E++ L + + KI+ +GLIG +RG+ C
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 594 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
+P D R R + G G + + + I I+K++G+ G +RG
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRG 288
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = +1
Query: 262 VSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
V+K+ VAP++R+K+L Q H S + A R+ G+ A I GL ++G+ A + R
Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYR 88
Query: 442 YFPTQALNFAFKDKYKQVFL 501
FP + F ++ ++V +
Sbjct: 89 VFPYAGIKFVAYEQVRRVLI 108
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 43.2 bits (97), Expect = 4e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 591 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGSVCP 740
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG + P
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRGILPP 71
Score = 37.1 bits (82), Expect = 0.003
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 274 AVAPIERIKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
AVA I + L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 445 FPTQALNFAFKDKYKQVFLGGVTRRRSSGVTSLV 546
P +AL FA D Y +++ R+ SS S++
Sbjct: 76 APKRALKFASNDTYSKLWRKVFKRKDSSPALSIL 109
Score = 31.5 bits (68), Expect = 0.13
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 277 VAPIERIKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G A + R+
Sbjct: 122 VVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNGFEATMWRHVVW 174
Query: 454 QALNFAFKDKYK 489
A F K +
Sbjct: 175 NAGYFGVIQKIR 186
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/78 (24%), Positives = 40/78 (51%)
Frame = +1
Query: 262 VSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
VS+T AP++R+K++L + + + + ++ + G+ SF+ GN NV++
Sbjct: 140 VSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGNGINVLK 198
Query: 442 YFPTQALNFAFKDKYKQV 495
P ++ F + K+V
Sbjct: 199 VMPESSIKFGTYEAMKRV 216
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +1
Query: 271 TAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 450
T V P+ I+ LQ Q S A Y G +D F + K +G ++G N+++ P
Sbjct: 351 TIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407
Query: 451 TQALNFAFKDKYKQ 492
+ A+++ + K+
Sbjct: 408 SVAISYLVYENCKK 421
Score = 29.5 bits (63), Expect = 0.54
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 588 FVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRG 290
Score = 29.1 bits (62), Expect = 0.72
Identities = 18/88 (20%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 AVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSFWRGNFANV 435
+V++ + P++ +K +Q +S+ Q K I+ + + + K G+ ++RG +
Sbjct: 240 SVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGVLVGI 295
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTRR 519
+ FP A + + K+ ++G + R
Sbjct: 296 LGMFPYSATDLGTFEGLKRTWIGILASR 323
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 34.3 bits (75), Expect = 0.019
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +3
Query: 585 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGSV 734
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG+V
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRGAV 267
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.3 bits (65), Expect = 0.31
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
PI+ +K +Q ++A + YK + +I + GLL FW G + R + +
Sbjct: 223 PIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGI 276
Query: 463 NFAFKDKYKQV 495
F +K ++
Sbjct: 277 VFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.9 bits (64), Expect = 0.41
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 325 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
S I +Y G++ F + EQG++ + G A+++R P + F
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
Score = 29.5 bits (63), Expect = 0.54
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 597 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
P+ +TRL D G + S + +CI K + +G GLY+G
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKG 224
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.54
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 675 NCISKIFKSDGLIGLYRGSVCP 740
+C+ KI K++GL Y+G+V P
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLP 81
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.95
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 337 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 265 SKTAVAPIERIKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWRGNFANV 435
S VAP++ +K Q Q + G + + I +G+ +RG +
Sbjct: 19 SSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMM 78
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTRRRSS 528
+ Y P+ ++ F +K K +F GV ++ +S
Sbjct: 79 LGYLPSWSIYFVVYEKCKVLF--GVNKKYTS 107
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 2.2
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 666 GLGNCISKIFKSDGLIGLYRG 728
G+ + + ++KS+GL+GL+RG
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRG 303
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 591 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI-GLYRGSVCPCKVSS 755
++ LD +TR A + +++G+ C S I +G+ GLY G VCP + S
Sbjct: 33 MHSLDTVKTRQQAALYTN----KYNGMVKCYSTILCEEGVFHGLYSG-VCPMLIGS 83
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -2
Query: 657 HAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRS 535
H P R R RD RS +RS R HR DY RS
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRS 177
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 660 FSGLGNCISKIFKSDGLIGLYRGSVCP 740
F + +C K++GL GLYRG P
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLP 76
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +3
Query: 468 RLQGQVQAGVPRRCDKKTQFWRYFXXXXXXXXXXXXTSLCF--VYPLDFART 617
RLQ Q A +P + +FWR F TS+ F P DFA T
Sbjct: 7 RLQPQRFAALPNPVTAENKFWRSFKVPVVAKEYSAITSIHFSAESPYDFAVT 58
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 YEITPNLLFKNQELVFRDPPSACAATPTSTY 165
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC10F6.04 |||RCC domain protein Ats1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 730 EPLYRPIRPSDLKILLMQFPRPENSRW 650
EPLY P+ P L+I F R + RW
Sbjct: 69 EPLYNPLSPDYLRI----FTRVSHERW 91
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 361 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 25.4 bits (53), Expect = 8.9
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 6/92 (6%)
Frame = +1
Query: 238 PGWRYLAA------VSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQG 399
P W Y A + + +AP + IK+ +Q+ S + F +++G
Sbjct: 15 PVWHYTLAGGISSVICRFMIAPFDVIKIRMQITQSSLR-----------PVFKETVQKEG 63
Query: 400 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
+ + WRGN + Y A F K K +
Sbjct: 64 VRALWRGNVVAELLYLVYGAAEFVAFSKLKHL 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,892,170
Number of Sequences: 5004
Number of extensions: 56512
Number of successful extensions: 201
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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