Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021906X
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 152 2e-37
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 151 2e-37
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 151 2e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 150 7e-37
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 148 2e-36
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 148 2e-36
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 109 1e-24
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 109 1e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 81 4e-16
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 75 3e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 75 3e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 75 3e-14
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 75 3e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 74 7e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 73 1e-13
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 73 1e-13
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 71 7e-13
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 71 7e-13
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 71 7e-13
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 71 7e-13
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 66 2e-11
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 64 6e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 64 6e-11
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 27 6.3
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 27 6.3
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 152 bits (368), Expect = 2e-37
Identities = 73/93 (78%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAE C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREEYP
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 141 bits (341), Expect = 3e-34
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 228 PRAILVDLEP 257
PRA+LVDLEP
Sbjct: 61 PRAVLVDLEP 70
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 151 bits (367), Expect = 2e-37
Identities = 72/93 (77%), Positives = 76/93 (81%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVR+GPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+THS G +IREEYP
Sbjct: 128 DCLQGFQMTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 150 bits (363), Expect = 7e-37
Identities = 67/70 (95%), Positives = 69/70 (98%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 228 PRAILVDLEP 257
PRA LVDLEP
Sbjct: 61 PRACLVDLEP 70
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 151 bits (367), Expect = 2e-37
Identities = 72/93 (77%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKEAE C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREEYP
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 132 bits (320), Expect = 1e-31
Identities = 56/70 (80%), Positives = 65/70 (92%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 228 PRAILVDLEP 257
PRA+LVDLEP
Sbjct: 61 PRAVLVDLEP 70
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 150 bits (363), Expect = 7e-37
Identities = 71/93 (76%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKEAE C
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREE+P
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEFP 160
Score = 134 bits (323), Expect = 5e-32
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 228 PRAILVDLEP 257
PRA+LVDLEP
Sbjct: 61 PRAVLVDLEP 70
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 148 bits (359), Expect = 2e-36
Identities = 72/93 (77%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAES
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREEYP
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 138 bits (335), Expect = 2e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 228 PRAILVDLEP 257
PRA+LVDLEP
Sbjct: 61 PRAVLVDLEP 70
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 148 bits (359), Expect = 2e-36
Identities = 72/93 (77%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGPFGQ FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAES
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEST 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQLTHS G +IREEYP
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP 160
Score = 138 bits (335), Expect = 2e-33
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 228 PRAILVDLEP 257
PRA+LVDLEP
Sbjct: 61 PRAVLVDLEP 70
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 109 bits (262), Expect = 1e-24
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 228 PRAILVDLEP 257
PRAILVDL+P
Sbjct: 61 PRAILVDLDP 70
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +2
Query: 260 TMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQ 439
+++ VRS +G+ F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+EAE+ D L+
Sbjct: 72 SINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLE 131
Query: 440 GFQLTHSXXRRHRFRYGHPPHLQIREEY 523
GFQL HS G ++REEY
Sbjct: 132 GFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 109 bits (262), Expect = 1e-24
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 228 PRAILVDLEP 257
PRAILVDL+P
Sbjct: 61 PRAILVDLDP 70
Score = 92.7 bits (220), Expect = 1e-19
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +2
Query: 260 TMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQ 439
+++ VRS +G+ F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+EAE+ D L+
Sbjct: 72 SINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLE 131
Query: 440 GFQLTHSXXRRHRFRYGHPPHLQIREEY 523
GFQL HS G ++REEY
Sbjct: 132 GFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 81.4 bits (192), Expect = 4e-16
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G +G F PD + G+ A NN+A+GHYT G EL+D VLD +RK+ E+C+ LQG
Sbjct: 78 LDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQG 137
Query: 443 FQLTHS 460
F + HS
Sbjct: 138 FLVFHS 143
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 227
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 228 PRAILVDLEP 257
PRAI VDLEP
Sbjct: 66 PRAIYVDLEP 75
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 74.9 bits (176), Expect = 3e-14
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 443 FQLTHS 460
F + HS
Sbjct: 133 FFVFHS 138
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/70 (44%), Positives = 41/70 (58%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 74.9 bits (176), Expect = 3e-14
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 443 FQLTHS 460
F + HS
Sbjct: 133 FFVFHS 138
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 74.9 bits (176), Expect = 3e-14
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 443 FQLTHS 460
F + HS
Sbjct: 133 FFVFHS 138
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 74.9 bits (176), Expect = 3e-14
