Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021917X
(450 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17430.1 68415.m02011 seven transmembrane MLO family protein ... 29 1.5
At5g66670.1 68418.m08404 hypothetical protein contains Pfam:PF05... 28 2.5
At4g15890.1 68417.m02415 expressed protein 28 2.5
At3g22830.1 68416.m02877 heat shock transcription factor family ... 27 4.4
At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR... 27 5.9
At5g51920.1 68418.m06441 expressed protein ; expression supporte... 27 7.7
At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR... 27 7.7
At4g19050.1 68417.m02806 mob1/phocein family protein contains Pf... 27 7.7
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 7.7
>At2g17430.1 68415.m02011 seven transmembrane MLO family protein /
MLO-like protein 7 (MLO7) identical to membrane protein
Mlo7 [Arabidopsis thaliana] gi|14091584|gb|AAK53800;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 542
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 237 RLRRIPIKAMGVSCSGRLAAAFNSCSLHLAVTIGLAQTEPYAQLDD 374
+ R++P K +GVS S L+++ ++ +LH + T G + Y + +D
Sbjct: 468 KARKLPSKTLGVSESFSLSSSSSATTLHRSKTTGHSSNIIYYKQED 513
>At5g66670.1 68418.m08404 hypothetical protein contains
Pfam:PF05055: Protein of unknown function (DUF677)
Length = 408
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 209 TWKLVLAGSRLVT--LTSFILFIVARFFTQPGSVSNLPSNDTDPILCINMACN 57
TW+ +L+ T +T F+L +VA P +S + S T PI + M CN
Sbjct: 232 TWR-ILSNVVFATAFVTVFVLSVVAAAMMAPPVLSAVASGLTTPIEVVGMWCN 283
>At4g15890.1 68417.m02415 expressed protein
Length = 1314
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 267 GVSCSGRLAAAFNSCSLHLAVTIGLA-QTEPYAQLDDLTLQSMDNMDLH 410
GV C+ A C L + L EP A L D L+ ++N +LH
Sbjct: 675 GVECNSSTWAGDRVCLLQTISNVSLQLPAEPAADLADNLLKKIENFNLH 723
>At3g22830.1 68416.m02877 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 406
Score = 27.5 bits (58), Expect = 4.4
Identities = 9/40 (22%), Positives = 20/40 (50%)
Frame = +3
Query: 303 NSCSLHLAVTIGLAQTEPYAQLDDLTLQSMDNMDLHVTGL 422
N + + IG++Q Y + + + +D + +H+ GL
Sbjct: 289 NDVAASSSALIGMSQEYTYGNMSEFEMSELDKLAMHIQGL 328
>At3g44400.1 68416.m04770 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELPPL-HAMFMHKIGSVSFDGKFETDPGWVKNLATI 150
N++ L+NC V+ELP + +A + ++ + E WVK ++ +
Sbjct: 764 NLQELSLRNCSRVVELPAIENATNLRELKLQNCSSLIELPLSWVKRMSRL 813
>At5g51920.1 68418.m06441 expressed protein ; expression supported
by MPSS
Length = 570
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 274 PAPADSRPPSTLAPCTSPSP 333
P P DS PP+ L C S SP
Sbjct: 4 PFPGDSSPPNCLHGCFSSSP 23
>At5g41740.1 68418.m05076 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 26.6 bits (56), Expect = 7.7
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 4 NMRRTLLQNCREVLELP-PLHAMFMHKIGSVSFDGKFETDPGWVKNLATINRINDVSVTR 180
N+ R L++C ++ELP + + +I V F + P + NLA++ R+ DVS
Sbjct: 636 NLERLTLESCLSLVELPSSISNLHKLEILDVKFCSMLQVIPTNI-NLASLERL-DVSGCS 693
Query: 181 RDPAKTSFHVTLRIKDLQIG 240
R +T ++ IK L G
Sbjct: 694 R--LRTFPDISSNIKTLIFG 711
>At4g19050.1 68417.m02806 mob1/phocein family protein contains Pfam
PF03637: Mob1/phocein family; contains Pfam F00560:
Leucine Rich Repeats; contains TIGRFAMS profile
TIGR01612: reticulocyte binding protein; hypothetical
protein YIL106w, Saccharomyces cerevisiae, PIR2:S48466
Length = 1405
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 1 INMRRTLLQNCREVLELPPLHAMFMHKIGSVSFDGKFETDPGWVKNLATINRIN 162
+N+ + LL+NC + ELP + + ++ VS K + G ++ ++ +N
Sbjct: 702 VNLNKLLLRNCSLIEELPSIEKLTHLEVFDVSGCIKLKNINGSFGEMSYLHEVN 755
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 274 PAPADSRPPSTLAPCTSPSP 333
P P S P S+L+P SPSP
Sbjct: 70 PPPPSSSPLSSLSPSLSPSP 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,527,583
Number of Sequences: 28952
Number of extensions: 182200
Number of successful extensions: 670
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -