Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021913
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0154 + 1020650-1022050,1022304-1022373,1022496-1022617,102... 105 4e-23
03_02_0579 - 9606317-9606892,9607571-9607799,9607902-9608011,960... 105 4e-23
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 89 3e-18
12_01_0237 + 1782593-1782778,1784942-1784996,1785086-1787028,178... 46 3e-05
11_01_0240 + 1852186-1852371,1854183-1854237,1854391-1856267,185... 44 8e-05
05_05_0338 + 24204301-24206262,24206337-24206495,24206864-242070... 43 2e-04
04_04_1073 - 30606472-30606515,30606897-30606988,30607152-306072... 42 4e-04
02_01_0570 - 4195409-4195443,4196245-4196333,4196539-4196630,419... 42 4e-04
12_02_0932 + 24519204-24519380,24520074-24520128,24520251-245222... 40 0.001
03_05_0325 + 23135816-23135894,23136161-23136333,23136440-231366... 40 0.002
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 40 0.002
03_02_0069 + 5401789-5401965,5403514-5403568,5403674-5405649,540... 39 0.004
10_08_0019 - 14167952-14171059 38 0.005
08_02_1257 - 25646029-25646054,25646139-25646236,25646609-256467... 36 0.021
07_03_0004 - 12260322-12261432,12261691-12261821,12262386-122624... 30 1.4
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 29 2.4
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 29 3.1
11_06_0002 + 19154489-19155172,19155260-19155298 28 5.5
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 28 5.5
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 28 7.2
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 28 7.2
09_06_0309 - 22206812-22206884,22207008-22207103,22207531-222076... 27 9.6
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 27 9.6
01_06_0425 + 29264714-29266135 27 9.6
>05_01_0154 +
1020650-1022050,1022304-1022373,1022496-1022617,
1022753-1023031,1023402-1023779,1024079-1024188,
1024394-1024622,1024725-1025303
Length = 1055
Score = 105 bits (251), Expect = 4e-23
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYM 176
LG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM KPPRK+D+ LI+ W+ FRY+
Sbjct: 806 LGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRKSDDSLITPWILFRYL 863
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = +2
Query: 353 TMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYSRF 517
T++LSVLV IEM N++N+LSE+ SL+ MPPW N WL+ +M++SF LHF+ILY F
Sbjct: 947 TLSLSVLVAIEMFNSLNALSEDTSLLRMPPWVNPWLLLAMSVSFGLHFLILYVPF 1001
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1
Query: 517 LSAVFQVTPLSLDEWVTVMKVSVPVVLLDEVLKFVAR 627
L+ VF + PLSL+EW+ V+ V++PVVL+DEVLKFV R
Sbjct: 1002 LAQVFGIVPLSLNEWLLVLLVALPVVLIDEVLKFVGR 1038
>03_02_0579 -
9606317-9606892,9607571-9607799,9607902-9608011,
9608898-9609275,9609380-9609658,9610044-9610168,
9610269-9610335,9610582-9612006
Length = 1062
Score = 105 bits (251), Expect = 4e-23
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYM 176
LG+PE LIPVQLLWVNLVTDG PATALGFNPPD DIM KPPR++D+ LI+ W+ FRYM
Sbjct: 814 LGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITPWILFRYM 871
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/55 (60%), Positives = 46/55 (83%)
Frame = +2
Query: 353 TMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYSRF 517
T++LSVLV IEM N++N+LSE+ SL++MPPW N WL+ +M++SF LHF+ILY F
Sbjct: 955 TLSLSVLVAIEMFNSLNALSEDGSLLSMPPWVNPWLLLAMSVSFGLHFLILYVPF 1009
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 517 LSAVFQVTPLSLDEWVTVMKVSVPVVLLDEVLKFVAR 627
L+ VF + PLS +EW+ V+ V+ PVVL+DEVLKFV R
Sbjct: 1010 LAQVFGIVPLSFNEWLLVIAVAFPVVLIDEVLKFVGR 1046
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 89.0 bits (211), Expect = 3e-18
Identities = 36/62 (58%), Positives = 49/62 (79%)
Frame = +2
Query: 323 CKVFTDPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVI 502
C +F D HP T++++VLV +EM NA+N+LSENQSL+ + PWSNLWLVGS+ L+ LH +
Sbjct: 1106 CSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLAIHPWSNLWLVGSIVLTMLLHISV 1165
Query: 503 LY 508
LY
Sbjct: 1166 LY 1167
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPR 128
LG+P+ L+PVQLLWVNLVTDGLPATA+GFN PD +IM PR
