Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021907
(570 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.8
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 22 3.7
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 22 3.7
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 22 3.7
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 6.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 6.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 6.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 8.6
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P +SDA+P+LGS+
Sbjct: 248 PQVSDAIPLLGSY 260
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P +SDA+P+LGS+
Sbjct: 248 PQVSDAIPLLGSY 260
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P +SDA+P+LGS+
Sbjct: 248 PQVSDAIPLLGSY 260
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P +SDA+P+LGS+
Sbjct: 316 PQVSDAIPLLGSY 328
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P SDAVP++GS+
Sbjct: 248 PTTSDAVPLIGSY 260
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P SDAVP++GS+
Sbjct: 248 PTTSDAVPLIGSY 260
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P SDAVP++GS+
Sbjct: 248 PTTSDAVPLIGSY 260
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P SDAVP++GS+
Sbjct: 316 PTTSDAVPLIGSY 328
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 2.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 416 NKASSSRREQPASSADTSALRTPNIAL 336
NKAS +RE+ ++ + A +T I L
Sbjct: 599 NKASKKKREKSSAKKERKATKTLAIVL 625
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -2
Query: 437 KRRTGITNKASSSRREQPASSADTSALRTPNI 342
KR G TNK R + S RTP++
Sbjct: 542 KRNGGETNKQELKRLKSTVSLLPLPLARTPSV 573
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 14 PILSDAVPILGSF 52
P SDAVP+LG++
Sbjct: 285 PATSDAVPLLGTY 297
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 22.2 bits (45), Expect = 3.7
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 264 GRALRSHAQNTRARQVAATPRRRSQSNVGRPECAGVGRRGGLFAP---RAAC 410
GR+ S Q A RR+ + +G C VGRR AP R AC
Sbjct: 29 GRSRVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGAC 80
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 435 ATHRHHQQGKQLAA 394
A H HHQQ + +AA
Sbjct: 96 AAHHHHQQQQAVAA 109
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 22.2 bits (45), Expect = 3.7
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 264 GRALRSHAQNTRARQVAATPRRRSQSNVGRPECAGVGRRGGLFAP---RAAC 410
GR+ S Q A RR+ + +G C VGRR AP R AC
Sbjct: 29 GRSRVSDEQLNMALSDQRYLRRQLKCALGEAPCDPVGRRLKSLAPLVLRGAC 80
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.4 bits (43), Expect = 6.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 455 VALCSCKRRTGITNKASSSRREQPASSADTSALRTPNIALRAP 327
+ C CKRRT + S Q A D R+P+ +++ P
Sbjct: 77 ICKCFCKRRTNTLRRGSDG--SQLAMRND----RSPSYSMQVP 113
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 6.5
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 455 VALCSCKRRTGITNKASSSRREQPASSADTSALRTPNIALRAP 327
+ C CKRRT + S Q A D R+P+ +++ P
Sbjct: 525 ICKCFCKRRTNTLRRGSDG--SQLAMRND----RSPSYSMQVP 561
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -2
Query: 560 RRKPRTASPASGXPLHHPAATH 495
RR R S G P P TH
Sbjct: 583 RRPQRACSTTGGVPSKSPTLTH 604
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.0 bits (42), Expect = 8.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = -1
Query: 456 GSVVLLQATHRHHQQGKQLAARTARLVGRHQR 361
G V L H HH + + L RHQ+
Sbjct: 271 GGVYHLDNHHVHHANHHAILGHSGFLCERHQK 302
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,949
Number of Sequences: 438
Number of extensions: 2867
Number of successful extensions: 21
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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