Identities = 30/66 (45%), Positives = 47/66 (71%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ A++C LQG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQG 132
Query: 443 FQLTHS 460
F + HS
Sbjct: 133 FFVFHS 138
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/70 (44%), Positives = 41/70 (58%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 74.5 bits (175), Expect = 4e-14
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + + F P+ + G+ A NN+A+GHYT G EL+D V+D VR+ E C LQG
Sbjct: 75 IDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLIFHS 140
Score = 70.5 bits (165), Expect = 7e-13
Identities = 36/72 (50%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 221
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 222 YVPRAILVDLEP 257
+VPRAI VDLEP
Sbjct: 61 HVPRAIFVDLEP 72
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 73.7 bits (173), Expect = 7e-14
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 42 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASG 215
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L + + N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 216 GKYVPRAILVDLEPAP 263
GK+VPRAI+VDLEP P
Sbjct: 64 GKHVPRAIMVDLEPTP 79
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/66 (43%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + F P+ + G+ A NN+A+GHYT G E++D V+D VR+ E+C LQG
Sbjct: 80 IDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQG 139
Query: 443 FQLTHS 460
F + HS
Sbjct: 140 FLVFHS 145
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 221
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 222 YVPRAILVDLEP 257
+VPR + VDLEP
Sbjct: 67 HVPRCLFVDLEP 78
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQG
Sbjct: 81 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 140
Query: 443 FQLTHS 460
F + HS
Sbjct: 141 FVIFHS 146
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ A++C LQG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQG 132
Query: 443 FQLTHS 460
F + HS
Sbjct: 133 FFVFHS 138
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 72.9 bits (171), Expect = 1e-13
Identities = 29/66 (43%), Positives = 46/66 (69%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ A++C LQG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQG 132
Query: 443 FQLTHS 460
F + HS
Sbjct: 133 FFVFHS 138
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 61 PRSIFVDLEP 70
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 71.7 bits (168), Expect = 3e-13
Identities = 28/66 (42%), Positives = 46/66 (69%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + + F P+ + G+ A NN+A+GHYT G E++D+ LD +R+ A +C+ LQG
Sbjct: 72 VDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQG 131
Query: 443 FQLTHS 460
F + HS
Sbjct: 132 FFVFHS 137
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 228 PRAILVDLEP 257
PR+I VDLEP
Sbjct: 60 PRSIFVDLEP 69
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 70.5 bits (165), Expect = 7e-13
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + F P+ + G+ A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLVFHS 140
Score = 67.7 bits (158), Expect = 5e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 222 YVPRAILVDLEP 257
+VPRA++VDLEP
Sbjct: 61 HVPRAVMVDLEP 72
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 70.5 bits (165), Expect = 7e-13
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + F P+ + G+ A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 74 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 133
Query: 443 FQLTHS 460
F + HS
Sbjct: 134 FLVFHS 139
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 224
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 225 VPRAILVDLEP 257
VPRA++VDLEP
Sbjct: 61 VPRAVMVDLEP 71
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 70.5 bits (165), Expect = 7e-13
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + F P+ + G+ A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLVFHS 140
Score = 67.7 bits (158), Expect = 5e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 222 YVPRAILVDLEP 257
+VPRA++VDLEP
Sbjct: 61 HVPRAVMVDLEP 72
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 70.5 bits (165), Expect = 7e-13
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D +R+G + F P+ + G+ A NN+A+GHYT G E++D LD +R+ A++C LQG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQG 134
Query: 443 FQLTHS 460
F + HS
Sbjct: 135 FLVFHS 140
Score = 67.7 bits (158), Expect = 5e-12
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 222 YVPRAILVDLEP 257
+VPRA++VDLEP
Sbjct: 61 HVPRAVMVDLEP 72
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQG
Sbjct: 53 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 112
Query: 443 FQLTHS 460
F + HS
Sbjct: 113 FVIFHS 118
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Frame = +3
Query: 126 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEP 257
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEP 50
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +3
Query: 57 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 236
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 237 ILVDLEP 257
+LVDLEP
Sbjct: 66 VLVDLEP 72
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 272 VRSGPFGQXFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 445
++S F F DN GAGNNWA G Y +G E+ + ++D++ +EAE+ + L G
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGI 137
Query: 446 QLTHS 460
THS
Sbjct: 138 LFTHS 142
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +3
Query: 57 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 236
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 237 ILVDLEP 257
+LVDLEP
Sbjct: 66 VLVDLEP 72
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 272 VRSGPFGQXFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 445
++S F F DN GAGNNWA G Y +G E+ + ++D++ +EAE+ + L G
Sbjct: 79 MQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGI 137
Query: 446 QLTHS 460
THS
Sbjct: 138 LFTHS 142
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 114 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 251
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 483 RNRCRRXCECVSWNPWRQSHDSASFRTTSKTESTSSAPS 367
R R R+ E +WN R S + S TTS T +SS S
Sbjct: 393 RYRRRQQLEDEAWNRLRNSSAAPSLLTTSVTADSSSRTS 431
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 483 RNRCRRXCECVSWNPWRQSHDSASFRTTSKTESTSSAPS 367
R R R+ E +WN R S + S TTS T +SS S
Sbjct: 393 RYRRRQQLEDEAWNRLRNSSAAPSLLTTSVTADSSSRTS 431
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 429 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCP 322
S A R + + S SS+PS CP LLP P CP
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLP-PVCP 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,956,030
Number of Sequences: 27780
Number of extensions: 213479
Number of successful extensions: 717
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -