Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021910
         (649 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23K98 Cluster: Cation channel family protein; n=1; Tet...    35   2.0  
UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2; ...    33   7.9  

>UniRef50_Q23K98 Cluster: Cation channel family protein; n=1;
           Tetrahymena thermophila SB210|Rep: Cation channel family
           protein - Tetrahymena thermophila SB210
          Length = 2872

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = +3

Query: 369 KKKG*TRLNIVFFGFVLQFNIL*RKII-IELRTEFNGIHCVSFKGSVLFPNGFQNSKTLS 545
           +K    +LN+  F  V + N++ + I   E     NG+ CV  KGS    N FQ  K   
Sbjct: 493 EKNSENKLNVTDFKDVTE-NMIYKPIDDSEFEVYRNGLTCVD-KGSTE-ENAFQVIKLTE 549

Query: 546 KEKHNLLFVNYFRRVWYLLIEKL 614
           +EK N+L+VN    + +  ++KL
Sbjct: 550 EEKQNILYVNSSLNILHKFLQKL 572


>UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2528

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2

Query: 405 KKQCLTWFNLFFFKRFYDLVTKTFKSCLILIYNLIL 298
           KK+ +  +  FFF  FY L+    KSC+++ Y+++L
Sbjct: 449 KKEDIEEYFFFFFFLFYFLLLNNNKSCIVIYYDILL 484


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,541,834
Number of Sequences: 1657284
Number of extensions: 10931525
Number of successful extensions: 22296
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22284
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)