Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021911X
(369 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 51 2e-07
06_01_0755 + 5648872-5649471,5650092-5650453,5650576-5650619,565... 50 4e-07
09_04_0372 + 17026551-17026778,17027469-17027830,17027925-170279... 49 1e-06
04_04_0045 + 22337089-22337385,22338437-22338715,22338728-223387... 49 1e-06
03_02_0454 + 8626832-8627134,8627255-8627606,8627705-8627748,862... 44 4e-05
09_06_0221 - 21649030-21649290,21649553-21649610,21649943-216502... 34 0.040
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 32 0.16
07_03_0811 - 21688781-21689830 29 0.86
06_02_0225 + 13257655-13260693 29 1.1
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722... 28 2.0
01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411 28 2.0
11_04_0169 + 14397380-14397652,14398317-14398874,14399593-143998... 28 2.6
06_03_0404 - 20460555-20462135 28 2.6
09_02_0237 + 6141048-6141962 27 3.5
05_06_0056 + 25246631-25246913,25247047-25247141,25247593-252476... 27 3.5
05_02_0064 + 6267129-6267803 27 3.5
01_05_0323 - 20934429-20934447,20934658-20934774,20934815-209349... 27 3.5
07_03_1507 - 27228032-27228742 27 4.6
03_01_0343 - 2699518-2700114 27 4.6
07_03_0526 - 19046900-19047083,19049061-19049464 27 6.1
04_04_0952 + 29627286-29627852 27 6.1
01_01_0821 + 6399890-6400397,6400474-6401066 27 6.1
12_01_0753 + 6810239-6810661,6812495-6812584,6812724-6812894,681... 26 8.1
10_08_0667 + 19733236-19733610,19734004-19734122,19734713-19735151 26 8.1
09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659 26 8.1
04_04_1634 + 34937087-34937198,34937652-34937790,34938263-349383... 26 8.1
03_05_0490 + 24866418-24867008 26 8.1
02_04_0161 + 20436786-20437151 26 8.1
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 51.2 bits (117), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 251 SACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSVR 367
++CGLT AV PLDLVKC +Q D KYK++ +GF V ++
Sbjct: 78 ASCGLTHMAVTPLDLVKCNMQIDPAKYKSITSGFGVLLK 116
Score = 33.5 bits (73), Expect = 0.053
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 96 FRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGV 251
F P+SPA + AP A+ GG S P E E SP ++A C GG+
Sbjct: 32 FPSPVSPA----SPAPGAVG--GGAPISIQAPREKIEMYSPAFYAACTAGGI 77
>06_01_0755 +
5648872-5649471,5650092-5650453,5650576-5650619,
5651324-5651538,5651643-5651767,5651862-5651931
Length = 471
Score = 50.4 bits (115), Expect = 4e-07
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 251 SACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKV 358
++CGLT AV PLDLVKC +Q D KYK++ +GF +
Sbjct: 180 ASCGLTHMAVTPLDLVKCNMQIDPAKYKSITSGFGI 215
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 162 GGMAASAAVPTESCEFGSPKYFALCGVGGV 251
GG P E E SP ++A C GG+
Sbjct: 150 GGAPIEIQAPREKIEMYSPAFYAACTAGGI 179
>09_04_0372 +
17026551-17026778,17027469-17027830,17027925-17027968,
17028079-17028293,17028405-17028529,17028617-17028692
Length = 349
Score = 48.8 bits (111), Expect = 1e-06
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 251 SACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSVR 367
+ACGLT AV PLD++KC +Q D KYK+ + F V +R
Sbjct: 56 AACGLTHAAVTPLDVIKCNIQIDPTKYKSTTSAFGVVMR 94
>04_04_0045 +
22337089-22337385,22338437-22338715,22338728-22338798,
22338883-22338926,22340670-22340884,22340958-22341082,
22341142-22341220,22341278-22341367
Length = 399
Score = 48.8 bits (111), Expect = 1e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 251 SACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSVR 367
++CGLT V PLDLVKC +Q D KYK++ +GF V ++
Sbjct: 79 ASCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLK 117
>03_02_0454 +
8626832-8627134,8627255-8627606,8627705-8627748,
8629014-8629035,8629136-8629350,8629468-8629592,
8629681-8629756
Length = 378
