Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021918
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 6e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 53 3e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 46 4e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 42 5e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 5e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.009
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.020
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.047
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.062
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.082
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.082
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.11
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.14
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.25
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.33
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.33
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.58
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 32 0.58
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.3
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.8
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 2.3
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.3
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.3
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 30 2.3
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.1
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 3.1
SB_25454| Best HMM Match : zf-A20 (HMM E-Value=7.5) 29 4.1
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 4.1
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.1
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 29 5.4
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 29 5.4
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.5
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 28 9.5
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 101 bits (242), Expect = 6e-22
Identities = 49/82 (59%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
A +SKTA APIER+KLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 433 VIRYFPTQALNFAFKDKYKQVF 498
IRYFPTQALNFAFKD+ K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +3
Query: 579 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRGSVCPC 743
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLYRG V C
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLYRGFVISC 183
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 501
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
Score = 28.7 bits (61), Expect = 5.4
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +3
Query: 660 FSGLGNCISKIFKSDGLIGLYRGSVCPC 743
+ G+ +C S+ ++S+G + +RG++ C
Sbjct: 53 YKGVIDCTSRTYRSEGFLSFWRGNLANC 80
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/78 (42%), Positives = 56/78 (71%)
Frame = +1
Query: 259 AVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
AVS+T+V+P+ER+K+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 439 RYFPTQALNFAFKDKYKQ 492
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 64.1 bits (149), Expect = 1e-10
Identities = 40/99 (40%), Positives = 59/99 (59%)
Frame = +1
Query: 253 LAAVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
LA VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN AN
Sbjct: 146 LAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGAN 199
Query: 433 VIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGVTSLVI 549
VI+ P + F +K K++ +G T ++ GVT ++
Sbjct: 200 VIKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/79 (25%), Positives = 43/79 (54%)
Frame = +1
Query: 265 SKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 445 FPTQALNFAFKDKYKQVFL 501
P ++ A + K +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 594 YPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 346 YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 591 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
+YPL+ +TRLA + GQ + GL + S I++ +G+ YRG
Sbjct: 248 IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRG 288
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 417
A +SKTA APIER+KLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A ++++ +P+E +K+L QV + G++ F + K +G+ +FW+GN +
Sbjct: 69 AVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNGVSC 121
Query: 436 IRYFPTQALNFA 471
IR FP A+ +A
Sbjct: 122 IRLFPYSAVQYA 133
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 262 VSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
++ V P E IK L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 442 YFP 450
FP
Sbjct: 222 LFP 224
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +1
Query: 259 AVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
A TAV PI+ +K +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 439 RYFPTQALNFAFKDKYKQVF 498
P +A+ D + +F
Sbjct: 983 GVSPEKAIKLTTNDFVRGIF 1002
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRG 976
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Frame = +1
Query: 277 VAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 456
+AP++ +K+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 457 ALNFA----FKDKYKQVF--LGGVTRRRSSGVTSLVIW 552
A+ F D + +F G T + G +V W
Sbjct: 110 AVYFGVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSW 147
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 492
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 594 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +3
Query: 657 EFSGLGNCISKIFKSDGLIGLYRGS 731
++SG+G ++KI++ +GL G ++G+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGN 614
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGSV 734
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G+V
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAV 269
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 265 SKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
+ AV P++ IK LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 445 FP 450
P
Sbjct: 276 AP 277
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 334 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 498
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGSV 734
T+ YPLD R RLA +++++GL N ++I++ +G+ YRG V
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFYRGYV 49
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 262 VSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
++ V P E IK L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 352 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 501
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 274 AVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
A P++ K +Q + I YKG +D RI + +G+ + W+G R P
Sbjct: 110 ASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 454 QALNFAFKDKYKQV---FLGGVT 513
L F F ++ + F GG +
Sbjct: 167 TVLTFIFLEQLNRAANYFYGGTS 189
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 361 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGSV 734
T+ YPLD R+RLA V + G + CIS K G LY+G V
Sbjct: 77 TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKGFV 127
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 364 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 489
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 280 APIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
AP ER+K LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 612 RTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRG 728
R + V K G + + GLG+C+ +++++ GL G+++G
Sbjct: 183 RVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 262 VSKTAVAPIERIKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
+SK + P + IK +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 582 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
