Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021910
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.4  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   5.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 494 QRECFISKWISKLENSFKGKTQ 559
           Q  C I    S++EN+ +G+TQ
Sbjct: 372 QNSCNIYNASSRMENNLRGETQ 393


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 538 VFEF*NPFGNKTLPLKLTQWIPLNSVLNSI 449
           VFE   P     L L++ +W PL S L+ I
Sbjct: 109 VFERTEPLSPHLLNLEVERWRPLRSRLSPI 138


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +3

Query: 438 RKIIIELRTEFNGIHCVSFKGSVLFPNGFQNSKTLSKEKHNLLFVNYFRRVWYL 599
           RKI +    E N I  V     + +P+  + S ++  E HN+   +Y + V+YL
Sbjct: 249 RKIYLFSGHESN-IASVLHALQLYYPHVPEYSSSIIMELHNIEGTHYVKIVYYL 301


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +3

Query: 438 RKIIIELRTEFNGIHCVSFKGSVLFPNGFQNSKTLSKEKHNLLFVNYFRRVWYL 599
           RKI +    E N I  V     + +P+  + S ++  E HN+   +Y + V+YL
Sbjct: 264 RKIYLFSGHESN-IASVLHALQLYYPHVPEYSSSIIMELHNIEGTHYVKIVYYL 316


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 475 PLNSVLNSIIIFLHRILNCSTKPKK 401
           P N +L S+      I N  T+P K
Sbjct: 7   PCNKILTSLTRLRRHIQNVHTRPSK 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,045
Number of Sequences: 438
Number of extensions: 3463
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)