Sbjct: 825 LGMPDTLVPVQLLWVNLVTDGLPATAIGFNKPDSNIMTVKPR 866
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 129 KADEGLISGWLFFRYMXXXXXXXXXXXXXXSWWFMYSPYGPQ 254
+ +E +++GWLFFRY+ WWF+YS GP+
Sbjct: 999 EVNEAVVNGWLFFRYLIIGAYVGLATIAGFVWWFVYSEDGPR 1040
>12_01_0237 +
1782593-1782778,1784942-1784996,1785086-1787028,
1787103-1787261,1787432-1787603,1787705-1788003,
1788278-1788583
Length = 1039
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYM 176
L VQLLWVN++ D L A AL PP+ ++M +PP + E I+ +++ M
Sbjct: 843 LTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIM 894
>11_01_0240 +
1852186-1852371,1854183-1854237,1854391-1856267,
1856342-1856500,1856692-1856863,1856965-1857263,
1857539-1857844
Length = 1017
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVN++ D L A AL PP+ ++M +PP + E I+
Sbjct: 821 LTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFIT 864
>05_05_0338 +
24204301-24206262,24206337-24206495,24206864-24207035,
24207544-24207842,24208301-24208355,24208438-24208487,
24208522-24208827
Length = 1000
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVN++ D L A AL PP+ ++M +PP + + I+
Sbjct: 769 LTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGDNFIT 812
>04_04_1073 - 30606472-30606515,30606897-30606988,30607152-30607243,
30607362-30607469,30607614-30607748,30607826-30607871,
30608320-30608420,30608512-30608649,30608721-30608819,
30608920-30609036,30609941-30610102,30610271-30610330,
30611120-30611216,30611238-30611296,30611364-30611480,
30611922-30612020,30612115-30612180,30612405-30612542,
30612659-30612742,30612820-30612892,30612937-30612992,
30613074-30613182,30613253-30613335,30613406-30613489,
30613679-30613750,30613827-30613904,30613984-30614067,
30614142-30614212,30614497-30614566,30614866-30614955,
30615046-30615177,30615250-30615350,30615634-30615691,
30615762-30615878,30617981-30618133
Length = 1094
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +3
Query: 30 VQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
VQLLWVNL+ D L A AL PP +M +PP E LI+
Sbjct: 888 VQLLWVNLIMDTLGALALATEPPTDHLMQRPPVGRREPLIT 928
>02_01_0570 -
4195409-4195443,4196245-4196333,4196539-4196630,
4196726-4196833,4196984-4197118,4197211-4197256,
4197358-4197458,4198285-4198422,4198503-4198601,
4198740-4198856,4199195-4199356,4199734-4199793,
4200371-4200538,4200608-4200718,4201401-4201499,
4201579-4201644,4202407-4202490,4202563-4202605,
4202684-4202739,4202817-4202925,4203442-4203524,
4203842-4203925,4204311-4204382,4204462-4204539,
4204633-4204716,4204806-4204876,4205943-4206012,
4206495-4206626,4207168-4207284,4208185-4208367
Length = 963
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 30 VQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
VQLLWVNL+ D L A AL PP +M +PP E L++
Sbjct: 761 VQLLWVNLIMDTLGALALATEPPTDQLMKRPPVGRKEPLVT 801
>12_02_0932 +
24519204-24519380,24520074-24520128,24520251-24522202,
24522288-24522446,24522878-24523049,24523131-24523429,
24524037-24524285
Length = 1020
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ D+M + P
Sbjct: 843 LTAVQLLWVNMIMDTLGALALATEPPNDDLMKREP 877
>03_05_0325 + 23135816-23135894,23136161-23136333,23136440-23136613,
23136881-23137004,23137090-23137190,23137337-23137423,
23137801-23137896,23138209-23138329,23138475-23138603,
23139458-23139549,23139660-23139771,23140189-23140541,
23140670-23140899,23141179-23141278,23143357-23143411,
23143548-23145496,23145587-23145745,23146514-23146685,
23146758-23147056,23147246-23147521
Length = 1626
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ ++M K P
Sbjct: 1440 LTAVQLLWVNMIMDTLGALALATEPPNNNLMKKAP 1474
>01_07_0124 +
41212728-41212922,41215156-41215210,41215336-41217128,
41217363-41217521,41217883-41218054,41218173-41218471,
41219060-41219368
Length = 993
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 30 VQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
VQLLWVNL+ D L A AL PP+ +M +PP
Sbjct: 799 VQLLWVNLIMDTLGALALATEPPNDAMMKRPP 830
>03_02_0069 +
5401789-5401965,5403514-5403568,5403674-5405649,
5405710-5405868,5406081-5406252,5406617-5406915,
5407147-5407392
Length = 1027