+C +P ++ +T+L D + + + G +C+ K K G++GLYRG
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRG 101
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 463 NFAFKDKYKQV 495
F F + K +
Sbjct: 281 FFGFYEFTKNL 291
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRG 728
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRG
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRG 59
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRG 728
TS YPLD R R+ DG + +S N ++ DG+ GLYRG
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRG 169
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 594 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGSVCP 740
+PLD + RL G++ F+G +C K +++G GLY+G P
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKGMAAP 94
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQGLLS 408
A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G+ +
Sbjct: 25 ASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGMKT 84
Query: 409 FWRGNFANVIRYFPTQALNFAFKDKYKQVF 498
++G + R ++ D+ K ++
Sbjct: 85 MYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +1
Query: 238 PGWRYLAAVSKTAVA-----PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 402
P WR+++ + VA P++ ++ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 403 LSFWRGNFANVIRYFP 450
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 597 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRGSVCP 740
PLD + RL A G+ F G +C K + +GL GLY+G + P
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKGMLSP 88
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 463 NF 468
F
Sbjct: 99 TF 100
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSG 531
+P+E +L W G ++VI F A+N F+D+YK++ + R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 459
P++ +K Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 579 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
S YP+D ++ AD G Q +++G +C+ KI+ S G+ +G
Sbjct: 371 SWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQG 422
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 651 QREFSGLGNCISKIFKSDGLIGLYRG 728
Q ++G +C+ K+F S+GL G +RG
Sbjct: 294 QMAYTGSLDCLKKVFHSEGLRGCFRG 319
Score = 29.1 bits (62), Expect = 4.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 660 FSGLGNCISKIFKSDGLIGLYRGSVCP 740
++G+ +C +I K + ++GLY+G P
Sbjct: 191 YNGVFDCFKQIIKRESVLGLYKGMASP 217
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 576 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
TSLC YP + ARTRL + G++++ + + + +G GLY G
Sbjct: 946 TSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGG 994
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 585 CFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRG 728
C P+D RTR G+ + G +CI K + +G++ LY+G
Sbjct: 227 CVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKG 275
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 262 VSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
+ P + +K+ Q + + I YK + AF +I K++G L W G
Sbjct: 127 IGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 142 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWRYLAAVSKTAVAPIERIKLLLQV 315
AA + T P+ DH + N E R G V L V+ +P++ ++
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 316 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSGV 534
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/56 (39%), Positives = 27/56 (48%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHRAHQAAAPSTARQQADRRRPALQ 356
RT+ R + R R + V+RRR DRR T A T R+Q DRRR Q
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRRRTR------ARVTRRRQVDRRRTRAQ 164
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHRAHQAAAPSTARQQADRRR 344
RT+ R + R R + V+ RR DRR T A T+R+Q DRRR
Sbjct: 55 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRR 100
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHR---------AHQAAAPSTARQQADRR 341
RT+ R + R R + V+ RR DRR T + A T+R+Q DRR
Sbjct: 70 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTRARVTIRRQVDRRRTRARVTSRRQVDRR 129
Query: 342 RPALQGYRR 368
R Q RR
Sbjct: 130 RTRAQVTRR 138
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 277 VAPIERIKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 450
+ P E IK LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 265 SKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 423
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 404
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 404
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 404
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 404
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 274 AVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
A+ PIE IK LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 454 QALNFAFKDKYKQVF--LGG 507
Q L+F + ++ LGG
Sbjct: 66 QTLHFTVYEYARKALNPLGG 85
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 358 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 495
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 255 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 124
++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 539 DLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 633 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 511
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ IK+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 463 NFA 471
F+
Sbjct: 117 LFS 119
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 597 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 728
PLD R + + K G + G +C+ +I++ G+ G+Y+G
Sbjct: 157 PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKG 198
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 670 RPENSRWPSPLPTSAARRVRAKSRGYTK 587
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_25454| Best HMM Match : zf-A20 (HMM E-Value=7.5)
Length = 320
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 216 RSRSLRTSWLAVSRRRLQDRRSTHRAHQAAAPSTARQQADRRRPALQGYRRCLRPYPQ 389
+S +L T W RR+ R RA A R+QA+R PA + + R YPQ
Sbjct: 135 QSEALATGW---ERRQ---GRLERRARGTVASDRRREQAERLLPAFKRWATFRRTYPQ 186
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 382 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVTRRRSSG 531
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 404
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 255 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 124
++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1266 DLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 252 SRRRLQDRRSTHRAHQAAAPSTARQQADRRRPALQGYRRCLRP 380
S+ + QD++ST + QA +P ++QQA R+ Q ++ P
Sbjct: 124 SKPQDQDKQSTDQDKQATSPKISKQQAPRQASNKQQDKQATSP 166
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 28.7 bits (61), Expect = 5.4
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Frame = +3
Query: 177 RSHNRTKCRTSPIRSRSLRTSWLAVSRRRLQDR-RSTHRAHQAAAPSTARQQADR--RRP 347
RSH RT C R+RS+ W+ V R Q + R ++ Q A A+ A R RRP
Sbjct: 3308 RSHRRTVC-----RARSI--GWIKVRRAISQGKFREYIKSEQTQAIKMAKFVARRSNRRP 3360
Query: 348 ALQ----GYRRCLRPYPQGAGSPFILAW*LRQR 434
+ G+R+ R QG ++ + +RQR
Sbjct: 3361 VCKARSVGWRKVRRAIDQGNFREYMRSEHIRQR 3393
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 385 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 501
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 31 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 174
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 265 SKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 417
+KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 69 AKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,244,369
Number of Sequences: 59808
Number of extensions: 493937
Number of successful extensions: 1657
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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