Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021917X
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.43 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   5.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.1  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 0.43
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 338 PGPNGTVRATRRPNATEHGQHGSPRDRAESAERADL 445
           PG    +    RP AT+H +   P+    + +R ++
Sbjct: 306 PGEKTNIAPRERPRATDHQRRNEPKRPRPNIDRHEV 341


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -2

Query: 191 AGSRLVTLTSFILFIVARFFTQPGSVSNLPSNDTDPILCINMACNGGSSRTSRQ 30
           AGS L+  ++ ++  +A   +  G  +N+PSN        + +  GG S + RQ
Sbjct: 49  AGSNLLCASNGLVTTLASGSSLNGLTNNVPSNGLSSSGPFS-SIGGGISASKRQ 101


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 37  EVLELPPLHAMFMHKIGSVSFD 102
           E+ + P +   F HK+ SVSF+
Sbjct: 120 ELEKYPNVKIYFNHKLMSVSFE 141


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 37  EVLELPPLHAMFMHKIGSVSFD 102
           E+ + P +   F HK+ SVSF+
Sbjct: 120 ELEKYPNVKIYFNHKLMSVSFE 141


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 37  EVLELPPLHAMFMHKIGSVSFD 102
           E+ + P +   F HK+ SVSF+
Sbjct: 120 ELEKYPNVKIYFNHKLMSVSFE 141


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -2

Query: 182 RLVTLTSFILFIVARFFTQPGSVSNLPSNDTDPILCINMACNGGSS 45
           RL T+ + +LF V  +++    ++ +       +L ++ A  GGS+
Sbjct: 297 RLFTIDNKLLFGVLAYYSTTCDIATILDFWVRCVLSLHCAAVGGSA 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,456
Number of Sequences: 336
Number of extensions: 1964
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)