Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021911X
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical p... 54 3e-08
Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical p... 54 3e-08
Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical pr... 54 3e-08
X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carri... 54 3e-08
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 53 6e-08
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 53 6e-08
Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical pr... 50 4e-07
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 30 0.45
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 27 3.2
U58750-4|AAB00644.1| 309|Caenorhabditis elegans Hypothetical pr... 27 4.2
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 4.2
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 4.2
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 27 5.5
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 26 7.3
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 26 7.3
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 26 9.7
AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical ... 26 9.7
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 26 9.7
>Z73103-14|CAL22701.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 54.0 bits (124), Expect = 3e-08
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CG+T TA+VPLDLVKCR+Q + EKY + GF+ ++
Sbjct: 100 SCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTI 136
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 135 VAPVAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
VA VA+ +A+S EFGS KY+A C +GGVL
Sbjct: 62 VARVAVGVVTTVASS--YEAGQVEFGSGKYYAYCALGGVL 99
>Z73103-13|CAA97430.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 54.0 bits (124), Expect = 3e-08
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CG+T TA+VPLDLVKCR+Q + EKY + GF+ ++
Sbjct: 53 SCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTI 89
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 141 PVAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
P ++ G ASA EFGS KY+A C +GGVL
Sbjct: 15 PFSLPVRSGNCASAVSAPGQVEFGSGKYYAYCALGGVL 52
>Z68341-7|CAL22703.1| 387|Caenorhabditis elegans Hypothetical
protein F01G4.6b protein.
Length = 387
Score = 54.0 bits (124), Expect = 3e-08
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CG+T TA+VPLDLVKCR+Q + EKY + GF+ ++
Sbjct: 100 SCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTI 136
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 135 VAPVAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
VA VA+ +A+S EFGS KY+A C +GGVL
Sbjct: 62 VARVAVGVVTTVASS--YEAGQVEFGSGKYYAYCALGGVL 99
>Z68341-6|CAA92769.1| 340|Caenorhabditis elegans Hypothetical
protein F01G4.6a protein.
Length = 340
Score = 54.0 bits (124), Expect = 3e-08
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CG+T TA+VPLDLVKCR+Q + EKY + GF+ ++
Sbjct: 53 SCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTI 89
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 141 PVAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
P ++ G ASA EFGS KY+A C +GGVL
Sbjct: 15 PFSLPVRSGNCASAVSAPGQVEFGSGKYYAYCALGGVL 52
>X76113-1|CAA53719.1| 340|Caenorhabditis elegans phosphate carrier
protein protein.
Length = 340
Score = 54.0 bits (124), Expect = 3e-08
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CG+T TA+VPLDLVKCR+Q + EKY + GF+ ++
Sbjct: 53 SCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTI 89
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 141 PVAIEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
P ++ G ASA EFGS KY+A C +GGVL
Sbjct: 15 PFSLPVRSGNCASAVSAPGQVEFGSGKYYAYCALGGVL 52
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 53.2 bits (122), Expect = 6e-08
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CGLT A+ PLD+VKCR+Q + EKY ++V GFKV++
Sbjct: 59 SCGLTHFAITPLDIVKCRIQVNKEKYGSMVQGFKVTI 95
Score = 31.1 bits (67), Expect = 0.26
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 FRGPLSPAQCQSTVAPVA--IEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
F AQ V P A + +T +++A EFGS +++A+C +GG L
Sbjct: 4 FHDVFDAAQKNGLVIPSASSVVRTAKCSSAATSVAAPIEFGSSQFYAMCALGGSL 58
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 53.2 bits (122), Expect = 6e-08
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 254 ACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
+CGLT A+ PLD+VKCR+Q + EKY ++V GFKV++
Sbjct: 59 SCGLTHFAITPLDIVKCRIQVNKEKYGSMVQGFKVTI 95
Score = 31.1 bits (67), Expect = 0.26
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 FRGPLSPAQCQSTVAPVA--IEQTGGMAASAAVPTESCEFGSPKYFALCGVGGVL 254
F AQ V P A + +T +++A EFGS +++A+C +GG L
Sbjct: 4 FHDVFDAAQKNGIVIPSAPSVVRTAKCSSAATSVAAPIEFGSSQFYAMCALGGSL 58
>Z74028-1|CAA98424.1| 334|Caenorhabditis elegans Hypothetical
protein C14C10.1 protein.
