Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021907
(570 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0502 - 3659564-3659660,3659923-3660061,3660161-3660238,366... 36 0.023
10_08_0904 + 21464762-21467479 34 0.092
05_05_0284 + 23851033-23851279,23851514-23851827 32 0.28
06_01_0201 - 1546455-1546652,1547124-1547201,1548217-1548402,154... 31 0.49
05_04_0158 + 18613265-18615304 31 0.65
08_01_0243 + 2011891-2012403 31 0.85
07_03_0565 - 19561078-19561425,19562253-19563746 31 0.85
04_01_0100 + 1034057-1034308,1034962-1035078,1035152-1035382,103... 31 0.85
05_03_0677 - 16863260-16863778 30 1.1
04_04_0976 + 29839697-29840350 30 1.1
01_01_1134 + 8994315-8995892 30 1.1
02_05_1095 - 34076910-34077431 30 1.5
02_05_0350 - 28179063-28179584,28179674-28180041,28180179-281802... 30 1.5
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 29 2.0
01_01_1108 + 8758486-8758815,8758913-8758960,8761512-8761664,876... 29 2.0
09_02_0283 + 6819086-6820270 29 2.6
08_02_0645 - 19666189-19666209,19666330-19666437,19667041-196671... 29 2.6
07_03_1750 - 29207692-29208225 29 2.6
01_07_0307 + 42647006-42647202,42647287-42647866 29 2.6
01_05_0648 + 23915469-23915898,23916551-23916619,23916956-239173... 29 2.6
12_02_1154 - 26540090-26540653 29 3.4
02_05_0397 + 28641033-28641231,28641385-28641485,28642012-286420... 29 3.4
01_02_0059 - 10701859-10701963,10702034-10702153,10702534-107026... 29 3.4
01_01_0070 - 542603-542686,542803-543441 29 3.4
12_02_1279 + 27510605-27513301 28 4.6
12_02_1118 + 26210322-26212559 28 4.6
12_02_0495 - 19698041-19698116,19698291-19698312,19698592-196986... 28 4.6
11_06_0145 - 20615044-20617167,20617444-20618076 28 4.6
10_05_0075 + 8869087-8869413,8869823-8870053,8871145-8871267,887... 28 4.6
08_01_0323 - 2903700-2903795,2903817-2903916,2904068-2904183,290... 28 4.6
07_03_0287 - 16283460-16283658,16283696-16283802 28 4.6
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 28 4.6
01_05_0124 - 18380313-18380518,18380532-18380895 28 4.6
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 28 6.0
08_02_0813 + 21459776-21461128 28 6.0
06_01_0560 - 3977456-3977527,3978069-3978182,3978264-3978335,397... 28 6.0
04_04_0499 + 25674024-25674233,25674515-25675072,25675320-256754... 28 6.0
02_05_0662 + 30703820-30704671 28 6.0
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 28 6.0
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312... 28 6.0
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 28 6.0
01_05_0231 - 19545298-19545372,19545499-19545644,19545839-19546211 28 6.0
01_01_0485 - 3576989-3577173,3577476-3577795,3577895-3578178,357... 28 6.0
12_02_0304 + 17112677-17113195 27 8.0
12_01_0589 + 4801332-4801573,4801696-4801815,4802540-4802927,480... 27 8.0
11_02_0151 + 8837444-8837876,8838173-8839434,8839517-8839885,883... 27 8.0
10_08_0222 - 15983756-15984313 27 8.0
10_08_0062 + 14586613-14586966 27 8.0
07_03_1071 + 23753883-23754752 27 8.0
06_01_1013 - 7931756-7935109 27 8.0
06_01_0690 + 5033943-5034740 27 8.0
03_05_0198 + 21890523-21891002 27 8.0
03_02_0765 + 11000724-11002496 27 8.0
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 27 8.0
02_02_0081 - 6608901-6609680,6610380-6610808,6610893-6610994,661... 27 8.0
01_05_0490 + 22672241-22674679 27 8.0
01_05_0471 + 22535477-22535609,22535714-22535808,22535929-225360... 27 8.0
>02_01_0502 -
3659564-3659660,3659923-3660061,3660161-3660238,
3660486-3660654,3660757-3660873,3660956-3661102,
3661203-3661388,3661472-3661720,3662196-3662432,
3662511-3662673,3662748-3662866,3662976-3663068,
3663595-3663735,3663813-3663896,3663974-3664084,
3664162-3664260,3664501-3664623,3664908-3664958,
3665152-3665275,3665357-3665514,3665595-3665709,
3665931-3666060,3666163-3666328,3667047-3667136,
3667650-3667857,3668270-3668439,3668542-3668577
Length = 1199
Score = 35.9 bits (79), Expect = 0.023
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +1
Query: 271 RYALTPKILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHN 450
RY + P+ L L +S LLQG AL+A+ ++LV + A S LL L+ + Q
Sbjct: 705 RYKVLPQALILIRSALLQGQALQALQRFFASLVQS--ANTSFDTLLDSLISTAKPSQSGG 762
Query: 451 ATAHHXXQAFHSLSKCVA 504
QA S+++CVA
Sbjct: 763 LA----KQALSSIAQCVA 776
Score = 30.7 bits (66), Expect = 0.85
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
IDL+ +L + L +FLRK RA Y I ++ E+ L+
Sbjct: 614 IDLSCVLDHVISELTAFLRKANRALRQATLGTLNSLVVAYGGQIG-SSYETIIAELSTLI 672
Query: 182 CEQDLHCAQTALAL 223
+ DLH TALAL
Sbjct: 673 SDMDLH--MTALAL 684
>10_08_0904 + 21464762-21467479
Length = 905
Score = 33.9 bits (74), Expect = 0.092
Identities = 31/80 (38%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Frame = +3
Query: 195 CTARRRLWRW---CGPPVCAVPPPH----RGRALRSHAQNTRARQ--VAATPRRRSQSNV 347
C AR+R WRW P PPPH RAL HA+ +Q P R + S V
Sbjct: 4 CAARQRQWRWPLLHRSPRPTPPPPHGLHPPRRALAEHARMPAEQQQPPPVAPARVTFSRV 63
Query: 348 GRPECAGVGRRGGLFAPRAA 407
+ CA GR L A RAA
Sbjct: 64 FQ-SCAQAGRE-ALAAGRAA 81
>05_05_0284 + 23851033-23851279,23851514-23851827
Length = 186
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 300 ARQVAATPRRRSQSNVGRPECAGVGRRGGLFAPRAACLVGDACASLARAQRYR 458
ARQ AAT R + V R + A R GL A A+ A A+ +RA R +
Sbjct: 10 ARQAAATSRAARLAAVARHDAAAASRSAGLAAAAASRAARLAAAAASRAARLK 62
>06_01_0201 -
1546455-1546652,1547124-1547201,1548217-1548402,
1548909-1548919,1549256-1549568
Length = 261
Score = 31.5 bits (68), Expect = 0.49
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 157 ANGGAGLGVRAGPALRADGSGAGAVRLSALS-RRLTADARYALTPKIL-ALAKSPLLQGG 330
A GGAG A + A SG G AL+ RRL + AL + A A L+
Sbjct: 11 AGGGAGAESGAEGSSSAGSSGGGGELAEALARRRLYREVTLALRTGLRDAKADFSFLRAR 70
Query: 331 ALKAMLGVLSALVSADE 381
L+++LG L + SA +
Sbjct: 71 GLRSLLGFLRSTASATD 87
>05_04_0158 + 18613265-18615304
Length = 679
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/112 (25%), Positives = 46/112 (41%)
Frame = +1
Query: 202 RADGSGAGAVRLSALSRRLTADARYALTPKILALAKSPLLQGGALKAMLGVLSALVSADE 381
+ D G + L +S R D +++ P ++ A PLL+ G + ++ V+
Sbjct: 266 KTDVFSFGILLLEIMSGRKAIDVQHS-PPSVVEWAV-PLLRKGKVASLF---DPRVAPPR 320
Query: 382 AGCSRRELLALLVMPVRRLQEHNATAHHXXQAFHSLSKCVAAGWWRGXPEAG 537
+RR+L AL VR +E + LSK V+ W G G
Sbjct: 321 DPVTRRDLAALAASCVRSCRERRPSMADIVDRLVVLSKAVSGKMWNGLAVVG 372
>08_01_0243 + 2011891-2012403
Length = 170
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 331 ALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATA 459
AL+ ++ + + ++A+E RR+LLAL VR+LQE A A
Sbjct: 106 ALRGVVAMDVSGMAAEEVEAHRRKLLALKAAVVRKLQEKAAAA 148
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 30.7 bits (66), Expect = 0.85
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 237 VCAVPPPHRGRALRSHAQNTRARQVA--ATPRRRSQS-NVGR--PECAGVGR-RGGLFAP 398
V +PPP R+ + + A + ATP+RR S +V R P CA VGR GG+F
Sbjct: 370 VADIPPPPSRRSCYVPGRRSVAAPPSHMATPQRRRNSVDVPRRLPACASVGRGEGGVFGR 429
Query: 399 RAACLVG 419
A G
Sbjct: 430 HATTTGG 436
>04_01_0100 +
1034057-1034308,1034962-1035078,1035152-1035382,
1038200-1038455,1038551-1038807,1038978-1039250,
1039617-1039898,1040045-1040165,1040351-1040520,
1040613-1040711
Length = 685
Score = 30.7 bits (66), Expect = 0.85
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +3
Query: 231 PPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNVGRPE-CAGVGRRGGLFAPRAA 407
PP+ A PP G+A A + R R Q C VG+ G + ++
Sbjct: 49 PPLSATPPKDEGKANGGGAVVAEKKSKRQLKRERKQEQKSSSHLCIEVGKSGNV----SS 104
Query: 408 CLVGDAC 428
C GD+C
Sbjct: 105 CKYGDSC 111
>05_03_0677 - 16863260-16863778
Length = 172
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 151 QGANGGAGLGVRAGPALRADGSGAGAVRLSALS-RRLTADARYALTPKILALAKSPLLQG 327
+GA GGAG R G +R G G +R ALS RRL A R A +L LA S + G
Sbjct: 46 RGAAGGAGRW-RRGWRVRRRGLGRRILR--ALSPRRLLARLRDAYVRGMLRLASSAAVAG 102
Query: 328 G 330
G
Sbjct: 103 G 103
>04_04_0976 + 29839697-29840350
Length = 217
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 198 TARRRLWRWCGPPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQS 341
T RRR W+ PP PP G++ RS +Q R A +P RRS S
Sbjct: 171 TTRRRCWQRRRPP----PPSRCGKSYRS-SQGRRRDSRAHSPGRRSPS 213
>01_01_1134 + 8994315-8995892
Length = 525
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +1
Query: 154 GANGGAGLGVRAGPALRADGSGAGAVRLSALSRRLTADARYALTPKILALAKSP 315
GANGG G A A R G+G R SR R A+T + + +SP
Sbjct: 119 GANGGGGAAAAAASAHRGKKPGSGQ-RWGLFSRDCPCAGRKAVTVDVASEPRSP 171
>02_05_1095 - 34076910-34077431
Length = 173
Score = 29.9 bits (64), Expect = 1.5
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Frame = -3
Query: 451 RCALASDAQASPTRQAARGANSPPRRPT--PAHSGRPTLL*ERRLGVAATWRARVF---- 290
RC+L + + S +AA +SPP PT PA G L RR+G +A R
Sbjct: 62 RCSLHKEQKRSVHHKAAAAPSSPP-SPTSPPASGGAVRLGGARRMGGSALVRIGAVESGQ 120
Query: 289 WA*ERSA---RPR*GGGTAQ----TGGPHQRQSRLRAVQVLLAHQGRHLH*H 155
WA A RP AQ G R SRL AV + G + H H
Sbjct: 121 WARRALAATIRPSPAAQQAQHRRRVAGLRPRPSRLSAVSMAGDRAGDNHHHH 172
>02_05_0350 -
28179063-28179584,28179674-28180041,28180179-28180270,
28180366-28180412
Length = 342
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = -1
Query: 417 QQGKQLAARTARLVGRHQRT------QDAQHCFESAALE*RRLGEREYFGRESVARVRGE 256
+QG+QL A V RH R + A ALE R R E +AR+R E
Sbjct: 168 EQGEQLRRAMADRVRRHNRALLVAAERSAARRLREKALEAEREARRGAELEERLARLRSE 227
Query: 255 AAGQRRQADRTSARAV 208
AA + +A A AV
Sbjct: 228 AAAWQAKALSEQAAAV 243
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 201 ARRRLWRWCGPPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNV-GRPECAGVGR 377
A RL W PP PPP +A + A+ AAT S S+ P AG R
Sbjct: 6 ALERLASWPTPPPPPPPPPPPAKAAAAEAERPCPPSSAATTSSSSSSSASAAPAAAGAPR 65
>01_01_1108 +
8758486-8758815,8758913-8758960,8761512-8761664,
8761749-8761847,8761884-8761991,8762078-8762200,
8763030-8763287
Length = 372
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 154 GANGGAGLGVRAGPALRADGSGAG 225
G GG G GV AGP + G G G
Sbjct: 4 GGGGGGGGGVMAGPGVAGGGGGGG 27
>09_02_0283 + 6819086-6820270
Length = 394
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 94 PSRHSGTEL*SCHQH*TFEQGANGGAGLGVR-AGPALRADGSGAGAVRLSALSRRLTADA 270
P+RH T H H +GA+G + +G A+ D G AL L A
Sbjct: 81 PARHGATSPPQPHSHVRLMRGASGDRVCALSLSGLAVARDALGMDD---DALVVALKAPG 137
Query: 271 RYALTPKILALAKSPLLQGGALKAMLG 351
+ + P + A+ + GGA + LG
Sbjct: 138 VWRVDPVLAAVGDRVVAMGGACRLALG 164
>08_02_0645 -
19666189-19666209,19666330-19666437,19667041-19667152,
19667321-19667417,19667809-19667911,19668071-19668152,
19668519-19668665,19668763-19668863,19669037-19669231
Length = 321
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -2
Query: 482 WNACXIWCAVALCSCKRRTGITNKASSSRREQPASSADTSALRTPNIALRA 330
W+ C AVALC + + + A++ RR A A SA P ALRA
Sbjct: 2 WSRCSAGSAVALCGGRGGHRLLSCAAARRR---APGASASAKGIPRSALRA 49
>07_03_1750 - 29207692-29208225
Length = 177
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -3
Query: 451 RCALASDAQASPTRQAARGANSPPRRPTPAHSGRPTL 341
R LAS A+A R+ GA PP PA RP L
Sbjct: 80 RAILASRARACALRRVRLGAPPPPPAARPAPRSRPPL 116
>01_07_0307 + 42647006-42647202,42647287-42647866
Length = 258
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 136 H*TFEQGANGGAGLGVRAGPALRADGSGAGAV--RLSALSRRLTADARYALTPKILALAK 309
H TF++ +G GL V P + + A +S S + + DAR P IL L +
Sbjct: 38 HVTFDR-FHGFQGLPVELQPEVAGNAPSASKTVFGVSTESMQCSYDARGNSVPSILLLMQ 96
Query: 310 SPLLQGGALKAMLGVLSALVSADEA 384
L + G LKA G+ ++AD+A
Sbjct: 97 RRLYEQGGLKAE-GIFR--IAADDA 118
>01_05_0648 +
23915469-23915898,23916551-23916619,23916956-23917315,
23918435-23918973
Length = 465
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +1
Query: 148 EQGANGGAGLGVRAGPALRADGSGAGAVRLSALSRRLTADARYALTPKILALAKSPLLQG 327
E A GG G G R A +A G G G V + L A +A+ ++ +
Sbjct: 314 EAAACGGGG-GRRRDQAGQAAGGGGGVVEV------LAATCGHAVVVAVVVVVAVAAAAA 366
Query: 328 GALKAMLGVLSALVSADEAGCSR 396
