Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021917X
(450 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051589-1|AAK93013.1| 564|Drosophila melanogaster GH23387p pro... 30 1.7
AE014134-2963|AAF53693.2| 564|Drosophila melanogaster CG10341-P... 30 1.7
Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein. 29 2.2
AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein. 29 2.2
AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin ... 29 2.2
AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin ... 29 2.2
AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin ... 29 2.2
AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin ... 29 2.2
AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB... 29 2.2
AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA... 29 2.2
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 28 5.0
AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,... 28 5.0
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 28 5.0
AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein. 28 5.0
AE014296-1294|AAS65060.1| 1876|Drosophila melanogaster CG33275-P... 28 6.7
AY075335-1|AAL68201.1| 475|Drosophila melanogaster GH14278p pro... 27 8.8
AE014134-3247|AAF53897.1| 475|Drosophila melanogaster CG2493-PA... 27 8.8
>AY051589-1|AAK93013.1| 564|Drosophila melanogaster GH23387p
protein.
Length = 564
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +2
Query: 224 RTCRSVTTNTD*SDXXXXXXXXXXXXXXXXPAPRRHHRPGPNGTVRATRRPNATEHGQHG 403
R R T +TD D P PR+ R G + R ++RP+ +H Q+
Sbjct: 418 RRQRDRTNSTDSVDTVTSVATTATKASSVAPPPRQRGRRGQRESFRQSQRPSINQHNQN- 476
Query: 404 SPRD 415
P+D
Sbjct: 477 QPQD 480
>AE014134-2963|AAF53693.2| 564|Drosophila melanogaster CG10341-PA
protein.
Length = 564
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = +2
Query: 224 RTCRSVTTNTD*SDXXXXXXXXXXXXXXXXPAPRRHHRPGPNGTVRATRRPNATEHGQHG 403
R R T +TD D P PR+ R G + R ++RP+ +H Q+
Sbjct: 418 RRQRDRTNSTDSVDTVTSVATTATKASSVAPPPRQRGRRGQRESFRQSQRPSINQHNQN- 476
Query: 404 SPRD 415
P+D
Sbjct: 477 QPQD 480
>Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 877 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 913
>AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 877 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 913
>AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 877 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 913
>AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin
protein.
Length = 1349
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 861 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 897
>AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin
protein.
Length = 1349
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 861 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 897
>AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 877 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 913
>AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB,
isoform B protein.
Length = 1123
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 635 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 671
>AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA,
isoform A protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFE 114
+M RT L C+E PLH++ M I + F+G E
Sbjct: 877 HMLRTTLHMCKEAAPTLPLHSICMQFISADFFEGVIE 913
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 76 HKIGSVSFDGKFETDPGWVKNL---ATINRINDVSVTRRDPAKTSFHVTLRIK 225
+K+GS+ + + P ++NL TI + DVSVT PA+ VT ++K
Sbjct: 4680 NKLGSIQTSAQLKVRP--IENLDAPPTITALKDVSVTEGMPAQFKTTVTGKVK 4730
>AE014296-406|AAF47604.1| 4796|Drosophila melanogaster CG1915-PA,
isoform A protein.
Length = 4796
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 76 HKIGSVSFDGKFETDPGWVKNL---ATINRINDVSVTRRDPAKTSFHVTLRIK 225
+K+GS+ + + P ++NL TI + DVSVT PA+ VT ++K
Sbjct: 4680 NKLGSIQTSAQLKVRP--IENLDAPPTITALKDVSVTEGMPAQFKTTVTGKVK 4730
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 76 HKIGSVSFDGKFETDPGWVKNL---ATINRINDVSVTRRDPAKTSFHVTLRIK 225
+K+GS+ + + P ++NL TI + DVSVT PA+ VT ++K
Sbjct: 4680 NKLGSIQTSAQLKVRP--IENLDAPPTITALKDVSVTEGMPAQFKTTVTGKVK 4730
>AB026845-1|BAA90301.2| 4796|Drosophila melanogaster kettin protein.
Length = 4796
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 76 HKIGSVSFDGKFETDPGWVKNL---ATINRINDVSVTRRDPAKTSFHVTLRIK 225
+K+GS+ + + P ++NL TI + DVSVT PA+ VT ++K
Sbjct: 4680 NKLGSIQTSAQLKVRP--IENLDAPPTITALKDVSVTEGMPAQFKTTVTGKVK 4730
>AE014296-1294|AAS65060.1| 1876|Drosophila melanogaster CG33275-PA,
isoform A protein.
Length = 1876
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 213 SDVEASLGRITPGHADIVYPVY 148
+DV+A+L R+ H +YPVY
Sbjct: 317 ADVDATLARLIDSHLSHIYPVY 338
>AY075335-1|AAL68201.1| 475|Drosophila melanogaster GH14278p
protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 243 RRIPIKAMGVSCSGRLAAAFNSCSLHLAVTIGLAQTEPYAQLDDLT 380
R++P+ A G S G LAA F HL V LA + P Q +T
Sbjct: 156 RQMPVVAFGGSYGGMLAAWFRMKYPHL-VNGALAASAPVLQFPGIT 200
>AE014134-3247|AAF53897.1| 475|Drosophila melanogaster CG2493-PA
protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 243 RRIPIKAMGVSCSGRLAAAFNSCSLHLAVTIGLAQTEPYAQLDDLT 380
R++P+ A G S G LAA F HL V LA + P Q +T
Sbjct: 156 RQMPVVAFGGSYGGMLAAWFRMKYPHL-VNGALAASAPVLQFPGIT 200
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,498,518
Number of Sequences: 53049
Number of extensions: 406106
Number of successful extensions: 1362
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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