Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021906X
(528 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 155 3e-38
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 155 3e-38
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 153 1e-37
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 153 1e-37
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 8e-37
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 121 4e-28
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 77 7e-15
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 77 9e-15
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 77 9e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 76 2e-14
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 6e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 6e-14
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 74 6e-14
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 4e-13
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 69 3e-12
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 66 1e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 52 4e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 9e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 43 1e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 38 0.004
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.19
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.78
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.8
SB_28802| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00055) 29 1.8
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 4.1
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.5
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 27 7.2
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 27 9.6
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 9.6
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 155 bits (375), Expect = 3e-38
Identities = 75/93 (80%), Positives = 76/93 (81%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREEYP
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 150 bits (363), Expect = 8e-37
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 228 PRAILVDLEP 257
PRAILVDLEP
Sbjct: 61 PRAILVDLEP 70
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 155 bits (375), Expect = 3e-38
Identities = 69/79 (87%), Positives = 73/79 (92%)
Frame = +3
Query: 21 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 200
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 201 NEASGGKYVPRAILVDLEP 257
NEA+GGKYVPRA+LVDLEP
Sbjct: 265 NEATGGKYVPRAVLVDLEP 283
Score = 155 bits (375), Expect = 3e-38
Identities = 75/93 (80%), Positives = 76/93 (81%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC
Sbjct: 281 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 340
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREEYP
Sbjct: 341 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 373
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 153 bits (370), Expect = 1e-37
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC
Sbjct: 13 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 72
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DC+QGFQLTHS L+IREEYP
Sbjct: 73 DCIQGFQLTHSLGGGTGSGMVTLLILKIREEYP 105
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 216 GKYVPRAILVDLEP 257
GKYVPRA+LVDLEP
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 153 bits (370), Expect = 1e-37
Identities = 73/93 (78%), Positives = 76/93 (81%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAESC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DC+QGFQLTHS G +IREEYP
Sbjct: 128 DCIQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 145 bits (352), Expect = 2e-35
Identities = 62/70 (88%), Positives = 68/70 (97%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 228 PRAILVDLEP 257
PR++L+DLEP
Sbjct: 61 PRSVLIDLEP 70
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 150 bits (363), Expect = 8e-37
Identities = 66/70 (94%), Positives = 68/70 (97%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 228 PRAILVDLEP 257
PRAILVDLEP
Sbjct: 61 PRAILVDLEP 70
Score = 50.4 bits (115), Expect = 9e-07
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVF 322
L GTMDSVRSGPFGQ FRPDNFVF
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 121 bits (291), Expect = 4e-28
Identities = 56/93 (60%), Positives = 66/93 (70%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMD+VR GP G FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEAE+C
Sbjct: 24 LEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENC 83
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DC+QG QL + G +IREEYP
Sbjct: 84 DCMQGVQLIQALGGGTGSGLGTLILSKIREEYP 116
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 210 SGGKYVPRAILVDLEP 257
+GG+YVPR+ILVDLEP
Sbjct: 11 TGGRYVPRSILVDLEP 26
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 77.4 bits (182), Expect = 7e-15
Identities = 37/67 (55%), Positives = 45/67 (67%)
Frame = +2
Query: 326 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSXXRRHRFRYGHPPHL 505
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ HS G
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 506 QIREEYP 526
+IREEYP
Sbjct: 62 KIREEYP 68
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 77.0 bits (181), Expect = 9e-15
Identities = 34/66 (51%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 75 VDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLIFHS 140
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 508 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQG 567
Query: 443 FQLTHS 460
F + HS
Sbjct: 568 FLIFHS 573
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
Score = 64.9 bits (151), Expect = 4e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 225 VPRAILVDLEP 257
VPRA+ VDLEP
Sbjct: 495 VPRAVFVDLEP 505
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 77.0 bits (181), Expect = 9e-15
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQG
Sbjct: 660 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQG 719
Query: 443 FQLTHS 460
F + HS
Sbjct: 720 FLIFHS 725
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C LQG
Sbjct: 139 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 198
Query: 443 FQLTHS 460
F + HS
Sbjct: 199 FLIFHS 204
Score = 65.3 bits (152), Expect = 3e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 646 HVPRAVFVDLEP 657
Score = 64.9 bits (151), Expect = 4e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 225 VPRAILVDLEP 257
VPRA+ VDLEP
Sbjct: 574 VPRAVFVDLEP 584
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 225 VPRAILVDLEP 257
VPRA+ VDLEP
Sbjct: 126 VPRAVFVDLEP 136
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +2
Query: 266 DSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 445
D VR+G + Q F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 446 QLTHS 460
+ HS
Sbjct: 73 LIFHS 77
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E++D+VLD +RK A+ C LQG
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADGCTGLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLIFHS 140
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ DLEP
Sbjct: 61 HVPRAVFCDLEP 72
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 74 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQG 133
Query: 443 FQLTHS 460
F + HS
Sbjct: 134 FLIFHS 139
Score = 64.9 bits (151), Expect = 4e-11
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 225 VPRAILVDLEP 257
VPRA+ VDLEP