G+ + + L A +AD+AG +R
Sbjct: 367 GSRRGGVPQLRATTAADDAGGTR 389
>12_02_1154 - 26540090-26540653
Length = 187
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = -1
Query: 429 HRHHQQGKQLAARTARLVGRHQRTQDAQHCFESAALE*RRLGEREYFGRESVARVRGEAA 250
H HH + LAA A L + S A+E RR ER RE R GE A
Sbjct: 15 HHHHHHRRALAASPAALAAAGNGLSATRRVRRSPAVEMRRERERRR-AREQQPRC-GEVA 72
Query: 249 G 247
G
Sbjct: 73 G 73
>02_05_0397 +
28641033-28641231,28641385-28641485,28642012-28642068,
28642087-28642295,28642378-28642924
Length = 370
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 175 LGVRAGPALRA--DGSGAGAVRLSALSRRLTADARYA-LTPK 291
LG RA P LRA DG GAG L LTAD YA +TP+
Sbjct: 253 LGCRADPVLRAPRDGGGAGCAEPDLLG-LLTAD--YAVMTPR 291
>01_02_0059 -
10701859-10701963,10702034-10702153,10702534-10702609,
10702897-10703276
Length = 226
Score = 28.7 bits (61), Expect = 3.4
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 204 RRRLWRWCGPPVCAVPPPHRGRALR-SHAQNTRARQVAATPRRRSQSNVGRPECAGVGRR 380
RR + R PP PPP A+ S A+++ AA+ RRS G C G G R
Sbjct: 70 RRLVRRQARPPPS--PPPSSSSAVEPSAAESSAVESFAASAGRRSPFFRG---CWGGGGR 124
Query: 381 GGLFAPRAACLVGDACASLARAQRYRTPYXT 473
GG ++ A V A+ + ++ R P+ T
Sbjct: 125 GGWYSGVA---VPRGAAARSWQEQRRCPHKT 152
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 439 ASDAQASPTRQAARGANSPPRRPTPAHSGRPT 344
A+ AQ +PT A SPP TPA + PT
Sbjct: 31 AAPAQPTPTPVPTAPAKSPPAPATPAPTATPT 62
>12_02_1279 + 27510605-27513301
Length = 898
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 SALSRRLTADARYALTPKILALAKSPLLQGGALKAMLGVLSALVSAD-EAGCSRRELLAL 414
+ + +RL A A +++ +A L + AL+ + +SA++ EAG R ELL
Sbjct: 789 AVVDQRLEGRADVAQVERVVRVALCCLHEDAALRPAMTTVSAMLDGSMEAGVPRTELLDY 848
Query: 415 LVMPVRRLQEHNATAH 462
L + R L + + H
Sbjct: 849 LRLYGRGLVDVRSGLH 864
>12_02_1118 + 26210322-26212559
Length = 745
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 409 ALLVMPVRRLQEHNATAHHXXQAFHSLSKCV 501
A++VMP ++ +H+ T A+H+++K V
Sbjct: 503 AIVVMPYHKMLQHDGTFQSLGSAYHAINKRV 533
>12_02_0495 -
19698041-19698116,19698291-19698312,19698592-19698644,
19698720-19698848,19701012-19701127
Length = 131
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -1
Query: 342 CFESAALE*RRLGEREYFGRESVARVRGEAAGQRRQA--DRTSA-RAVCAQCRSCSHTKA 172
CF E R E E AR + A QRRQ DR++A RA AQ ++ K
Sbjct: 6 CFGGGGAERERRAEAE-LAESKEARAKAAEAAQRRQEEFDRSAAGRAAKAQMKAMKEAKT 64
Query: 171 GTS 163
++
Sbjct: 65 SSN 67
>11_06_0145 - 20615044-20617167,20617444-20618076
Length = 918
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 316 LLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMP-VRRLQE 444
LL+ G L++ G + L+ D GC R +A L+MP V+RL E
Sbjct: 81 LLRFGELRSAHGRIPRLIFWDLLGCYRVSKVASLMMPQVKRLCE 124
>10_05_0075 +
8869087-8869413,8869823-8870053,8871145-8871267,
8871873-8872091
Length = 299
Score = 28.3 bits (60), Expect = 4.6
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 264 GRALRSHAQNTRARQVAATPRRRSQSNVGRPECAGVGRRGGLFAPRAACLVGDACASLAR 443
