Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021917X
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z82052-5|CAB04828.1| 382|Caenorhabditis elegans Hypothetical pr... 27 4.8
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 27 6.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 27 8.3
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 27 8.3
AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 382 SVRSSSCAYGSVWARPMVTARCREQELKAAASLPEQD 272
+VR +SC SVW + ++ AR +E+ ++ S P +
Sbjct: 1111 NVRLASCEALSVWRKTLIAARAQERRGQSPISSPASE 1147
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 382 SVRSSSCAYGSVWARPMVTARCREQELKAAASLPEQD 272
+VR +SC SVW + ++ AR +E+ ++ S P +
Sbjct: 1237 NVRLASCEALSVWRKTLIAARAQERRGQSPISSPASE 1273
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 382 SVRSSSCAYGSVWARPMVTARCREQELKAAASLPEQD 272
+VR +SC SVW + ++ AR +E+ ++ S P +
Sbjct: 1111 NVRLASCEALSVWRKTLIAARAQERRGQSPISSPASE 1147
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 382 SVRSSSCAYGSVWARPMVTARCREQELKAAASLPEQD 272
+VR +SC SVW + ++ AR +E+ ++ S P +
Sbjct: 1237 NVRLASCEALSVWRKTLIAARAQERRGQSPISSPASE 1273
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 27.9 bits (59), Expect = 3.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 173 TLTSFILFIVARFFTQPGSVSNLPSN 96
TL S+++F++ + +PG V +P N
Sbjct: 881 TLASYVMFVLKNEYMKPGDVGFIPEN 906
>Z82052-5|CAB04828.1| 382|Caenorhabditis elegans Hypothetical
protein T25E12.10 protein.
Length = 382
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 206 WKLVLAG-SRLVTLTSFILFIVARFFTQPGSVSNLPSNDTDPILCINMACNGGSSRTS 36
WKL+L G L+ L I+F + FF + LP T P + + SSRTS
Sbjct: 38 WKLILLGILNLIFLIIAIVFAIL-FFVGSADCAQLPDYTTSP--ASQLTTSAISSRTS 92
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 338 AYGDGEVQGARVE-GGRESAGAGHAHRFNR 252
++G G + R GGR +AG H HR NR
Sbjct: 16 SHGHGRIGKHRKHPGGRGNAGGQHHHRINR 45
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 274 PAPADSRPPSTLAPCTSPSP 333
PAP PP+ APC P P
Sbjct: 106 PAPCCPPPPAPAAPCCPPPP 125
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 124 GWVKNLATINRINDVSVTRRDPAKTSFHVTLRIKDLQIGYDEYRLKRWACPAPADSRPPS 303
G + +L +++R++ + + P +K + G + R +R PAP S P +
Sbjct: 169 GLINHLNSVDRMHTEAAIEK-PTYNRDETAKIVKSILTG-EGIRSQRTMAPAPPSSAPMT 226
Query: 304 TLAPCTSPS 330
T T PS
Sbjct: 227 TAPSSTGPS 235
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 124 GWVKNLATINRINDVSVTRRDPAKTSFHVTLRIKDLQIGYDEYRLKRWACPAPADSRPPS 303
G + +L +++R++ + + P +K + G + R +R PAP S P +
Sbjct: 169 GLINHLNSVDRMHTEAAIEK-PTYNRDETAKIVKSILTG-EGIRSQRTMAPAPPSSAPMT 226
Query: 304 TLAPCTSPS 330
T T PS
Sbjct: 227 TAPSSTGPS 235
>AL023858-2|CAE18058.1| 158|Caenorhabditis elegans Hypothetical
protein ZK285.2 protein.
Length = 158
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 344 GQAYGDGEVQGARVEGGRESAGAGHAHRFNR 252
G A G G GA GG +G+G+ +FNR
Sbjct: 90 GGAGGAGGAGGAGGAGGSGGSGSGNGMKFNR 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,990,078
Number of Sequences: 27780
Number of extensions: 191170
Number of successful extensions: 591
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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