Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021909
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 44 6e-05
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 44 6e-05
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.80
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.80
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.80
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 29 2.4
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 2.4
Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 29 3.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 4.3
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 4.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 4.3
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 28 4.3
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 5.7
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 28 5.7
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 5.7
AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 28 5.7
Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical pr... 27 7.5
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 7.5
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 27 7.5
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 27 7.5
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 27 7.5
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 7.5
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 27 7.5
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 27 7.5
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 27 9.9
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 27 9.9
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 27 9.9
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 9.9
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 9.9
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 27 9.9
AF002198-9|AAF99936.1| 450|Caenorhabditis elegans Hypothetical ... 27 9.9
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 27 9.9
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 27 9.9
AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical... 27 9.9
AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical... 27 9.9
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 494 PGLLSIQPCFYQDINVDIPLEFQRIVRHLYH 586
P ++ I+PCFYQDI V+IP++FQ+ V Y+
Sbjct: 123 PTIIPIEPCFYQDIEVEIPVQFQKTVTFAYY 153
Score = 35.1 bits (77), Expect = 0.037
Identities = 30/107 (28%), Positives = 45/107 (42%)
Frame = +1
Query: 121 DNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLSNSNQHNRQSC 300
DNPF+DP P + ++ T+ T ED+NPF N SN+ QS
Sbjct: 3 DNPFADPFSAPPPPPAAAAAASKPTSGGTIETEDFNPF-----ANRAGGSNAQPTTHQST 57
Query: 301 RLCHHQPAASTQDPHSRLQRLHQISQLLIFRGGKRS*NGRPRSWRGG 441
++ A + + Q L + +Q L R + + R RS GG
Sbjct: 58 GSLGNKSAGMDDELFRKQQDLERRAQELRMR--EEELDRRQRSAAGG 102
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 44.4 bits (100), Expect = 6e-05
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 494 PGLLSIQPCFYQDINVDIPLEFQRIVRHLYH 586
P ++ I+PCFYQDI V+IP++FQ+ V Y+
Sbjct: 123 PTIIPIEPCFYQDIEVEIPVQFQKTVTFAYY 153
Score = 35.1 bits (77), Expect = 0.037
Identities = 30/107 (28%), Positives = 45/107 (42%)
Frame = +1
Query: 121 DNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLSNSNQHNRQSC 300
DNPF+DP P + ++ T+ T ED+NPF N SN+ QS
Sbjct: 3 DNPFADPFSAPPPPPAAAAAASKPTSGGTIETEDFNPF-----ANRAGGSNAQPTTHQST 57
Query: 301 RLCHHQPAASTQDPHSRLQRLHQISQLLIFRGGKRS*NGRPRSWRGG 441
++ A + + Q L + +Q L R + + R RS GG
Sbjct: 58 GSLGNKSAGMDDELFRKQQDLERRAQELRMR--EEELDRRQRSAAGG 102
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 481 TGRPSRASVHTAVLLPGYQRRHTTRVPEDRPSSIP 585
TGRP R S T G R + PEDRP+ P
Sbjct: 423 TGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSP 457
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 481 TGRPSRASVHTAVLLPGYQRRHTTRVPEDRPSSIP 585
TGRP R S T G R + PEDRP+ P
Sbjct: 444 TGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSP 478
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 481 TGRPSRASVHTAVLLPGYQRRHTTRVPEDRPSSIP 585
TGRP R S T G R + PEDRP+ P
Sbjct: 429 TGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSP 463
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 238 GQQNVNNPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQ 369
GQQ N P N+ Q Q R H Q Q + +HQ
Sbjct: 17 GQQQQNQPSQQNNQQQQNQGARQQHPQQMQQQQQSNQSAHFMHQ 60
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +1
Query: 238 GQQNVNNPRLSNSNQHNRQSCRLCHHQPAASTQDPHSRLQRLHQ 369
GQQ N P N+ Q Q R H Q Q + +HQ
Sbjct: 141 GQQQQNQPSQQNNQQQQNQGARQQHPQQMQQQQQSNQSAHFMHQ 184
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 398 ARGARTEGRGVGAAGSGTPRGVGGSP 475
A GA +G G GA G P+G G+P
Sbjct: 172 APGAPGQGSGAGAPGPAGPKGASGAP 197
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAASENQQL 376
PP+P P+P P P P +L P + Q L
Sbjct: 782 PPSPLTAPIPPPPPPPPPMLPPQQSQLAQSL 812
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAASENQQL 376
PP+P P+P P P P +L P + Q L
Sbjct: 681 PPSPLTAPIPPPPPPPPPMLPPQQSQLAQSL 711
>Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical
protein T19B10.4b protein.