Sbjct: 61 VPRAVFVDLEP 71
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 879 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQCTGLQG 938
Query: 443 FQLTHS 460
F + HS
Sbjct: 939 FLIFHS 944
Score = 73.7 bits (173), Expect = 8e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+ C LQG
Sbjct: 446 IDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADGCTGLQG 505
Query: 443 FQLTHS 460
F + HS
Sbjct: 506 FLIFHS 511
Score = 63.7 bits (148), Expect = 9e-11
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 225 VPRAILVDLEP 257
VPRA+ VDLEP
Sbjct: 433 VPRAVFVDLEP 443
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 225 VPRAILVDLEP 257
VPRA+ DLEP
Sbjct: 866 VPRAVFADLEP 876
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 74.1 bits (174), Expect = 6e-14
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L +D +R+G + Q F P+ + G+ A NN+A+GHYT G + +D+VLD +RK A+ C
Sbjct: 488 LEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQC 547
Query: 428 DCLQGFQLTHS 460
LQGF + HS
Sbjct: 548 SGLQGFLVFHS 558
Score = 73.3 bits (172), Expect = 1e-13
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C LQG
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQG 119
Query: 443 FQLTHS 460
F + HS
Sbjct: 120 FLIFHS 125
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 225 VPRAILVDLEPA 260
VPRA+ VDLEP+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 93 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDLEP 257
+G WE+ EHGI P G D + + N +++E GK+VPRA+ DLEP
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 74.1 bits (174), Expect = 6e-14
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +2
Query: 272 VRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 451
VR+G + Q F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 452 THS 460
HS
Sbjct: 63 FHS 65
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 74.1 bits (174), Expect = 6e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E++D VLD RK A+ C LQG
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQCTGLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLIFHS 140
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 71.3 bits (167), Expect = 4e-13
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + Q F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQG
Sbjct: 40 IDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQG 99
Query: 443 FQLTHS 460
F + HS
Sbjct: 100 FLIFHS 105
Score = 35.5 bits (78), Expect = 0.027
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 180 ERINVYYNEASGGKYVPRAILVDLEP 257
+ N ++ E GK+VPRA+ VDLEP
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 221
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 222 YVPRAILVDLEPA 260
+VPRA+ VDLEP+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + + P+ + G+ A NN+A+GHYT G E+V+ V+D +RK + C LQG
Sbjct: 986 IDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQCSGLQG 1045
Query: 443 FQLTHS 460
F + HS
Sbjct: 1046 FLIFHS 1051
Score = 37.1 bits (82), Expect = 0.009
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 201 NEASGGKYVPRAILVDLEP 257
+EA+ GKYVPRA+LVDLEP
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.5 bits (160), Expect = 3e-12
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = +2
Query: 272 VRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 451
+R+G + Q F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 452 THS 460
HS
Sbjct: 63 FHS 65
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEPAPWTLS 275
+VPRA+ VDLEP LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2
Query: 305 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHS 460
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF + HS
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHS 130
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 272 VRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 412
VR+G + Q F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 51.6 bits (118), Expect = 4e-07
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 272 VRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 412
VR G + F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 305 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 445
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 57 IVHIQAGQCGNQIGAKFWEIISDE 128
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 215
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 216 GKY 224
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 105 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 206
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +2
Query: 281 GPFGQXFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRKEAESCDCLQGF 445
G GQ R N + G+ G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 59 GVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGT 117
Query: 446 QLTHS 460
+ HS
Sbjct: 118 IVMHS 122
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 404 VRKEAESCDCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
+RKEAE CD +QGFQL HS G ++EEYP
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYP 41
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -3
Query: 442 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEXLSERSRADRVH 263
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 262 GAG 254
G
Sbjct: 264 RCG 266
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.78
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 423 DSASFRTTSKTESTSSAPSV*CPLAQL 343
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 5.5
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 360 CPLAQLLPAPDCPKTKLSGRXICP 289
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_28802| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00055)
Length = 411
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 63 HIQAGQCGNQIGAKFWEI-ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAI 239
H+ Q K W I +SD + Y D ++ +VY + K A+
Sbjct: 184 HVYTNQPQCITKTKVWNIGLSDHLPVCVVRRYKKKQDHAADKNHVYISYRDCKKLDEEAL 243
Query: 240 LVDLEPAPWTL 272
L DL+ APW++
Sbjct: 244 LKDLDEAPWSV 254
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 218
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 219 KYVPRAILVDLEPAPWTLS 275
Y PR +L DL+ + LS
Sbjct: 83 -YTPRLLLYDLKGSLRNLS 100
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +3
Query: 117 ISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 257
+ D G GD L L + +Y E G + V R + LEP
Sbjct: 792 VDDVRGCFQEALKEGDGQLTLNSLIEHYKELEGSEKVARELFAMLEP 838
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 257 GTMDSVRSGPFGQXFRPDNFVFGQSGAGNNW 349
G ++++ GP F + SG GNNW
Sbjct: 85 GVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 203 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPEL 102
I VY DA++LQV P+ G+D + V D EL
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 336 APDCPKTKLSGRXICPKGPERTES 265
A DCP ++ +GR +CP P +S
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQS 161
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGID---PTGAYHGDSDLQLERINVYYNEASGG 218
+RE++ +Q G N +G +W I D P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDAASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 219 KYVPRAILVDLEPAPWTLS 275
Y PR +L DL+ + LS
Sbjct: 83 -YTPRLLLYDLKGSLRNLS 100
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,977,863
Number of Sequences: 59808
Number of extensions: 299232
Number of successful extensions: 903
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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