Score = 44.0 bits (99), Expect = 4e-05
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 260 GLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKV 358
GLT AV PLDLVKC +Q D KY+++ +GF V
Sbjct: 84 GLTHLAVTPLDLVKCNMQVDPGKYRDISSGFGV 116
>09_06_0221 -
21649030-21649290,21649553-21649610,21649943-21650292,
21650605-21650799
Length = 287
Score = 33.9 bits (74), Expect = 0.040
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSVR 367
A G T A+ PLD++K +Q + KY ++ +G + V+
Sbjct: 46 AAGATHLAITPLDVLKVNMQVNPMKYNSIFSGLNILVK 83
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 31.9 bits (69), Expect = 0.16
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -3
Query: 280 HGRGGQTACRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGP 101
H G+ R R G P ++ + GTAA PPV +IAT + W A G
Sbjct: 372 HEERGRPEQRGIDLRNRLSQRGSPKAETTAGTAA---APPVAAIATSPAIGW-VAPQPGA 427
Query: 100 RNGEFRAASS 71
G AA +
Sbjct: 428 HPGRLLAAGA 437
>07_03_0811 - 21688781-21689830
Length = 349
Score = 29.5 bits (63), Expect = 0.86
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = -3
Query: 289 EGHHGRGGQTACRTPPTPQRAKYLGDPNSQD--SVGTAADAAMPPV--CSIATGATVDWH 122
EG G GG P+P GD + +D G A A++P S A T+ H
Sbjct: 11 EGSDGEGGSATDVAAPSPAPMDIDGDDDGRDRGGEGDGAAASVPAADGSSAALSLTLGLH 70
Query: 121 WAGDSG 104
GD G
Sbjct: 71 VHGDGG 76
>06_02_0225 + 13257655-13260693
Length = 1012
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 247 PPTPQRAKYLGDPNSQDSVGTA--ADAAMPPVCSIATGATVDWHWAGDSGPR 98
PPTP G P + S G A D +PP S ++ V+ GD G +
Sbjct: 13 PPTPDNQPSGGAPPAAPSAGGARPGDLPLPPYGSSSSSRLVNRRGGGDDGAK 64
>10_08_0397 +
17571492-17571664,17571875-17572034,17572140-17572222,
17572333-17572468,17572515-17572610,17573105-17573218,
17573322-17573405,17573493-17573648,17573744-17573818,
17574318-17574424,17574508-17574688,17574832-17575020,
17575397-17575477,17575621-17575755,17576007-17576329,
17576503-17576608,17576734-17576883,17577034-17577180
Length = 831
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 271 GGQTACRTP-PTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDW 125
G T+C + TPQ L D ++ + T A+ + S ATG VDW
Sbjct: 115 GNDTSCESNVTTPQNP--LRDASNPSGLLTIAEETLTEFLSKATGTAVDW 162
>01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411
Length = 465
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 268 GQTACRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDW 125
G+TA PP P R ++ +S+DS A AA+ +IA A W
Sbjct: 26 GRTAA-APPPPDRKRWSFAKSSRDSTEGEAAAAVGGNAAIAKAAEAAW 72
>11_04_0169 +
14397380-14397652,14398317-14398874,14399593-14399823,
14399924-14400064,14401051-14401248,14401319-14401591,
14401959-14401976
Length = 563
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 63 SSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGG--MAASAAVPTES 200
SS +R PFR + S APV +E GG A AA P S
Sbjct: 39 SSRCSFSRGGPFRVHCAVTATTSAAAPVVVEAPGGGMRLAYAAAPDSS 86
>06_03_0404 - 20460555-20462135
Length = 526
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 278 RPWGSDRMQNTTNSAKSEIFRRSKFTGLRGYRSRRRHATGLLDS 147
R G D + S + E+F GLR R RR AT +DS
Sbjct: 106 RSGGHDYEGLSYRSVRQEVFAVVDLAGLRSVRVNRRAATAWVDS 149
>09_02_0237 + 6141048-6141962
Length = 304
Score = 27.5 bits (58), Expect = 3.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 164 WHGGVCCGTHGVL 202
WHGGV CG +G L
Sbjct: 252 WHGGVSCGEYGEL 264
>05_06_0056 +
25246631-25246913,25247047-25247141,25247593-25247629,
25248158-25248219,25248305-25248418,25249248-25249352,
25249441-25249539,25250203-25250359,25250473-25250579
Length = 352
Score = 27.5 bits (58), Expect = 3.5
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = +3
Query: 129 STVAP-VAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVLHAV*PPRPW 281
S AP + + G AA+AA P E+ G+ A G PP+ W
Sbjct: 20 SAAAPHFSTTASSGAAAAAAAPVEAAAAGASDASAAAAAGAGEQPAPPPKRW 71
>05_02_0064 + 6267129-6267803
