Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021913
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.0  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.2  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 505  EDDEMKSEGERHGADE 458
            EDDE +  G+RH AD+
Sbjct: 1170 EDDEEEGSGDRHRADD 1185


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = -2

Query: 541  ASLGTRPKEPRVEDDEMKSEGERHGADEPQV*PGRHGDQRLVLRQAV--HGV*HLDCDQH 368
            AS G +P   R E  E +S    H AD  QV       ++ +  QA+  H + H DCD  
Sbjct: 839  ASRGAKPHRSRCEATEARS----HLADS-QV-----KKEQQITSQALPPHSM-HTDCDYE 887

Query: 367  *ESHR 353
             ESH+
Sbjct: 888  PESHK 892


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/33 (21%), Positives = 19/33 (57%)
 Frame = +2

Query: 392 NAMNSLSENQSLVTMPPWSNLWLVGSMALSFTL 490
           + ++   EN+S+    P++++W   ++ + F L
Sbjct: 165 DGLSMRDENESITPFAPYTSIWSSPTVYICFAL 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,503
Number of Sequences: 2352
Number of extensions: 14154
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)