Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021913
(641 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10130.1 68414.m01142 calcium-transporting ATPase 3, endoplas... 110 9e-25
At1g07810.1 68414.m00846 calcium-transporting ATPase 1, endoplas... 107 8e-24
At1g07670.1 68414.m00824 calcium-transporting ATPase 4, endoplas... 105 2e-23
At4g00900.1 68417.m00122 calcium-transporting ATPase 2, endoplas... 99 2e-21
At5g57110.2 68418.m07131 calcium-transporting ATPase 8, plasma m... 43 2e-04
At5g57110.1 68418.m07130 calcium-transporting ATPase 8, plasma m... 43 2e-04
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 42 3e-04
At1g27770.2 68414.m03396 calcium-transporting ATPase 1, plasma m... 40 0.001
At1g27770.1 68414.m03395 calcium-transporting ATPase 1, plasma m... 40 0.001
At3g22910.1 68416.m02887 calcium-transporting ATPase, plasma mem... 39 0.003
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 39 0.003
At3g21180.1 68416.m02677 calcium-transporting ATPase, plasma mem... 38 0.004
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 38 0.006
At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma mem... 38 0.006
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 38 0.006
At3g63380.1 68416.m07135 calcium-transporting ATPase, plasma mem... 37 0.010
At2g36680.2 68415.m04500 expressed protein 30 1.1
At2g36680.1 68415.m04499 expressed protein 30 1.1
At3g53120.1 68416.m05854 expressed protein 29 2.6
At5g42470.1 68418.m05170 expressed protein low similarity to BRE... 28 4.6
At5g40450.1 68418.m04905 expressed protein 28 4.6
At1g56190.1 68414.m06458 phosphoglycerate kinase, putative simil... 28 6.1
At1g02780.1 68414.m00233 60S ribosomal protein L19 (RPL19A) simi... 28 6.1
At5g05740.2 68418.m00632 peptidase M50 family protein / sterol-r... 27 8.0
At5g05740.1 68418.m00631 peptidase M50 family protein / sterol-r... 27 8.0
At1g05830.1 68414.m00610 trithorax protein, putative / PHD finge... 27 8.0
>At1g10130.1 68414.m01142 calcium-transporting ATPase 3, endoplasmic
reticulum-type (ACA6) (ECA3) nearly identical to
SP|Q9SY55 Calcium-transporting ATPase 3, endoplasmic
reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana);
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 998
Score = 110 bits (264), Expect = 9e-25
Identities = 54/112 (48%), Positives = 68/112 (60%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYMXX 182
LG+P+ L PVQLLWVNLVTDGLPATA+GFN D D+M PRK E +++GWLFFRY+
Sbjct: 770 LGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVGEAVVTGWLFFRYLVI 829
Query: 183 XXXXXXXXXXXXSWWFMYSPYGPQ*HTGNSLITYNVSAVVMNLRVLTAKCSL 338
WWF+YS GP+ T + L+ + A LR T CS+
Sbjct: 830 GVYVGLATVAGFIWWFVYSDGGPK-LTYSELMNFETCA----LRETTYPCSI 876
Score = 85.8 bits (203), Expect = 2e-17
Identities = 37/62 (59%), Positives = 49/62 (79%)
Frame = +2
Query: 323 CKVFTDPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVI 502
C +F D HP T+A++VLV +EM NA+N+LSENQSL+ + P SNLWLVGS+ L+ LH +I
Sbjct: 874 CSIFEDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVITPRSNLWLVGSIILTMLLHVLI 933
Query: 503 LY 508
LY
Sbjct: 934 LY 935
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +1
Query: 466 LHGALLHSSFRHPLL---EVLSAVFQVTPLSLDEWVTVMKVSVPVVLLDEVLKFVAR 627
L G+++ + H L+ L+ +F VTPLS EW V+ +S PV+++DE+LKF++R
Sbjct: 919 LVGSIILTMLLHVLILYVHPLAVLFSVTPLSWAEWTAVLYLSFPVIIIDELLKFLSR 975
>At1g07810.1 68414.m00846 calcium-transporting ATPase 1, endoplasmic
reticulum-type (ECA1) identical to SP|P92939
Calcium-transporting ATPase 1, endoplasmic reticulum-type
(EC 3.6.3.8) {Arabidopsis thaliana); contains InterPro
Accession IPR006069: Cation transporting ATPase
Length = 1061
Score = 107 bits (256), Expect = 8e-24
Identities = 50/97 (51%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYMXX 182
LG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPR++D+ LI+ W+ FRYM
Sbjct: 810 LGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITAWILFRYMVI 869
Query: 183 XXXXXXXXXXXXSWWFMYSPYG--PQ*HTGNSLITYN 287
W+ +S + G+SL++Y+
Sbjct: 870 GLYVGVATVGVFIIWYTHSSFMGIDLSQDGHSLVSYS 906
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 353 TMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYSRF 517
T++LSVLV IEM N++N+LSE+ SLVTMPPW N WL+ +MA+SF LHFVILY F
Sbjct: 951 TLSLSVLVAIEMFNSLNALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPF 1005
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1
Query: 517 LSAVFQVTPLSLDEWVTVMKVSVPVVLLDEVLKFVAR 627
L+ VF + PLSL+EW+ V+ VS+PV+L+DEVLKFV R
Sbjct: 1006 LAQVFGIVPLSLNEWLLVLAVSLPVILIDEVLKFVGR 1042
>At1g07670.1 68414.m00824 calcium-transporting ATPase 4, endoplasmic
reticulum-type (ECA4) identical to SP|Q9XES1
Calcium-transporting ATPase 4, endoplasmic
reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana);
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 775
Score = 105 bits (253), Expect = 2e-23
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYMXX 182
LG+PE +IPVQLLWVNLVTDG PATALGFNPPD DIM KPPR++D+ LI+ W+ FRYM
Sbjct: 524 LGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLITAWILFRYMVI 583
Query: 183 XXXXXXXXXXXXSWWFMYSPYG--PQ*HTGNSLITYN 287
W+ ++ + G+SL++Y+
Sbjct: 584 GLYVGVATVGVFIIWYTHNSFMGIDLSQDGHSLVSYS 620
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 353 TMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALSFTLHFVILYSRF 517
T++LSVLV IEM N++N+LSE+ SLVTMPPW N WL+ +MA+SF LHFVILY F
Sbjct: 665 TLSLSVLVAIEMFNSLNALSEDGSLVTMPPWVNPWLLLAMAVSFGLHFVILYVPF 719
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1
Query: 517 LSAVFQVTPLSLDEWVTVMKVSVPVVLLDEVLKFVAR 627
L+ VF + PLSL+EW+ V+ VS+PV+L+DEVLKFV R
Sbjct: 720 LAQVFGIVPLSLNEWLLVLAVSLPVILIDEVLKFVGR 756
>At4g00900.1 68417.m00122 calcium-transporting ATPase 2, endoplasmic
reticulum-type (ECA2) nearly identical to SP|O23087
Calcium-transporting ATPase 2, endoplasmic
reticulum-type (EC 3.6.3.8) {Arabidopsis thaliana};
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 1054
Score = 99.1 bits (236), Expect = 2e-21
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +3
Query: 3 LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLISGWLFFRYM 176
LG+PE +IPVQLLWVNLVTDG PATALGFNP D+DIM KPPRK+D+ LI W+ RY+
Sbjct: 806 LGIPECMIPVQLLWVNLVTDGPPATALGFNPADIDIMKKPPRKSDDCLIDSWVLIRYL 863
Score = 81.4 bits (192), Expect = 5e-16
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +2
Query: 308 FKGVDCKVFT--DPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMALS 481
F+ C FT PMT++L+VLV IEM N++N+LSE+ SL+TMPPW N WL+ +M +S
Sbjct: 933 FENNPCDYFTLGKVKPMTLSLTVLVAIEMFNSLNALSEDNSLLTMPPWRNPWLLVAMTVS 992
Query: 482 FTLHFVILYSRF 517
F LH VILY F
Sbjct: 993 FALHCVILYVPF 1004
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 517 LSAVFQVTPLSLDEWVTVMKVSVPVVLLDEVLKFVAR 627
L+ VF + PLS EW V+ VS PV+L+DE LKF+ R
Sbjct: 1005 LANVFGIVPLSFREWFVVILVSFPVILIDEALKFIGR 1041
>At5g57110.2 68418.m07131 calcium-transporting ATPase 8, plasma
membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical
to calcium-transporting ATPase 8, plasma membrane-type
SP:Q9LF79 from [Arabidopsis thaliana]
Length = 1074
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVNL+ D L A AL PP +M +PP E LI+
Sbjct: 870 LTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLIT 913
>At5g57110.1 68418.m07130 calcium-transporting ATPase 8, plasma
membrane-type / Ca(2+)-ATPase isoform 8 (ACA8) identical
to calcium-transporting ATPase 8, plasma membrane-type
SP:Q9LF79 from [Arabidopsis thaliana]
Length = 1074
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVNL+ D L A AL PP +M +PP E LI+
Sbjct: 870 LTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLIT 913
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVNL+ D L A AL PP +MD+ P E LI+