Length = 224
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 259 ACRTPPTPQRAKYLGDPNSQDSVGTAADAAM 167
A R PP P RAK GD + D AA A +
Sbjct: 77 ASRPPPPPPRAKDGGDDDDDDQQPAAAAAGV 107
>01_05_0323 -
20934429-20934447,20934658-20934774,20934815-20934964,
20935578-20935828,20936403-20936449,20936852-20936976,
20937039-20937154,20937194-20937284,20937772-20937893,
20938667-20938894,20938990-20939221,20941598-20941797
Length = 565
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 3 GAVCSWLVNSIKLN*NIIMFSSLLDAARNSPFRGPLSPA 119
G +C WLV+ + L+ ++ + + + P P+SPA
Sbjct: 226 GCMCKWLVSYLLLSVDVWLMMRSEERRQAEPHPNPISPA 264
>07_03_1507 - 27228032-27228742
Length = 236
Score = 27.1 bits (57), Expect = 4.6
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 21 LVNSIKLN*NIIMFSSLLDAARNSPFRGPLS--PAQCQSTVAPVAIEQTGGMAASAAVPT 194
L S +L I F++ SPFR P + P+ S AP +ASAAVP
Sbjct: 67 LRTSFRLGVISIGFAAFPSTPSASPFRPPTAGAPSSSSSRTAPPP------SSASAAVPV 120
Query: 195 ESCEFGSPK 221
+ + G PK
Sbjct: 121 VAVDRGEPK 129
>03_01_0343 - 2699518-2700114
Length = 198
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 301 LHQVEGHHGRGGQTACRTPP-TPQR 230
LH G HGRGG + RTP +P+R
Sbjct: 158 LHLRLGRHGRGGDGSPRTPEGSPER 182
>07_03_0526 - 19046900-19047083,19049061-19049464
Length = 195
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 78 AARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAV 188
AA SP P S++APVA GG ++SAAV
Sbjct: 15 AALPSPMEEDKKPRLVASSLAPVAGGGGGGSSSSAAV 51
>04_04_0952 + 29627286-29627852
Length = 188
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 271 GGQTACRTPPTPQRAKYLGD 212
G Q A +PPTP A+Y+ D
Sbjct: 127 GAQHAAASPPTPDVARYVAD 146
>01_01_0821 + 6399890-6400397,6400474-6401066
Length = 366
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 243 GGVLHAV*PPRPWCPSTW 296
GG+LHA PP P P +W
Sbjct: 130 GGLLHAAPPPCPIPPDSW 147
>12_01_0753 +
6810239-6810661,6812495-6812584,6812724-6812894,
6813015-6813109,6813538-6813658,6813884-6814015
Length = 343
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -3
Query: 295 QVEGHHGRGGQTACRTPPTPQRAKYLGDPNSQDSVGTAADAAM 167
+V HHG GG A P P L N +V T A +AM
Sbjct: 80 RVRVHHGVGGAGAAAVEPPPPEVALLA-RNFSVAVDTVARSAM 121
>10_08_0667 + 19733236-19733610,19734004-19734122,19734713-19735151
Length = 310
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 110 IARPVPVDGRARGYRADRWHGGVC 181
+ARPVP DG ++ + ++ G VC
Sbjct: 114 LARPVPFDGGSKEFWLEKSKGRVC 137
>09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659
Length = 522
Score = 26.2 bits (55), Expect = 8.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 201 CEFGSPKYFALCGVGGVLHAV*PPRP 278
CE+ +P+ F +C HA+ PP P
Sbjct: 103 CEYFNPRLFLVCDPVSRRHALFPPPP 128
>04_04_1634 +
34937087-34937198,34937652-34937790,34938263-34938334,
34938414-34938546,34938591-34938730,34939478-34939585,
34939650-34939720,34940297-34940545,34940618-34940823,
34940894-34941026,34941099-34941101,34941136-34941293,
34941420-34941683,34941869-34942114
Length = 677
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 181 LRYPRSPVNLDRLNISLFAELVVFCMRSDPHGR 279
L Y ++L RLN A+ + +C SDP R
Sbjct: 405 LFYQNKVIDLARLNHENIAKFLGYCRESDPFSR 437
>03_05_0490 + 24866418-24867008
Length = 196
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 247 PPTPQRAKYLGDPNS-QDSVGTAADAAMP 164
PP PQ A+ DP + ++ T ADAA P
Sbjct: 12 PPPPQPAEPAADPPAKEEPQNTTADAAAP 40
>02_04_0161 + 20436786-20437151
Length = 121
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 128 VDGRARGYRADRWHGGVC--CGTHG 196
+DGRA G+ A RW G C HG
Sbjct: 87 LDGRAAGHGAARWGSGASGPCELHG 111
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,934,061
Number of Sequences: 37544
Number of extensions: 241663
Number of successful extensions: 1019
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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