Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021909
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13427| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_22524| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 33 0.17
SB_1097| Best HMM Match : Rho_N (HMM E-Value=0.0007) 32 0.40
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 31 0.92
SB_15824| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_46327| Best HMM Match : Rho_N (HMM E-Value=4.2e-05) 31 0.92
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_20177| Best HMM Match : hATC (HMM E-Value=1e-04) 30 1.2
SB_56938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_50462| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_46848| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_41355| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_33840| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_31240| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_23283| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_22637| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_20968| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_17153| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_15445| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_9405| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00011) 30 1.6
SB_8141| Best HMM Match : Rho_N (HMM E-Value=0.011) 30 1.6
SB_7531| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_6582| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_2135| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_6| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_58032| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_43301| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_42931| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_42631| Best HMM Match : Phasin (HMM E-Value=6.4) 30 1.6
SB_33641| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_31660| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_31577| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_24806| Best HMM Match : Rho_N (HMM E-Value=0.0014) 30 1.6
SB_23247| Best HMM Match : Rho_N (HMM E-Value=0.0066) 30 1.6
SB_12558| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015) 30 1.6
SB_7105| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_7083| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_6805| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_3816| Best HMM Match : Rho_N (HMM E-Value=0.0007) 30 1.6
SB_1634| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_7580| Best HMM Match : Topoisom_bac (HMM E-Value=0) 29 2.1
SB_56187| Best HMM Match : Rho_N (HMM E-Value=0.0007) 29 2.1
SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_52212| Best HMM Match : Rho_N (HMM E-Value=5.2e-05) 29 2.8
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 29 2.8
SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_18379| Best HMM Match : Rho_N (HMM E-Value=5.2e-05) 29 2.8
SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0) 29 2.8
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 2.8
SB_19314| Best HMM Match : Rho_N (HMM E-Value=5.2e-05) 29 2.8
SB_44923| Best HMM Match : Fibrillarin (HMM E-Value=0) 28 4.9
SB_31523| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 4.9
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 28 4.9
SB_1938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_57649| Best HMM Match : RPE65 (HMM E-Value=9) 28 6.5
SB_46154| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-27) 28 6.5
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 28 6.5
SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8) 28 6.5
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 27 8.6
SB_51564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 27 8.6
>SB_13427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 494 PGLLSIQPCFYQDINVDIPLEFQRIVRHLY 583
P +PCFY DI VDIP+E+Q++ R L+
Sbjct: 11 PEWFKFKPCFYHDIQVDIPIEYQKLCRFLF 40
>SB_22524| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 494 PGLLSIQPCFYQDINVDIPLEFQRIVRHLY 583
P +PCFY DI VDIP+E+Q++ R L+
Sbjct: 143 PKWFKCKPCFYHDIQVDIPIEYQKLCRFLF 172
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 121 DNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQ 243
D + DP +NPFADPSV + T+ A+RGL D+NPF Q
Sbjct: 3 DGGYGDP--ENPFADPSVTDM---TSGASRGLGDFNPFAEQ 38
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 241 QQNVNNPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLH 366
QQ+ +NP + QHN Q +L H +P S+ S+ Q LH
Sbjct: 356 QQDQHNPLFNQFLQHNNQQQQLFHPEPDVSSPVMTSQAQHLH 397
>SB_1097| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 211
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRPS + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPSRITPSNTSES 74
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 30.7 bits (66), Expect = 0.92
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASENQQL*NLVEALKPAVRVL 334
GA + PP PR VPLP PRP + P SE + VE LK ++ L
Sbjct: 548 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSE-KAADKRVERLKERIKRL 601
>SB_15824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P ASE+
Sbjct: 87 GALTNTSPPPPPRRVPLPKLLKGLPRPPRIIPSNASES 124
>SB_46327| Best HMM Match : Rho_N (HMM E-Value=4.2e-05)
Length = 856
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P ASE+
Sbjct: 87 GALTNTSPPPPPRRVPLPKLLKGLPRPPRIIPSNASES 124
>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAAS 391
PP+P VP P AP RP P + S
Sbjct: 204 PPSPEPVPTPKAPASRPGTKRPASPS 229