Length = 125
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = +1
Query: 166 PSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLSNSNQHNRQSCRLCHHQP 321
P +Q + NN G N G N NN N N NR R HHQP
Sbjct: 14 PIKRQPTTNNNNKKAGNNSNNQKKGN-NQNNKNNKNQNGGNRNQNRQ-HHQP 63
>Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical
protein T19B10.4a protein.
Length = 243
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/52 (36%), Positives = 21/52 (40%)
Frame = +1
Query: 166 PSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLSNSNQHNRQSCRLCHHQP 321
P +Q + NN G N G N NN N N NR R HHQP
Sbjct: 14 PIKRQPTTNNNNKKAGNNSNNQKKGN-NQNNKNNKNQNGGNRNQNRQ-HHQP 63
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -3
Query: 510 MDRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAAS 391
M R AA G PP RG P PAAP P + L A+
Sbjct: 32 MGRVSRPAAPARGAPPAARGRPAPAAPANVPGLDPRLLAA 71
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 465 PTPRGVPLPAAPTPRPSVLAPL 400
PT R P+PA+P PRP P+
Sbjct: 98 PTIRPPPIPASPPPRPPASEPV 119
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 465 PTPRGVPLPAAPTPRPSVLAPL 400
PT R P+PA+P PRP P+
Sbjct: 320 PTIRPPPIPASPPPRPPASEPV 341
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 404 GARTEGRGVGAAGSGTPRGVGGSPQ*LAAP 493
GA + G GVGA G+ P G GSP AP
Sbjct: 209 GAPSFGGGVGAPGAPGPAGDAGSPGQPGAP 238
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 160 ADPSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLS 270
AD ++V R R DYNP + +NNP+ S
Sbjct: 218 ADEDFREVIRLIKELNRSYPDYNPLFEFEKLNNPQNS 254
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 477 CGDPPTPRGVPLPAAPTPRPSVLAPLA 397
C PP P P P P P+P+ + P++
Sbjct: 509 CNRPPLPPLPPPPPPPKPKPAPVQPIS 535
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 507 DRSPGGAASYCGDPPTPRGVPLP-AAPTPRPSVLAPLAAS 391
D + GGAA P P P P AAP P P LA S
Sbjct: 95 DYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPS 134
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 477 CGDPPTPRGVPLPAAPTPRPSVLAPLA 397
C PP P P P P P+P+ + P++
Sbjct: 509 CNRPPLPPLPPPPPPPKPKPAPVQPIS 535
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -3
Query: 483 SYCGDPP--TPRGVPLPAAPTPRP-SVLAPLAA 394
+YC PP P P+ A P PRP V AP A
Sbjct: 184 TYCAVPPCPAPAATPVYAQPAPRPMPVYAPAPA 216
>AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical
protein Y71F9AL.9 protein.
Length = 314
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAAS 391
P T + P PA P P+V AP ++S
Sbjct: 86 PETTQSAPAPAKAAPAPTVAAPASSS 111
>Z93239-2|CAB07529.2| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 442 KRNSARGRRVATITGRPSRASVHTAVLLPGYQRRH 546
+ NSA +R +T+TG S++ + GYQ+ H
Sbjct: 154 RANSAESKRQSTLTGAKKTVSINEQI--TGYQKTH 186
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 471 DPPTPRGVPLPAAPTPRPSVLAP 403
DPP P V P P P P V AP
Sbjct: 775 DPPAPLPVLPPVVPAPAPVVPAP 797
>Z69660-2|CAD57697.1| 1218|Caenorhabditis elegans Hypothetical
protein H03A11.2 protein.