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ ++M + P
Sbjct: 851 LTAVQLLWVNMIMDTLGALALATEPPNDELMKRTP 885
>10_08_0019 - 14167952-14171059
Length = 1035
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVNL+ D + A AL + P +M +PP LIS
Sbjct: 846 LTTVQLLWVNLIMDTMGALALATDTPTAGLMRRPPIGRAAPLIS 889
>08_02_1257 -
25646029-25646054,25646139-25646236,25646609-25646700,
25646786-25646893,25647212-25647346,25647648-25647752,
25647951-25648088,25648865-25648963,25649079-25649195,
25649446-25649610,25649955-25650014,25650395-25650559,
25650636-25650746,25651220-25651333,25651466-25651531,
25651857-25651994,25652303-25652386,25652468-25652510,
25652621-25652676,25652772-25652880,25652944-25653026,
25653127-25653210,25653383-25653454,25653557-25653634,
25653717-25653800,25653892-25653962,25654095-25654164,
25654314-25654403,25654500-25654661,25654702-25654817,
25654946-25654988,25655069-25655185,25655897-25656046
Length = 1082
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 30 VQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
V+LLWVNL+ D L A AL PP ++M + P
Sbjct: 894 VELLWVNLIMDTLGALALATEPPTDNLMKRQP 925
>07_03_0004 -
12260322-12261432,12261691-12261821,12262386-12262491,
12262777-12262875,12262960-12263312,12263593-12263619
Length = 608
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 462 SAPWRSP-SLFISSSSTRGSFGRVPSDAAVARRVGNRNEGLSTRG 593
+A WR P S S++ R SFG D ++ G+ NEGL +G
Sbjct: 442 AASWRKPVSCNGSNNHRRESFGSESDDGIISDLDGDINEGLKCKG 486
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 568 RLPTRRATAASLGTRPKEPRVEDDEMKSEGERHGADEPQV*PGRHGDQ 425
R P R A+ R+ D +E + A EPQV G H Q
Sbjct: 195 RRPLREREEAAAAAAAAAKRIHDHHTPAESKAEAASEPQVSAGDHSTQ 242
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 66 LPATALGFNPPDLDIMDKPPRKADEGLISG 155
+P AL + DL++ K RKAD GL+SG
Sbjct: 432 IPEVALYNSKADLEVKCKEMRKADIGLVSG 461
>11_06_0002 + 19154489-19155172,19155260-19155298
Length = 240
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 2 SGSARSSDPRPTAVGEPGH*RSAR----YRPRIQSSRSRHHGQAPSQ 130
+ + R + PRP P H ++ YRPR+ S HHG+A Q
Sbjct: 48 AAAPRRTRPRPFIYRVPNHIKNMTNPDAYRPRLVSLGPFHHGEAELQ 94
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 595 VPRVLRPSLRLPTRRATAASLGTRPK-EPRVEDDEMKSEGERHG-ADEPQV*PGRHGDQR 422
VP L+ S + P+R + G RP+ PR E D + G+R G P+ PG G ++
Sbjct: 87 VPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEGDRPRF-GDRDGYRGGPRGAPGDFGGEK 145
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 595 VPRVLRPSLRLPTRRATAASLGTRPK-EPRVEDDEMKSEGERHG-ADEPQV*PGRHGDQR 422
VP L+ S R P R + G RP+ PR E D + G+R G P+ PG G ++
Sbjct: 87 VPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRF-GDRDGYRGGPRGAPGDFGGEK 145
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -2
Query: 595 VPRVLRPSLRLPTRRATAASLGTRPK-EPRVEDDEMKSEGERHG-ADEPQV*PGRHGDQR 422
VP L+ S R P R + G RP+ PR E D + G+R G P+ PG G ++
Sbjct: 87 VPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRF-GDRDGYRGGPRGAPGDFGGEK 145
>09_06_0309 -
22206812-22206884,22207008-22207103,22207531-22207619,
22207738-22207820,22207932-22208048,22208132-22208319,
22208430-22208500,22208570-22208782,22210022-22210081,
22210186-22210476,22210590-22211894
Length = 861
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 404 SLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYSRFFRPCSK*RR 544
S E +V +PPW++L +S LH ++RF C RR
Sbjct: 26 SEEEEHVVVVVPPWADLPFDLLADISRRLHATADFARFHAVCKSWRR 72
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 450 TCGSSAPWRSPSLFISSSSTRGSFGRVPSDAAVARRVGNRNEGLSTRGTAG 602
+C AP + F ++ R FG +PS AAVA G R G G G
Sbjct: 45 SCSIRAPLQGRGSFRRGANIR--FGSLPSSAAVATSGGGRGGGGVVVGGGG 93
>01_06_0425 + 29264714-29266135
Length = 473
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 429 SPCRPGQTCGSSAPWRSPSLFISSSSTR 512
SP RP Q G APW +P L + ++ R
Sbjct: 249 SPGRPSQPMGCDAPW-TPRLVVQTTPVR 275
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,489,918
Number of Sequences: 37544
Number of extensions: 436195
Number of successful extensions: 1326
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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