>SB_20177| Best HMM Match : hATC (HMM E-Value=1e-04)
Length = 618
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAAS 391
PP+P VP P AP RP P + S
Sbjct: 28 PPSPEPVPTPKAPASRPGTKRPASPS 53
>SB_56938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 653
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_50462| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 355
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_46848| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 173
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_41355| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 992
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1018
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_33840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_31240| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_23283| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1128
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_22637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_20968| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 303
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_17153| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 393
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 112 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 149
>SB_15445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_9405| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.00011)
Length = 1092
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKRLPRPPRITPSNTSES 74
>SB_8141| Best HMM Match : Rho_N (HMM E-Value=0.011)
Length = 299
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 31 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 68
>SB_7531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_6582| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 198
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_2135| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 305
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_6| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 486
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_58032| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 243
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 137 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 174
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAASENQQ 379
PP P GVP P P P P + P + + Q
Sbjct: 306 PPLPAGVPAPPPPPPPPMLGGPKIKTSDSQ 335
>SB_43301| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 393
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_42931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 8 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 45
>SB_42631| Best HMM Match : Phasin (HMM E-Value=6.4)
Length = 213
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 8 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 45
>SB_33641| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 173
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_31660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1185
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_31577| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 871
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_31526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1248
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_24806| Best HMM Match : Rho_N (HMM E-Value=0.0014)
Length = 173
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALASTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_23247| Best HMM Match : Rho_N (HMM E-Value=0.0066)
Length = 835
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 31 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 68
>SB_12558| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 211
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015)
Length = 916
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_7105| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 173
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_7083| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 211
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_6805| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 211
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_3816| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 632
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_1634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSES 74
>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 136 DPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVNN--PRLSNSNQHNRQSCRLC 309
DP +N DP + R N + N D + +NN PR S ++ R S +
Sbjct: 120 DPVNNNDTRDPVNNRDTRDPVNNRDNPDPVNNRDTRDTINNRHPRPSQQQRYPRPSQQQR 179
Query: 310 HHQPAASTQDPHSRLQRLH 366
+ +P+ + P Q+ H
Sbjct: 180 YPRPSQQQRHPRPSQQQRH 198
>SB_7580| Best HMM Match : Topoisom_bac (HMM E-Value=0)
Length = 856
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/71 (36%), Positives = 34/71 (47%)
Frame = +1
Query: 253 NNPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQISQLLIFRGGKRS*NGRPRSW 432
N+P +N QH + C C P P RLQ H S+ ++RGG+ GR
Sbjct: 784 NSPLPNNLTQH--RGCPFC--DPILV---PLVRLQ--HAASRHPMYRGGR----GRGGRG 830
Query: 433 RGGKRNSARGR 465
RGG+R RGR
Sbjct: 831 RGGRRRRGRGR 841
>SB_56187| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 198
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRVPLPKLLKGLPRPPRITPSNTSES 74
>SB_55600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASE 388
GA + PP PR VPLP PRP + P SE
Sbjct: 169 GALTSTSPPPPPRRVPLPKLVKGLPRPPRITPSNTSE 205
