Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021907
(570 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050341-1|AAH50341.1| 1230|Homo sapiens cullin-associated and n... 68 3e-11
BC026220-1|AAH26220.1| 1159|Homo sapiens CAND1 protein protein. 68 3e-11
AK027404-1|BAB55090.1| 908|Homo sapiens protein ( Homo sapiens ... 68 3e-11
AF157326-1|AAF67492.1| 1230|Homo sapiens TIP120 protein protein. 68 3e-11
AB020636-1|BAA74852.2| 1277|Homo sapiens KIAA0829 protein protein. 68 3e-11
AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein. 59 9e-09
BC004232-1|AAH04232.1| 560|Homo sapiens CAND1 protein protein. 57 5e-08
AK024971-1|BAB15046.1| 196|Homo sapiens protein ( Homo sapiens ... 33 0.71
BC015733-1|AAH15733.1| 660|Homo sapiens CXXC1 protein protein. 31 2.2
BC014940-1|AAH14940.1| 656|Homo sapiens CXXC finger 1 (PHD doma... 31 2.2
AL662844-14|CAM25638.1| 216|Homo sapiens coiled-coil alpha-heli... 31 2.2
AF149758-1|AAF37799.1| 656|Homo sapiens CpG binding protein pro... 31 2.2
AB031069-1|BAA96307.1| 656|Homo sapiens protein containing CXXC... 31 2.2
BX640998-1|CAE46001.1| 364|Homo sapiens hypothetical protein pr... 31 2.9
BX640969-1|CAE45984.1| 364|Homo sapiens hypothetical protein pr... 31 2.9
BX640785-1|CAE45875.1| 364|Homo sapiens hypothetical protein pr... 31 2.9
BC011679-1|AAH11679.2| 364|Homo sapiens chromosome 22 open read... 31 2.9
AK024778-1|BAB14998.1| 303|Homo sapiens protein ( Homo sapiens ... 31 2.9
AB209883-1|BAD93120.1| 523|Homo sapiens CpG binding protein var... 31 2.9
AK125756-1|BAC86276.1| 290|Homo sapiens protein ( Homo sapiens ... 30 5.0
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 5.0
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 5.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 5.0
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 5.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 5.0
AL354880-1|CAI18904.1| 173|Homo sapiens SAM domain containing 1... 30 6.6
AL034350-1|CAI23090.1| 173|Homo sapiens SAM domain containing 1... 30 6.6
AL832641-1|CAD90000.1| 408|Homo sapiens hypothetical protein pr... 29 8.7
AK131473-1|BAD18618.1| 388|Homo sapiens protein ( Homo sapiens ... 29 8.7
>BC050341-1|AAH50341.1| 1230|Homo sapiens cullin-associated and
neddylation-dissociated 1 protein.
Length = 1230
Score = 67.7 bits (158), Expect = 3e-11
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
IDL P+L + VPIL SFLRKNQRA +NYS +++ ++ VL E+P L+
Sbjct: 642 IDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLI 701
Query: 182 CEQDLHCAQTALALVRSACLRCPAA 256
E D+H +Q A++ + + P++
Sbjct: 702 SESDMHVSQMAISFLTTLAKVYPSS 726
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
+++ L +SPLLQGGAL AML ALV +LL +L PV + A H
Sbjct: 737 ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV--YSQSTALTH-- 792
Query: 469 XQAFHSLSKCVAAGWWRGXPEAGEAVRG 552
Q+++S++KCVAA R P+ G AV G
Sbjct: 793 KQSYYSIAKCVAA-LTRACPKEGPAVVG 819
>BC026220-1|AAH26220.1| 1159|Homo sapiens CAND1 protein protein.
Length = 1159
Score = 67.7 bits (158), Expect = 3e-11
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
IDL P+L + VPIL SFLRKNQRA +NYS +++ ++ VL E+P L+
Sbjct: 571 IDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLI 630
Query: 182 CEQDLHCAQTALALVRSACLRCPAA 256
E D+H +Q A++ + + P++
Sbjct: 631 SESDMHVSQMAISFLTTLAKVYPSS 655
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
+++ L +SPLLQGGAL AML ALV +LL +L PV + A H
Sbjct: 666 ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV--YSQSTALTH-- 721
Query: 469 XQAFHSLSKCVAAGWWRGXPEAGEAVRG 552
Q+++S++KCVAA R P+ G AV G
Sbjct: 722 KQSYYSIAKCVAA-LTRACPKEGPAVVG 748
>AK027404-1|BAB55090.1| 908|Homo sapiens protein ( Homo sapiens
cDNA FLJ14498 fis, clone NT2RM1000055, highly similar to
Rattus norvegicus mRNA for TIP120. ).