Sbjct: 874 LTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAPVGRREPLIT 917
>At1g27770.2 68414.m03396 calcium-transporting ATPase 1, plasma
membrane-type / Ca(2+)-ATPase isoform 1 (ACA1) / plastid
envelope ATPase 1 (PEA1) identical to SP|Q37145
Calcium-transporting ATPase 1, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
ATPase 1) {Arabidopsis thaliana}; identical to cDNA
envelope Ca2+-ATPase (PEA1) chloroplast gene encoding
chloroplast protein GI:509809
Length = 946
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP D+M + P
Sbjct: 769 LTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSP 803
>At1g27770.1 68414.m03395 calcium-transporting ATPase 1, plasma
membrane-type / Ca(2+)-ATPase isoform 1 (ACA1) / plastid
envelope ATPase 1 (PEA1) identical to SP|Q37145
Calcium-transporting ATPase 1, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
ATPase 1) {Arabidopsis thaliana}; identical to cDNA
envelope Ca2+-ATPase (PEA1) chloroplast gene encoding
chloroplast protein GI:509809
Length = 1020
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP D+M + P
Sbjct: 843 LTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSP 877
>At3g22910.1 68416.m02887 calcium-transporting ATPase, plasma
membrane-type, putative / Ca(2+)-ATPase, putative
(ACA13) identical to SP|Q9LIK7 Potential
calcium-transporting ATPase 13, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 13) {Arabidopsis
thaliana}; similar to SP|Q9LF79 Calcium-transporting
ATPase 8, plasma membrane-type (EC 3.6.3.8)
(Ca2+-ATPase, isoform 8) {Arabidopsis thaliana};
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 1017
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVNL+ D L A AL P D+M K P
Sbjct: 832 LTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKP 866
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ ++M + P
Sbjct: 841 LTAVQLLWVNMIMDTLGALALATEPPNNELMKRMP 875
>At3g21180.1 68416.m02677 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA9)
identical to SP|Q9LU41 Potential calcium-transporting
ATPase 9, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 9) {Arabidopsis thaliana}
Length = 1086
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +3
Query: 30 VQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
VQLLWVNL+ D L A AL PP +M + P E LI+
Sbjct: 890 VQLLWVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLIT 930
>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
to SP|O81108 Calcium-transporting ATPase 2, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
{Arabidopsis thaliana}
Length = 1014
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ ++M + P
Sbjct: 840 LTAVQLLWVNMIMDTLGALALATEPPNDELMKRLP 874
>At3g57330.1 68416.m06381 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA11)
identical to SP|Q9M2L4|ACAB_ARATH Potential
calcium-transporting ATPase 11, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 11) {Arabidopsis
thaliana}; strong similarity to calmodulin-stimulated
calcium-ATPase [Brassica oleracea] GI:1805654
Length = 1025
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ +M + P
Sbjct: 831 LTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQP 865
>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
to SP|O22218 Calcium-transporting ATPase 4, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
{Arabidopsis thaliana}
Length = 1030
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPP 125
L VQLLWVN++ D L A AL PP+ +M + P
Sbjct: 834 LTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAP 868
>At3g63380.1 68416.m07135 calcium-transporting ATPase, plasma
membrane-type, putative / Ca(2+)-ATPase, putative
(ACA12) identical to SP|Q9LY77 Potential
calcium-transporting ATPase 12, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 12) {Arabidopsis