>SB_52212| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
Length = 384
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 39 GALTSTSPPPPPRRVPLPKLLKGLPRPPDIIPSNTSES 76
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 960 GALTSTSPPPPPRRVPLPKLLKGLPRPPDIIPSNTSES 997
>SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Frame = +1
Query: 121 DNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVN---NPRLSNSNQH-N 288
+NP S+P +NP ++P NN + + NP ++ N NP+ +N + N
Sbjct: 200 NNPSSNPKSNNPSSNP-------KPNNPSSNPKPNNPSSNPKSNNPSSNPKPNNPGTYLN 252
Query: 289 RQSC---RLCHHQPAASTQD 339
R+SC + HH P + ++
Sbjct: 253 RKSCSESQQIHHLPQQAKRE 272
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 121 DNPFSDPTIDNPFADPSVQQVARS--TNNATRGLEDYNPFDGQQNVNNPRLSNSNQHNRQ 294
+NP S+P +NP ++P + + +NN + + NP NNP SN +N
Sbjct: 182 NNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSSNPKPNNP-SSNPKPNNPS-SNPKSNNPS 239
Query: 295 SCRLCHHQPAASTQDPHSRLQRLHQISQ 378
S ++ + S Q++H + Q
Sbjct: 240 SNPKPNNPGTYLNRKSCSESQQIHHLPQ 267
>SB_18379| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
Length = 398
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 207 GALTSTSPPPPPRRVPLPKLLKGLPRPPDIIPSNTSES 244
>SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 718
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 404 GARTEGRGVGAAGSGTPRGVGGSPQ*LAAPPGLLSIQPCFYQDINVDIPLEFQRI 568
G+ + G G G P GG P + APPG+ P + I + + EF ++
Sbjct: 294 GSPSIGSGPPGMEEGPPGTGGGPPGSVGAPPGMGDGPPGTGELIGIGVAFEFHKL 348
>SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1289
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 471 DPPTPRGVPLPAAPTPRPSVLAPLAASENQQL*NLVEALKP 349
D TP P P PTP P+V +N+ L ++ EAL+P
Sbjct: 616 DDVTPTPSPTPT-PTPTPAVTPNKEYKQNRGLASISEALEP 655
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -3
Query: 468 PPTPRG---VPLPAAPTPRPSVLAPLAASEN 385
PP P G VP P P+P PS L+PL+++++
Sbjct: 807 PPLPEGLRPVPSPRTPSPMPS-LSPLSSTDS 836
>SB_19314| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
Length = 708
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR VPLP PRP + P SE+
Sbjct: 87 GALTSTSPPPPPRRVPLPKLLKGLPRPPDIIPSNTSES 124
>SB_44923| Best HMM Match : Fibrillarin (HMM E-Value=0)
Length = 304
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 391 RGGKRS*NGRPRSWRGGKRNSARGRRVATITGRPSRASVHTAVLLPG 531
RGG R G +S RGG R RG R ++ T L+PG
Sbjct: 56 RGGGRGGGGGFKSPRGGGRGGGRGGGRGVFIARGKEDALVTKNLVPG 102
>SB_31523| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1104
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -3
Query: 492 GAASYCGDPPTPRGVPLP--AAPTPRPSVLAPLAASEN 385
GA + PP PR PLP PRP + P SE+
Sbjct: 37 GALTSTSPPPPPRRAPLPKLVKGLPRPPRITPSNTSES 74
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/63 (22%), Positives = 27/63 (42%)
Frame = +1
Query: 100 LRMSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLSNSN 279
L + +D +++ + AD + + TNN + N N+NN +N+N
Sbjct: 43 LHALEVDDIAWTEEKVGKRSADAKLTNILIITNNKNNNNNNNNHHHHHNNINNNNNNNNN 102
Query: 280 QHN 288
+N
Sbjct: 103 NNN 105
>SB_1938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 232 FDGQQNVNNPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQISQ 378
FD QQ+ N R QHNR+ + H+Q Q H+R Q+ Q +Q
Sbjct: 237 FDEQQH--NKRQQQRQQHNRRQQQQLHNQQQQRQQ--HNRRQQQQQHNQ 281
>SB_57649| Best HMM Match : RPE65 (HMM E-Value=9)
Length = 309
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 334 QDPHSRLQRLHQISQLLIFRGGKRS*NGRPRSWRGGKRNSARGRR 468
+ PH+R R+ ++Q RGG+R + RGG+ R+
Sbjct: 236 EHPHTRYARISPLTQSRRTRGGRREDEDVGKKTRGGRHEKEDTRK 280
>SB_46154| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-27)
Length = 799
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 82 NSAENLLRMSKFEDNPFSDPTIDNPFADPSVQQVARST 195
N EN +M N + P PF P+VQ VAR+T
Sbjct: 716 NMMENNYQMGVEMQNSWDMPDSVYPFTPPNVQPVARAT 753
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 441 PAAPTPRPSVLAPLAASENQQL*NLVEALKP 349
P T RPS +PL A E+ ++ +EAL P
Sbjct: 288 PVVSTARPSTFSPLPAQESPEM-ACIEALSP 317
>SB_28576| Best HMM Match : Equine_IAV_S2 (HMM E-Value=2.8)
Length = 213
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 196 NNATRGLEDYNPFDGQQNVNNPRLSNSNQHNRQS 297
NN +D N D N+NN + N+N +N ++
Sbjct: 114 NNINNNDDDNNKSDNNNNINNNIIINNNNNNDEN 147
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -3
Query: 477 CGDPPTPRGVPLPA-APTPRP 418
CGDPP P P P PTP P
Sbjct: 92 CGDPPPPATPPPPTMPPTPPP 112
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAAS 391
PPTP P P P P + AP++ +
Sbjct: 468 PPTPISAPYPVEGYPPPLIYAPMSGA 493
>SB_51564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 76 LNNSAENLLRMSKFEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVN 255
+ + N+ S + NPF PS + + + +D+ PFDG++N+N
Sbjct: 221 IGHELRNIYERSPLDWNPFDHTRRRRYHRAPSYNN--NNYDYVSDESDDWVPFDGRRNIN 278
Query: 256 N 258
N
Sbjct: 279 N 279
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 401 RGARTEGRGVGAAGSGTPRGVGG 469
RG GRG G G G RG GG
Sbjct: 165 RGGNGGGRGGGEGGGGRGRGTGG 187
>SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = -3
Query: 477 CGDP----PTPRGVPLPAAPTPRPSVLAPLAASEN 385
CG P P G+P +A + P +L PL+AS N
Sbjct: 158 CGGPNYFLSLPTGMPTVSAHSSYPGLLTPLSASSN 192
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 309 SPPASSQYTRPAQQASAPPP 368
+PP YT P A APPP
Sbjct: 710 TPPPQQAYTSPPSSAPAPPP 729
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,157,043
Number of Sequences: 59808
Number of extensions: 383141
Number of successful extensions: 2447
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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