Length = 908
Score = 67.7 bits (158), Expect = 3e-11
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
IDL P+L + VPIL SFLRKNQRA +NYS +++ ++ VL E+P L+
Sbjct: 320 IDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLI 379
Query: 182 CEQDLHCAQTALALVRSACLRCPAA 256
E D+H +Q A++ + + P++
Sbjct: 380 SESDMHVSQMAISFLTTLAKVYPSS 404
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
+++ L +SPLLQGGAL AML ALV +LL +L PV + A H
Sbjct: 415 ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV--YSQSTALTH-- 470
Query: 469 XQAFHSLSKCVAAGWWRGXPEAGEAVRG 552
Q+++S++KCVAA R P+ G AV G
Sbjct: 471 KQSYYSIAKCVAA-LTRACPKEGPAVVG 497
>AF157326-1|AAF67492.1| 1230|Homo sapiens TIP120 protein protein.
Length = 1230
Score = 67.7 bits (158), Expect = 3e-11
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
IDL P+L + VPIL SFLRKNQRA +NYS +++ ++ VL E+P L+
Sbjct: 642 IDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLI 701
Query: 182 CEQDLHCAQTALALVRSACLRCPAA 256
E D+H +Q A++ + + P++
Sbjct: 702 SESDMHVSQMAISFLTTLAKVYPSS 726
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
+++ L +SPLLQGGAL AML ALV +LL +L PV + A H
Sbjct: 737 ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV--YSQSTALTH-- 792
Query: 469 XQAFHSLSKCVAAGWWRGXPEAGEAVRG 552
Q+++S++KCVAA R P+ G AV G
Sbjct: 793 KQSYYSIAKCVAA-LTRACPKEGPAVVG 819
>AB020636-1|BAA74852.2| 1277|Homo sapiens KIAA0829 protein protein.
Length = 1277
Score = 67.7 bits (158), Expect = 3e-11
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
IDL P+L + VPIL SFLRKNQRA +NYS +++ ++ VL E+P L+
Sbjct: 689 IDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLI 748
Query: 182 CEQDLHCAQTALALVRSACLRCPAA 256
E D+H +Q A++ + + P++
Sbjct: 749 SESDMHVSQMAISFLTTLAKVYPSS 773
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
+++ L +SPLLQGGAL AML ALV +LL +L PV + A H
Sbjct: 784 ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV--YSQSTALTH-- 839
Query: 469 XQAFHSLSKCVAAGWWRGXPEAGEAVRG 552
Q+++S++KCVAA R P+ G AV G
Sbjct: 840 KQSYYSIAKCVAA-LTRACPKEGPAVVG 866
>AB014567-1|BAA31642.1| 1111|Homo sapiens KIAA0667 protein protein.
Length = 1111
Score = 59.3 bits (137), Expect = 9e-09
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 2 IDLTPILSDAVPILGSFLRKNQRAXXXXXXXXXXXXXQNYSHAISIELLSKVLMEVPALV 181
+DL PIL++A+ IL SFLRKNQRA Q+ ++ + VL E+PALV
Sbjct: 543 LDLQPILAEALHILASFLRKNQRALRLATLAALDALAQSQGLSLPPSAVQAVLAELPALV 602
Query: 182 CEQDLHCAQTALALVRSACLRCPAA 256
E D+H AQ A+ + + PA+
Sbjct: 603 NESDMHVAQLAVDFLATVTQAQPAS 627
Score = 48.0 bits (109), Expect = 2e-05
Identities = 29/73 (39%), Positives = 37/73 (50%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
++L L +SPLL G L A G L ALV +L++LL PV H
Sbjct: 638 ELLRLLRSPLLPAGVLAAAEGFLQALVGTRPPCVDYAKLISLLTAPVYEQAVDGGPGLH- 696
Query: 469 XQAFHSLSKCVAA 507
Q FHSL++CVAA
Sbjct: 697 KQVFHSLARCVAA 709
>BC004232-1|AAH04232.1| 560|Homo sapiens CAND1 protein protein.