GRA R + + RAR R Q++ GR C GRRG + A ++ A +S A
Sbjct: 15 GRAARWSSASPRARPPRRHRRHLHQASSGRRCC--YGRRGVVGAAQSTGGHIPAGSSSAA 72
Query: 444 AQRYRTPYXTGVP 482
A R P+ P
Sbjct: 73 AYACRPPFTVDAP 85
>08_01_0323 -
2903700-2903795,2903817-2903916,2904068-2904183,
2904273-2904561,2905520-2905548,2906154-2906294
Length = 256
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 207 RRLWRWC-GP--PVCAVPPPHR-GRALRSHAQNTRARQVAATPRR 329
R W W GP P+ VPPP R GRA R ++ + AR+ RR
Sbjct: 7 RGSWLWSLGPLVPLLLVPPPPRAGRAPRGCSRRSAARRRGERLRR 51
>07_03_0287 - 16283460-16283658,16283696-16283802
Length = 101
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 148 EQGANGGAGLGVRAGPALRA--DGSGAGAVRLSALSRR 255
E G+ GG G G GP+ R+ G G+GA + RR
Sbjct: 38 EGGSGGGGGGGGDGGPSRRSRWRGGGSGAAAVETAERR 75
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 418 PTRQAARGANSPPRRPTPAHSGRPTL 341
P RQAA A SPP P+P P+L
Sbjct: 142 PGRQAASRAPSPPAPPSPPQDPAPSL 167
>01_05_0124 - 18380313-18380518,18380532-18380895
Length = 189
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 249 PPPHRGRALRSHAQNTRARQVAATPRRRSQSNV 347
PPPH+G H+Q +R A+ RRS SN+
Sbjct: 60 PPPHQGH----HSQEAGSRSAASLSWRRSGSNM 88
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Frame = -3
Query: 436 SDAQASPTRQAARGANSPPRRP------TPAHSGRPTL 341
S A+ASP +AA A P +P PA SGRPT+
Sbjct: 331 SPARASPEEKAADAAARPKLKPLHWDKVRPASSGRPTV 368
>08_02_0813 + 21459776-21461128
Length = 450
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 172 GLGVRAGPALRADGSGAGAVRLSALSRRLTADARYALTPKILALAKSPLL 321
G+ R G +R SGA VRL + R A R A+ I ++A S L+
Sbjct: 360 GVAARGGGRMRVTKSGARGVRLEG-AERGGAKGRLAVAADIFSVAPSVLV 408
>06_01_0560 -
3977456-3977527,3978069-3978182,3978264-3978335,
3978428-3978497,3978608-3978705,3978791-3978992,
3979074-3979141,3979960-3980358
Length = 364
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = -3
Query: 358 SGRPTLL*ERRLGVAA------TWRARVFWA*ERSARPR*GGGTAQTGG 230
SGRPT V A TW+ RV + + AR GGG A+ GG
Sbjct: 54 SGRPTAAAAFHTAVTASGSLYNTWQCRVMYYWFKRAREAGGGGGAEMGG 102
>04_04_0499 +
25674024-25674233,25674515-25675072,25675320-25675415,
25675509-25675601,25675882-25676125,25676239-25676276,
25676377-25676478
Length = 446
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = -3
Query: 430 AQASPTRQAARGANSPPRRPTPAHSGRPTLL*ERRLGVAATWRARVFWA*ERSARPR*GG 251
A ASP A A PP P PA + RP L+ E + V R V +++A+ + GG
Sbjct: 180 AVASPAPSPAVAAVPPPP-PPPAAAPRPPLVVEEEVEV----RKEVVVVEQKAAKAKSGG 234
Query: 250 G 248
G
Sbjct: 235 G 235
>02_05_0662 + 30703820-30704671
Length = 283
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 273 LRSHAQNTRARQVAATPRRRSQSNVGRPECAGVGRRGGLFAPRAACLVGDACASLARAQR 452
LR HA T AR+ A + + + + RGGL PR A L+ ++ R
Sbjct: 100 LRKHAAWTDARRAEAAGIASAARRLREKDLRSLAARGGLVNPRMAELIASVSDAMESDVR 159
Query: 453 Y 455
+
Sbjct: 160 H 160
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -3
Query: 448 CALASDAQASPTRQAARGANSPPRRPTP--AHSGRP 347
