Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021918
(760 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 161 9e-42
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 161 9e-42
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 27 0.25
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 161 bits (390), Expect = 9e-42
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
AA+SKT VAPIER+KLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTR 516
IRYFPTQALNFAFKDKYKQVFLGGV +
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDK 107
Score = 110 bits (265), Expect = 1e-26
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +3
Query: 510 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 689
DK TQF RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++K
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTK 165
Query: 690 IFKSDGLIGLYRG 728
IFK+DG+ GLYRG
Sbjct: 166 IFKADGITGLYRG 178
Score = 39.5 bits (88), Expect = 3e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 197 MSNLADPVAFAKDFLAGGI 253
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.9 bits (59), Expect = 0.11
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 594 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGS 731
YP D R R+ G+ + + +C + I+K++G ++G+
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGA 276
Score = 27.1 bits (57), Expect = 0.19
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
P + ++ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 25.8 bits (54), Expect = 0.44
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 728 FGVSVQGIIIY 760
FGVSVQGIIIY
Sbjct: 179 FGVSVQGIIIY 189
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 343 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 480
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 161 bits (390), Expect = 9e-42
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +1
Query: 256 AAVSKTAVAPIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
AA+SKT VAPIER+KLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 436 IRYFPTQALNFAFKDKYKQVFLGGVTR 516
IRYFPTQALNFAFKDKYKQVFLGGV +
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDK 107
Score = 110 bits (265), Expect = 1e-26
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +3
Query: 510 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISK 689
DK TQF RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++K
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTK 165
Query: 690 IFKSDGLIGLYRG 728
IFK+DG+ GLYRG
Sbjct: 166 IFKADGITGLYRG 178
Score = 39.5 bits (88), Expect = 3e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 197 MSNLADPVAFAKDFLAGGI 253
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.9 bits (59), Expect = 0.11
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 594 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGS 731
YP D R R+ G+ + + +C + I+K++G ++G+
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGA 276
Score = 27.1 bits (57), Expect = 0.19
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +1
Query: 283 PIERIKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
P + ++ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 25.8 bits (54), Expect = 0.44
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 728 FGVSVQGIIIY 760
FGVSVQGIIIY
Sbjct: 179 FGVSVQGIIIY 189
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 343 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 480
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 26.6 bits (56), Expect = 0.25
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 600 GGTRSTERWLRRHHRRPDYQRSNARTASSCH 508
G T ST+ L+RH + +Q N+ + CH
Sbjct: 378 GKTLSTKLTLKRHKEQQHFQPLNSAVCALCH 408
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,739
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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