Length = 560
Score = 56.8 bits (131), Expect = 5e-08
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +1
Query: 289 KILALAKSPLLQGGALKAMLGVLSALVSADEAGCSRRELLALLVMPVRRLQEHNATAHHX 468
+++ L +SPLLQGGAL AML ALV +LL +L PV + A H
Sbjct: 67 ELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPV--YSQSTALTH-- 122
Query: 469 XQAFHSLSKCVAAGWWRGXPEAGEAVRG 552
Q+++S++KCVAA R P+ G AV G
Sbjct: 123 KQSYYSIAKCVAA-LTRACPKEGPAVVG 149
Score = 35.9 bits (79), Expect = 0.10
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 113 QNYSHAISIELLSKVLMEVPALVCEQDLHCAQTALALVRSACLRCPAA 256
+NYS +++ ++ VL E+P L+ E D+H +Q A++ + + P++
Sbjct: 9 KNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSS 56
>AK024971-1|BAB15046.1| 196|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21318 fis, clone COL02295. ).
Length = 196
Score = 33.1 bits (72), Expect = 0.71
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 154 GANGGAGLGVRAGPALRADGSGAGAVRLSALSRRLTADAR 273
GA GAG GV AG DGS + A +S R+TA+ R
Sbjct: 43 GAGAGAGAGVVAGVGTAVDGSSSEASLSLTVSWRVTAEKR 82
>BC015733-1|AAH15733.1| 660|Homo sapiens CXXC1 protein protein.
Length = 660
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 444 LLQATHRHHQQGKQLAARTARLVGRHQ---RTQDAQHC 340
L+ +HHQQ +Q R+AR+ G + RT+D HC
Sbjct: 147 LVATPSQHHQQQQQQIKRSARMCGECEACRRTEDCGHC 184
>BC014940-1|AAH14940.1| 656|Homo sapiens CXXC finger 1 (PHD domain)
protein.
Length = 656
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 444 LLQATHRHHQQGKQLAARTARLVGRHQ---RTQDAQHC 340
L+ +HHQQ +Q R+AR+ G + RT+D HC
Sbjct: 147 LVATPSQHHQQQQQQIKRSARMCGECEACRRTEDCGHC 184
>AL662844-14|CAM25638.1| 216|Homo sapiens coiled-coil alpha-helical
rod protein 1 protein.
Length = 216
Score = 31.5 bits (68), Expect = 2.2
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 207 RRLWRWCGPPVCAVPP-PHRGRALRSHAQNTRARQVAATPR 326
R LWRW P+ VPP R+ R H +N R R+V A PR
Sbjct: 40 RELWRWRSRPLHCVPPFSPLARSSRDH-RNLR-RRVEALPR 78
>AF149758-1|AAF37799.1| 656|Homo sapiens CpG binding protein
protein.
Length = 656
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 444 LLQATHRHHQQGKQLAARTARLVGRHQ---RTQDAQHC 340
L+ +HHQQ +Q R+AR+ G + RT+D HC
Sbjct: 147 LVATPSQHHQQQQQQIKRSARMCGECEACRRTEDCGHC 184
>AB031069-1|BAA96307.1| 656|Homo sapiens protein containing CXXC
domain 1 protein.
Length = 656
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 444 LLQATHRHHQQGKQLAARTARLVGRHQ---RTQDAQHC 340
L+ +HHQQ +Q R+AR+ G + RT+D HC
Sbjct: 147 LVATPSQHHQQQQQQIKRSARMCGECEACRRTEDCGHC 184
>BX640998-1|CAE46001.1| 364|Homo sapiens hypothetical protein
protein.
Length = 364
Score = 31.1 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 433 DAQASPTRQAARGANSPPRRPTPAHSGRP 347
+A +P + + AN P +RP PAH G P
Sbjct: 294 EAAPTPVPRLSESANPPAQRPDPAHPGGP 322
>BX640969-1|CAE45984.1| 364|Homo sapiens hypothetical protein
protein.
Length = 364
Score = 31.1 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 433 DAQASPTRQAARGANSPPRRPTPAHSGRP 347
+A +P + + AN P +RP PAH G P
Sbjct: 294 EAAPTPVPRLSESANPPAQRPDPAHPGGP 322
>BX640785-1|CAE45875.1| 364|Homo sapiens hypothetical protein
protein.
Length = 364
Score = 31.1 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 433 DAQASPTRQAARGANSPPRRPTPAHSGRP 347
+A +P + + AN P +RP PAH G P
Sbjct: 294 EAAPTPVPRLSESANPPAQRPDPAHPGGP 322
>BC011679-1|AAH11679.2| 364|Homo sapiens chromosome 22 open reading
frame 29 protein.