Length = 334
Score = 50.4 bits (115), Expect = 4e-07
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 257 CGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
CG T + PLD+VKCR+Q D KY VV GFKV+V
Sbjct: 46 CGFTHLVITPLDIVKCRMQVDPLKYTGVVQGFKVAV 81
Score = 30.7 bits (66), Expect = 0.34
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 207 FGSPKYFALCGVGG 248
FGSPK++ LCG+GG
Sbjct: 29 FGSPKFYVLCGMGG 42
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 30.3 bits (65), Expect = 0.45
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 301 LHQVEGHHGRGGQTACRTPPTPQRAKYLGDPNSQDSVGTAADAAMP 164
++Q+ G G G R PP P+ L NS+ G DA P
Sbjct: 217 INQINGPAGPAGHKGVRGPPGPRGEAGLDGGNSEGPQGPQGDAGRP 262
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 224 FRSLRSWWCSACGLTPTAVVPLDLVKCRLQ 313
+R L ACG T AV P+DLVK R+Q
Sbjct: 371 YRFLLGSVAGACGAT--AVYPIDLVKTRMQ 398
>U58750-4|AAB00644.1| 309|Caenorhabditis elegans Hypothetical
protein F55G1.5 protein.
Length = 309
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 275 AVVPLDLVKCRLQXDAEKYKNVVNGF 352
+V PLD+VK R+Q Y + + F
Sbjct: 233 SVTPLDVVKTRIQTGGSNYNGIFHAF 258
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 272 TAVVPLDLVKCRLQXD--AEKYKNVVNGFKVS 361
+ V P+DLVK RLQ KY + + FK S
Sbjct: 36 SCVFPMDLVKTRLQNQKGTSKYTGIADCFKKS 67
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 239 SWWCSACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
SW+C CG +P + + L L ++ K+ N FK +V
Sbjct: 1955 SWFCRQCGHSPKSEIDLFLHYIQVHLKPAYDKHQSNSFKSNV 1996
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 239 SWWCSACGLTPTAVVPLDLVKCRLQXDAEKYKNVVNGFKVSV 364
SW+C CG +P + + L L ++ K+ N FK +V
Sbjct: 1955 SWFCRQCGHSPKSEIDLFLHYIQVHLKPAYDKHQSNSFKSNV 1996
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 247 PPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGA 137
PP P ++ P SVG+AA + PP+ S A
Sbjct: 123 PPPPAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASA 159
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 298 HQVEGHHGRGGQTACRTPPTPQRAKYLGDP 209
H + ++GRG T C + PT QR K+ G P
Sbjct: 796 HTLINNYGRGVSTECES-PTQQR-KFFGGP 823
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 248 CSACGLTPTAVVPLDLVKCRLQXDAEKY 331
C+A + T PLD+ K RLQ K+
Sbjct: 31 CTAALVAETVTYPLDITKTRLQIARNKF 58
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 293 GRGAPRPWGSDRMQNTTNSAKSEIFRRSKFTGLRGYRSRRRH 168
GRGAPR KS+ S RG R RRH
Sbjct: 195 GRGAPRQTRDQDGDEKDEKEKSDTIENSGDGETRGKRRTRRH 236
>AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical
protein Y80D3A.4 protein.
Length = 424
Score = 25.8 bits (54), Expect = 9.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 287 GAPRPWGSDRMQNTTNSAK 231
G+P PWGSD +Q +
Sbjct: 166 GSPTPWGSDSLQKLARGVR 184
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 293 GRGAPRPWGSDRMQNTTNSAKSEIFRRSKFTGLRGYRSRRRH 168
GRGAPR KS+ S RG R RRH
Sbjct: 195 GRGAPRQTRDQDGDEKDEKEKSDTIENSGDGETRGKRRTRRH 236
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,487,248
Number of Sequences: 27780
Number of extensions: 171491
Number of successful extensions: 605
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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