Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021906X
(528 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 148 2e-36
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 148 2e-36
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 148 2e-36
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 148 3e-36
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 147 5e-36
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 147 5e-36
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 146 6e-36
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 146 1e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 144 3e-35
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 71 5e-13
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 71 5e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 71 5e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 71 5e-13
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 70 8e-13
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 70 8e-13
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 70 8e-13
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 70 8e-13
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 70 8e-13
At4g37190.1 68417.m05265 expressed protein 36 0.022
At5g24010.1 68418.m02821 protein kinase family protein contains ... 32 0.21
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.48
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 30 1.1
At4g34610.1 68417.m04916 homeodomain-containing protein similari... 29 2.6
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 4.5
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 4.5
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 5.9
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 7.8
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 27 7.8
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 7.8
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 148 bits (359), Expect = 2e-36
Identities = 70/93 (75%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 126 bits (305), Expect = 7e-30
Identities = 53/70 (75%), Positives = 63/70 (90%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 228 PRAILVDLEP 257
PRA+L+DLEP
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 148 bits (359), Expect = 2e-36
Identities = 70/93 (75%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDS+RSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 129 bits (312), Expect = 1e-30
Identities = 57/70 (81%), Positives = 63/70 (90%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 228 PRAILVDLEP 257
PRA+L+DLEP
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 148 bits (359), Expect = 2e-36
Identities = 70/93 (75%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVRSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 127 bits (306), Expect = 5e-30
Identities = 54/70 (77%), Positives = 64/70 (91%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 228 PRAILVDLEP 257
PRA+L+DLEP
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 148 bits (358), Expect = 3e-36
Identities = 69/93 (74%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDS+RSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 161
Score = 131 bits (317), Expect = 2e-31
Identities = 58/71 (81%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 224
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 225 VPRAILVDLEP 257
VPRA+L+DLEP
Sbjct: 61 VPRAVLMDLEP 71
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 147 bits (356), Expect = 5e-36
Identities = 69/93 (74%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 132 bits (319), Expect = 1e-31
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 228 PRAILVDLEP 257
PRA+L+DLEP
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 147 bits (356), Expect = 5e-36
Identities = 69/93 (74%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 132 bits (319), Expect = 1e-31
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 228 PRAILVDLEP 257
PRA+L+DLEP
Sbjct: 61 PRAVLMDLEP 70
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 146 bits (355), Expect = 6e-36
Identities = 68/93 (73%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 161
Score = 136 bits (328), Expect = 1e-32
Identities = 58/71 (81%), Positives = 67/71 (94%), Gaps = 1/71 (1%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 224
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 225 VPRAILVDLEP 257
VPRA+L+DLEP
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 146 bits (353), Expect = 1e-35
Identities = 68/93 (73%), Positives = 75/93 (80%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDSVR+GP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 133 bits (322), Expect = 6e-32
Identities = 57/70 (81%), Positives = 65/70 (92%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 228 PRAILVDLEP 257
PRAIL+DLEP
Sbjct: 61 PRAILMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 144 bits (349), Expect = 3e-35
Identities = 69/93 (74%), Positives = 74/93 (79%)
Frame = +2
Query: 248 LGAGTMDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 427
L GTMDS+RSGPFGQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 428 DCLQGFQLTHSXXRRHRFRYGHPPHLQIREEYP 526
DCLQGFQ+ HS G +IREEYP
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYP 160
Score = 132 bits (318), Expect = 2e-31
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 227
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 228 PRAILVDLEP 257
PRA+L+DLEP
Sbjct: 61 PRAVLMDLEP 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD LD VRK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