thaliana}; similar to SP|Q9LF79 Calcium-transporting
ATPase 8, plasma membrane-type (EC 3.6.3.8)
(Ca2+-ATPase, isoform 8) {Arabidopsis thaliana};
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 1033
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 21 LIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRKADEGLIS 152
L VQLLWVNL+ D L A AL P +++ + P E LI+
Sbjct: 836 LTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEALIT 879
>At2g36680.2 68415.m04500 expressed protein
Length = 168
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 459 SSAPWRSPSLFISSSSTR-GSFGRVPSDAAVARRVG 563
S+ PW SPSL S SS+R + G++PS + G
Sbjct: 22 SATPWYSPSLVTSPSSSRPQTSGQIPSHVSPGEAAG 57
>At2g36680.1 68415.m04499 expressed protein
Length = 218
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 459 SSAPWRSPSLFISSSSTR-GSFGRVPSDAAVARRVG 563
S+ PW SPSL S SS+R + G++PS + G
Sbjct: 22 SATPWYSPSLVTSPSSSRPQTSGQIPSHVSPGEAAG 57
>At3g53120.1 68416.m05854 expressed protein
Length = 217
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 438 RPGQTCGSSAPWRSPSLFISSSSTR-GSFGRVPSDAAVARRVG 563
RP Q S +PW SPSL S SS+R S G++ + + G
Sbjct: 16 RP-QEASSQSPWYSPSLVSSPSSSRPQSSGQISAQVSPGEAAG 57
>At5g42470.1 68418.m05170 expressed protein low similarity to BRE
alpha b isoform [Homo sapiens] GI:16326573
Length = 382
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 332 FTDPHPMTMALSVLVTIEMLNAMNSLSENQSLVTMPPWSNLWLVGSMA 475
F+ P +L + + LN +S+ +L+T PWS W VG MA
Sbjct: 311 FSTQFPKQQPTLMLQSCQHLN-QSSVPVKSNLLTEYPWSPRWEVGRMA 357
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 598 AVPRVLRPSLRLPTRRATAASLGTRPKEPRVEDDEMKSEGERHGADE 458
+V + P+L+ P R++ + + KEP+ E+DE E H D+
Sbjct: 2807 SVVKETEPTLKEPARKSLSDHI---QKEPKTEEDENDDEDHEHKDDK 2850
>At1g56190.1 68414.m06458 phosphoglycerate kinase, putative similar
to SP|P41758 Phosphoglycerate kinase, chloroplast
precursor (EC 2.7.2.3) {Chlamydomonas reinhardtii};
contains Pfam profile PF00162: phosphoglycerate kinase
Length = 478
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 504 STRGSFGRVPSDAAVARRVG 563
S+R SFG +PS + ARR+G
Sbjct: 24 SSRASFGHIPSTSVSARRLG 43
>At1g02780.1 68414.m00233 60S ribosomal protein L19 (RPL19A) similar
to ribosomal protein L19 GI:36127 from [Homo sapiens]
Length = 214
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 56 H*RSARYRPRIQSSRSRHHGQAPSQG*RRSHLRMAVLQIHGYRWLRR 196
H RS + +I + RH G +G R + L VL + R LRR
Sbjct: 58 HSRSRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRR 104
>At5g05740.2 68418.m00632 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains Pfam PF02163:
Sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 527
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 568 RLPTRRATAASLGTRPKEPRVEDDEMKSEGERHGADEP 455
R+ +R T + EP DDE EG+ AD+P
Sbjct: 54 RVFRKRETLVRVTETQTEPEGNDDEDNKEGKESSADDP 91
>At5g05740.1 68418.m00631 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains Pfam PF02163:
Sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 556
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 568 RLPTRRATAASLGTRPKEPRVEDDEMKSEGERHGADEP 455
R+ +R T + EP DDE EG+ AD+P
Sbjct: 54 RVFRKRETLVRVTETQTEPEGNDDEDNKEGKESSADDP 91
>At1g05830.1 68414.m00610 trithorax protein, putative / PHD finger
family protein / SET domain-containing protein similar
to trithorax-like protein 1 [Arabidopsis thaliana]
GI:12659210; contains Pfam domain, PF00628: PHD-finger
and PF00856: SET domain
Length = 1056
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 538 SLGTRPKEPRVEDDEMKSEGERHGADEP 455
S+ PKE ED ++K+E H AD P
Sbjct: 3 SMSCVPKEEEGEDTQIKTELHDHAADNP 30
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,031
Number of Sequences: 28952
Number of extensions: 309533
Number of successful extensions: 916
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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