Length = 1218
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 442 KRNSARGRRVATITGRPSRASVHTAVLLPGYQRRH 546
+ NSA +R +T+TG S++ + GYQ+ H
Sbjct: 154 RANSAESKRQSTLTGAKKTVSINEQI--TGYQKTH 186
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 501 SPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAP 403
S G + S +P G P P+ P PRP LAP
Sbjct: 297 SNGASPSVSPASTSPSG-PAPSIPPPRPPALAP 328
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 404 GARTEGRGVGAAGSGTPRGVGGSPQ*LAAPP 496
G T G G G G G PRG S PP
Sbjct: 63 GESTRGGGTGRGGRGRPRGSKNSDGGAGGPP 93
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 507 DRSPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAPLAAS 391
D +PG A+YC P PR L A P+ AP AA+
Sbjct: 262 DGAPGTDAAYC--PCPPRSAALGAGGGAEPAGAAPEAAA 298
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -3
Query: 462 TPRGVPLPAAPTPRPSVLAPLAASENQQL 376
TP+ P P P P P AP E Q+
Sbjct: 118 TPQVAPAPETPAPAPETPAPAPVQETPQV 146
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 501 SPGGAASYCGDPPTPRGVPLPAAPTPRPSVLAP 403
S G + S +P G P P+ P PRP LAP
Sbjct: 297 SNGASPSVSPASTSPSG-PAPSIPPPRPPALAP 328
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 513 CMDRSPGGAASYCGDPPTPRGVPLPAAPTPR 421
C+ P C PP P +P P P PR
Sbjct: 169 CIGGPPHCECENCPKPPPPPPIPPPGPPPPR 199
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -3
Query: 513 CMDRSPGGAASYCGDPPTPRGVPLPAAPTPR 421
C+ P C PP P +P P P PR
Sbjct: 169 CIGGPPHCECENCPKPPPPPPIPPPGPPPPR 199
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 447 PLPAAPTPRPSVLAPL 400
PLP PTP PS L P+
Sbjct: 90 PLPTLPTPPPSTLPPI 105
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +2
Query: 317 SQQPVHKTRTAGFSASTKFHNC*FSEAARGARTEGRGVGAAGSGTPRGVGGSPQ*LAAPP 496
S+ P+ + RT+ F + FSE+ G G +G T R PQ L P
Sbjct: 76 SKPPIKERRTSLFEDAISTVRAKFSESLSGRMAGLNIAGGSGQQTDRSQSSEPQALVCIP 135
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 498 PGGAASYCGDPPTPRGVPLPAAPTP 424
PGGA S+ G PP RG P P
Sbjct: 44 PGGAGSFFGVPPAARGRGGPGMAPP 68
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 498 PGGAASYCGDPPTPRGVPLPAAPTP 424
PGGA S+ G PP RG P P
Sbjct: 53 PGGAGSFFGVPPAARGRGGPGMAPP 77
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 498 PGGAASYCGDPPTPRGVPLPAAPTP 424
PGGA S+ G PP RG P P
Sbjct: 44 PGGAGSFFGVPPAARGRGGPGMAPP 68
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 315 PASSQYTRPAQQASAPPP 368
P+SS Y PA A APPP
Sbjct: 265 PSSSSYLAPAVPARAPPP 282
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 315 PASSQYTRPAQQASAPPP 368
P+SS Y PA A APPP
Sbjct: 445 PSSSSYLAPAVPARAPPP 462
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 471 RHNNWPPLPGFCPYSR 518
RHNNWP G C ++R
Sbjct: 1272 RHNNWPNHSGRCSFAR 1287
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 471 RHNNWPPLPGFCPYSR 518
RHNNWP G C ++R
Sbjct: 1313 RHNNWPNHSGRCSFAR 1328
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 465 PTPRGVPLPAAPTPRPSVLAPLAA 394
P P P+ AAP P P AP AA
Sbjct: 74 PAPLPAPVFAAPAPAPVFAAPFAA 97
>AF002198-9|AAF99936.1| 450|Caenorhabditis elegans Hypothetical
protein F35F10.11 protein.
Length = 450
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 115 FEDNPFSDPTIDNPFADPSVQQVARSTNNATRGLEDYNPFDGQQNVNNPRLSNSNQ 282
++ +P P+ P P T+++ +G + P D NVN+ ++ N N+
Sbjct: 337 YQQDPNLPPSKPTPIGAPPPGYGPLPTDDSEKGADAPYPLDLYPNVNDEKVPNPNE 392
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 507 DRSPGGAASYCGDPPTPRGVPLPAAPT 427
D +PGG A+YC P R V + AAP+
Sbjct: 263 DAAPGGDAAYC--PCPTRSVAVEAAPS 287
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 468 PPTPRGVPLPAAPTPRPSVLAPLAASENQQ 379
P TP+ P P A TP P L P A +E+ Q
Sbjct: 273 PATPQ--PSPPAVTPPPPRLLPAATTESHQ 300
>AC006651-11|AAM48540.1| 428|Caenorhabditis elegans Hypothetical
protein H06I04.1b protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 312 PPASSQYTRPAQQASAPPPNFTT 380
PP SS +P + PPPN T
Sbjct: 12 PPGSSSSAKPVTSSKKPPPNDVT 34
>AC006651-10|AAF39866.2| 456|Caenorhabditis elegans Hypothetical
protein H06I04.1a protein.
Length = 456
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 312 PPASSQYTRPAQQASAPPPNFTT 380
PP SS +P + PPPN T
Sbjct: 12 PPGSSSSAKPVTSSKKPPPNDVT 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,249,419
Number of Sequences: 27780
Number of extensions: 282124
Number of successful extensions: 1611
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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