Score = 70.5 bits (165), Expect = 6e-13
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 221
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD LD VRK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
Score = 70.5 bits (165), Expect = 6e-13
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 221
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 230
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 231 RAILVDLEP 257
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCL 436
++ +++G + + +N GAGNNWA G Y +G + + ++D++ +EA+ D L
Sbjct: 74 INGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSL 132
Query: 437 QGFQLTHS 460
+GF L HS
Sbjct: 133 EGFVLCHS 140
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 70.9 bits (166), Expect = 5e-13
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +3
Query: 51 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 230
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 231 RAILVDLEP 257
RA+L+DLEP
Sbjct: 63 RALLIDLEP 71
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCL 436
++ +++G + + +N GAGNNWA G Y +G + + ++D++ +EA+ D L
Sbjct: 74 INGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSL 132
Query: 437 QGFQLTHS 460
+GF L HS
Sbjct: 133 EGFVLCHS 140
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.1 bits (164), Expect = 8e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
Score = 68.1 bits (159), Expect = 3e-12
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 70.1 bits (164), Expect = 8e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
Score = 68.1 bits (159), Expect = 3e-12
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 70.1 bits (164), Expect = 8e-13
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 221
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ +DLEP
Sbjct: 61 HVPRAVFLDLEP 72
Score = 69.3 bits (162), Expect = 1e-12
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 70.1 bits (164), Expect = 8e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 70.1 bits (164), Expect = 8e-13
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +2
Query: 263 MDSVRSGPFGQXFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 442
+D VR+G + Q F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C LQG
Sbjct: 75 IDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQG 134
Query: 443 F 445
F
Sbjct: 135 F 135
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 221
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 222 YVPRAILVDLEP 257
+VPRA+ VDLEP
Sbjct: 61 HVPRAVFVDLEP 72
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 35.5 bits (78), Expect = 0.022
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 48 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 215
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 216 GKYVPRAILVDLEPAPWTLSA 278
Y PR + V+L+ A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 32.3 bits (70), Expect = 0.21
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 492 CPYRNRCRRXCECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQL 343
C +N R E W P R+ S++ RTT +T S+S ++ A+L
Sbjct: 433 CRRKNNKTRSSESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAEL 482
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.1 bits (67), Expect = 0.48
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 380 LVDSVLDVVRKEAESCDCLQGFQLTHS 460
+++SV VVRKEAE+C+CLQ F ++ S
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGS 26
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Frame = -1
Query: 405 TTSKTESTSSAPSV*CPLAQLLPAPDCP-------KTKLSGRXICPKGPERTESMVPAP 250
TTS+T+ST S+P P L +P P TK S R P P E PAP
Sbjct: 281 TTSETDSTESSPKEDVPPPPPLTSPQTPSPTVSTFNTKSSLRSQPPPPPPSPEHKAPAP 339
>At4g34610.1 68417.m04916 homeodomain-containing protein similaritry
to homeotic protein BEL1, Arabidopsis thaliana,
PIR2:A57632
Length = 532
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = -3
Query: 439 LEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEXLSERSRADRVHG 260
+E I + F ND N E +T ++ +GPV A +DE E ++++ D HG
Sbjct: 377 VEEIYKEEFTENDS-NSSSE-NTPKMSEIGPVAA-----DDEDRAREFSQDQTKPDHGHG 429
Query: 259 AGSKSTRMARGTYL 218
G ++ M +G+++
Sbjct: 430 YGEETRGMVQGSHM 443
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -1
Query: 429 SHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRXICPKGPERTESMVPAP 250
S + S ++ ST S PS P + P P PK S + P P T P+P
Sbjct: 69 SAPAISISPSTPIPSTPSTPSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPTPKKSPSP 128
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -2
Query: 218 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 39
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 54 EIVHIQAGQCGNQIGAKFWEIISD 125
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 96 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 245
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 27.1 bits (57), Expect = 7.8
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -2
Query: 206 FIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL------TSLDMYDFPHF 45
F++V+ L Q V +GT GV+ + D+LP S D VA L + +YD H
Sbjct: 24 FLLVF-SILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATLLKSAKIRNTRIYDADHS 80
Query: 44 VL 39
VL
Sbjct: 81 VL 82
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 69 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 161
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,537,006
Number of Sequences: 28952
Number of extensions: 204791
Number of successful extensions: 662
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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