CA S +PTR A + PPR P P H G P
Sbjct: 47 CASPSSTTPTPTRWGAGASAVPPRCPGPQDQHHGLP 82
>02_03_0388 +
18429538-18430598,18430971-18431081,18431165-18431237,
18431513-18431695
Length = 475
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 418 PTRQAARGANSPPRRPTPAHSGRPT 344
P RQAA A SPP P+P + P+
Sbjct: 66 PGRQAASRAPSPPAPPSPPQASAPS 90
>01_06_1164 - 35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 27.9 bits (59), Expect = 6.0
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Frame = +1
Query: 157 ANGGAGLGVRAGPALRADGSGAG---------AVRLSALSRRLTADARYALTPKILALAK 309
A+GG+G G+ + G GAG R L+ RL A+A AL + A A
Sbjct: 1194 ASGGSGSGISGSGGISRLGGGAGEEHEAVVRELTRGHELTARLRAEALRALRGQGQAEAT 1253
Query: 310 SPLLQGGALKAMLGVLSALVSA 375
+ + G +A LS + SA
Sbjct: 1254 ATFILGEVSRAFTVCLSIMASA 1275
>01_05_0231 - 19545298-19545372,19545499-19545644,19545839-19546211
Length = 197
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 181 VRAGPALRADGSGAGAVRLSALSRRLTADARYALTPKILALAKSPLLQGGALKAMLGVLS 360
VR PA+ A + A + ++A + R+ A ++ A A +PLL A+ G+
Sbjct: 51 VRLRPAVEAAAAAARLLPVAAAAARMLLAAAAPARLRLAAAAAAPLLLAAAVLCQCGLRR 110
Query: 361 ALVSADEAGCSR 396
L + C R
Sbjct: 111 PLWCGCDLQCWR 122
>01_01_0485 -
3576989-3577173,3577476-3577795,3577895-3578178,
3579780-3580095,3580441-3580859
Length = 507
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 376 RPTPAHSGRPTLL*ERRLGVAATWRARVF 290
+P +HS P L RR G WR VF
Sbjct: 42 KPRSSHSAAPWKLPRRRAGAMPLWRVAVF 70
>12_02_0304 + 17112677-17113195
Length = 172
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 445 ALASDAQASPTRQAARGANSPPRRPTPAHSGRPT 344
A A Q P R R SP R P+P+ + PT
Sbjct: 22 AEAQQPQTPPRRNPPRAPPSPRRAPSPSVTAEPT 55
>12_01_0589 +
4801332-4801573,4801696-4801815,4802540-4802927,
4803528-4803865,4804514-4804598
Length = 390
Score = 27.5 bits (58), Expect = 8.0
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 151 QGANGGAGLGVRAGPALRADGSGAGAVRLSALSRRL---TADARYALTPKILALAKSPLL 321
+G G G+GV GPA+ + A R S+ ADA + TP I + P
Sbjct: 110 RGDRGDIGVGVSCGPAILNGNALDNASRRSSSHSNTPSPPADAPPSPTPYISSAMSEP-- 167
Query: 322 QGGALKAMLGVLSALVSADEA 384
L A++ LSA V +A
Sbjct: 168 TAAELAALIKALSATVDKLQA 188
>11_02_0151 +
8837444-8837876,8838173-8839434,8839517-8839885,
8839963-8840223,8840230-8840442,8840602-8840967,
8841402-8841667,8842087-8842197,8842288-8842317,
8842444-8842465
Length = 1110
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/49 (36%), Positives = 21/49 (42%)
Frame = +3
Query: 312 AATPRRRSQSNVGRPECAGVGRRGGLFAPRAACLVGDACASLARAQRYR 458
A RRRS+ N GR E G P G+ACA R +R R
Sbjct: 565 AMVTRRRSKRNAGRAEPESDTTTSGP-QPTDTTTSGEACAKKKRGKRSR 612
>10_08_0222 - 15983756-15984313
Length = 185
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 148 EQGANGGAGLGVRAGPALRADGSGAGA 228
+ G GG G G ++GP GSG+G+
Sbjct: 151 QAGGQGGGGGGGQSGPGGSGSGSGSGS 177
>10_08_0062 + 14586613-14586966
Length = 117
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 157 ANGGAGLGVRAGPALRADGSGAGAV 231