Length = 364
Score = 31.1 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 433 DAQASPTRQAARGANSPPRRPTPAHSGRP 347
+A +P + + AN P +RP PAH G P
Sbjct: 294 EAAPTPVPRLSESANPPAQRPDPAHPGGP 322
>AK024778-1|BAB14998.1| 303|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21125 fis, clone CAS06077. ).
Length = 303
Score = 31.1 bits (67), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 433 DAQASPTRQAARGANSPPRRPTPAHSGRP 347
+A +P + + AN P +RP PAH G P
Sbjct: 233 EAAPTPVPRLSESANPPAQRPDPAHPGGP 261
>AB209883-1|BAD93120.1| 523|Homo sapiens CpG binding protein
variant protein.
Length = 523
Score = 31.1 bits (67), Expect = 2.9
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -1
Query: 456 GSVV-LLQATHRHHQQGKQLAARTARLVGRHQ---RTQDAQHC 340
GS++ +L +HHQQ +Q R+AR+ G + RT+D HC
Sbjct: 9 GSMISVLGPLLQHHQQQQQQIKRSARMCGECEACRRTEDCGHC 51
>AK125756-1|BAC86276.1| 290|Homo sapiens protein ( Homo sapiens
cDNA FLJ43768 fis, clone TESTI2049422. ).
Length = 290
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 448 CALASDAQASPTRQAARGANSPPRRPTPAHSGRPTLL 338
C ASP R+ G PP PTP+ RP LL
Sbjct: 210 CQAPGPRLASPPRRKQTGLWLPPSEPTPSLFSRPELL 246
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 422 ITNKASSSRREQPASSADTSALRTPNIALRAPPWSSGDLASAS 294
+T KA SRR + ASS+ + RTP R+P SS + A S
Sbjct: 1697 LTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 1739
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 422 ITNKASSSRREQPASSADTSALRTPNIALRAPPWSSGDLASAS 294
+T KA SRR + ASS+ + RTP R+P SS + A S
Sbjct: 729 LTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 771
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 422 ITNKASSSRREQPASSADTSALRTPNIALRAPPWSSGDLASAS 294
+T KA SRR + ASS+ + RTP R+P SS + A S
Sbjct: 1697 LTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 1739
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 422 ITNKASSSRREQPASSADTSALRTPNIALRAPPWSSGDLASAS 294
+T KA SRR + ASS+ + RTP R+P SS + A S
Sbjct: 220 LTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 262
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 422 ITNKASSSRREQPASSADTSALRTPNIALRAPPWSSGDLASAS 294
+T KA SRR + ASS+ + RTP R+P SS + A S
Sbjct: 1745 LTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKS 1787
>AL354880-1|CAI18904.1| 173|Homo sapiens SAM domain containing 1
protein.
Length = 173
Score = 29.9 bits (64), Expect = 6.6
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 228 GPPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNVGRPE 359
GPP AVP RG AQ TR T RS+ V P+
Sbjct: 84 GPPADAVPTGRRGEPCGGPAQGTRGDSRGHTTAPRSRELVSYPK 127
>AL034350-1|CAI23090.1| 173|Homo sapiens SAM domain containing 1
protein.
Length = 173
Score = 29.9 bits (64), Expect = 6.6
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 228 GPPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNVGRPE 359
GPP AVP RG AQ TR T RS+ V P+
Sbjct: 84 GPPADAVPTGRRGEPCGGPAQGTRGDSRGHTTAPRSRELVSYPK 127
>AL832641-1|CAD90000.1| 408|Homo sapiens hypothetical protein
protein.
Length = 408
Score = 29.5 bits (63), Expect = 8.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 231 PPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQSNVGRPECAG 368
P VC PP GRAL + +RA + P+R + + GR AG
Sbjct: 15 PFVCPSPPFRLGRALITGWGQSRAPRSDRIPKREREGSEGRRTPAG 60
>AK131473-1|BAD18618.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ16641 fis, clone TESTI4028958. ).
Length = 388
Score = 29.5 bits (63), Expect = 8.7
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +3
Query: 228 GPPVCAVPPPHRGRALRSHAQNTRARQVAATPRRRSQ 338
G P+ P P RG A S A TR R A RRRSQ
Sbjct: 353 GVPILPQPHPPRGGA--SSANETRQRLAAILRRRRSQ 387
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,076,754
Number of Sequences: 237096
Number of extensions: 1717172
Number of successful extensions: 6355
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6331
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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