A GG G + A PA R DG G G +
Sbjct: 88 AEGGDGGAMEAAPAARRDGLGGGCM 112
>07_03_1071 + 23753883-23754752
Length = 289
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 231 PPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSN 344
P V +PP + R +N R +Q AAT SQS+
Sbjct: 100 PIVVKLPPEEEEQQQRKGGKNKRKQQAAATSATSSQSS 137
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 219 RWCGPPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNVGRP 356
R C P C PPP G A S QV PRR + P
Sbjct: 657 RSCHPSPCD-PPPANGDASSSTGGRASCGQVCGAPRRECKHTCTAP 701
>06_01_0690 + 5033943-5034740
Length = 265
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 148 EQGANGGAGLGVRAGPALRADGSGAGA 228
+ G GG G G ++GP GSG+G+
Sbjct: 230 QAGGQGGGGGGGQSGPGGSGSGSGSGS 256
>03_05_0198 + 21890523-21891002
Length = 159
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 154 GANGGAGLGVRAGPALRADGSGAGAVRLSALS 249
G +GG G G PA + G G G R+ A S
Sbjct: 63 GGDGGRGSGSAPVPARQWSGGGGGGARIRASS 94
>03_02_0765 + 11000724-11002496
Length = 590
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 154 GANGGAGLGVRAGPALRADGSGAGAV 231
GA GG GLG AG L G G V
Sbjct: 157 GAGGGGGLGGGAGGGLGGGAGGGGGV 182
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -3
Query: 448 CALASDAQASPTRQAARGANSPPRRPTPAHSGRPTLL*ERRLGVAATWRARVFWA*ERSA 269
C A + +A+P Q A N+PP P+ +G P +R + A R R + A
Sbjct: 713 CPAADNDRAAPAAQEA--TNTPPPPAAPSANGSPPQEPPKRAPLTARERLRAARVLGKYA 770
Query: 268 RPR*GGGTAQTG 233
P GG++ G
Sbjct: 771 EP---GGSSPKG 779
>02_02_0081 -
6608901-6609680,6610380-6610808,6610893-6610994,
6611114-6611429,6611624-6611806,6611909-6612030,
6612181-6612251,6612732-6612921
Length = 730
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = +3
Query: 231 PPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNV---GRPECAGVGRR-GGLFAP 398
P C V H+G+A++ A A P++ SQS++ G P G ++ +P
Sbjct: 144 PDYCTVHVIHKGKAIQVKAAKAPAPFTTLPPKQYSQSSIESDGYPRSRGDWKKISNQSSP 203
Query: 399 RAACLVGDACASLARAQRYRTP 464
+A D + A+A P
Sbjct: 204 KANRPSVDRLSGFAKAPTRERP 225
>01_05_0490 + 22672241-22674679
Length = 812
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -3
Query: 439 ASDAQASP--TRQAARGANSPPRRPTP 365
+SDA ASP T + A +PPRRP P
Sbjct: 583 SSDASASPDSTVRTTNPAPAPPRRPPP 609
>01_05_0471 +
22535477-22535609,22535714-22535808,22535929-22536050,
22536165-22536702,22536774-22538105
Length = 739
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +3
Query: 195 CTARRRLWRWCGPPVCAVPPPHRGRALR-SHAQNTRARQVAATPRRRSQSNVGRPECAGV 371
CT RR R P + V P R HA R AA +Q NVG P G
Sbjct: 676 CTEMRRRDR---PDLATVILPELNRLRNLGHAYEARMSAAAADAAAHAQDNVGSPTVVGA 732
Query: 372 GRR 380
R
Sbjct: 733 SWR 735
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,782,667
Number of Sequences: 37544
Number of extensions: 367841
Number of successful extensions: 2559
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 2182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -