Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021905X
(393 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bomb... 73 2e-12
UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimu... 39 0.039
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 38 0.069
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 38 0.069
UniRef50_UPI000023F3F3 Cluster: hypothetical protein FG08939.1; ... 36 0.28
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 35 0.64
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 34 0.85
UniRef50_UPI000023F1B7 Cluster: hypothetical protein FG01632.1; ... 34 1.1
UniRef50_A0UZM9 Cluster: Fibronectin, type III precursor; n=1; C... 33 2.0
UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, wh... 33 2.0
UniRef50_Q8QN85 Cluster: EsV-1-204; n=1; Ectocarpus siliculosus ... 33 2.6
UniRef50_Q9VEE5 Cluster: CG33547-PA; n=6; Eumetazoa|Rep: CG33547... 33 2.6
UniRef50_A3MW94 Cluster: Putative uncharacterized protein precur... 33 2.6
UniRef50_P52958 Cluster: Cutinase transcription factor 1 alpha; ... 33 2.6
UniRef50_Q9NRN7 Cluster: L-aminoadipate-semialdehyde dehydrogena... 33 2.6
UniRef50_UPI0000EBE732 Cluster: PREDICTED: hypothetical protein;... 32 3.4
UniRef50_UPI000065E9C7 Cluster: KIAA2018 (KIAA2018), mRNA; n=1; ... 32 3.4
UniRef50_Q4S555 Cluster: Chromosome 6 SCAF14737, whole genome sh... 32 3.4
UniRef50_Q5AF61 Cluster: Potential fungal zinc cluster transcrip... 32 3.4
UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan nuc... 32 4.5
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 32 4.5
UniRef50_A5C2L0 Cluster: Putative uncharacterized protein; n=1; ... 32 4.5
UniRef50_UPI000023D8D8 Cluster: hypothetical protein FG08716.1; ... 31 7.9
UniRef50_Q98FN9 Cluster: Phosphonate monoester hydrolase; n=4; A... 31 7.9
UniRef50_A5ZRS3 Cluster: Putative uncharacterized protein; n=1; ... 31 7.9
UniRef50_A0YPI4 Cluster: Serine/threonine kinase; n=1; Lyngbya s... 31 7.9
UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8; Tymovir... 31 7.9
>UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bombyx
mori Macula-like latent virus|Rep: RNA-dependent RNA
polymerase - Bombyx mori Macula-like latent virus
Length = 1747
Score = 72.9 bits (171), Expect = 2e-12
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +2
Query: 50 NTIHRLYHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMT*TTNKVSLSLAS 208
+T+ HRDAITAPLVETAISNFRHKLQLYPYQVNSKL+ N++ + + S
Sbjct: 8 DTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLIP-LLNQLGIGVTS 59
Score = 67.7 bits (158), Expect = 7e-11
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +1
Query: 256 RDAITAPLVETAISNFRHKLQLYPYQVNSKLM 351
RDAITAPLVETAISNFRHKLQLYPYQVNSKL+
Sbjct: 16 RDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
>UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimum
latent virus|Rep: RNA replicase polyprotein - Erysimum
latent virus (ELV)
Length = 1748
Score = 38.7 bits (86), Expect = 0.039
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 169
HRD+I+APL+++++S + L+L+PY V +L+
Sbjct: 15 HRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
Score = 35.5 bits (78), Expect = 0.37
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +1
Query: 256 RDAITAPLVETAISNFRHKLQLYPYQVNSKLM 351
RD+I+APL+++++S + L+L+PY V +L+
Sbjct: 16 RDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 37.9 bits (84), Expect = 0.069
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 50 NTIHRLYHRDAITAPLVETAISNFRHKLQLYPYQVNSK 163
N + HRD + APL+E+ R L+LYP+ +N++
Sbjct: 8 NNLSSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAE 45
Score = 33.1 bits (72), Expect = 2.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 256 RDAITAPLVETAISNFRHKLQLYPYQVNSK 345
RD + APL+E+ R L+LYP+ +N++
Sbjct: 16 RDTVAAPLLESIAQPLRDSLELYPWAINAE 45
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 37.9 bits (84), Expect = 0.069
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQV 154
HRD + +PLVE A R LQLYPY +
Sbjct: 146 HRDTVCSPLVEAAAGPLRDSLQLYPYDI 173
Score = 34.7 bits (76), Expect = 0.64
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 256 RDAITAPLVETAISNFRHKLQLYPYQV 336
RD + +PLVE A R LQLYPY +
Sbjct: 147 RDTVCSPLVEAAAGPLRDSLQLYPYDI 173
>UniRef50_UPI000023F3F3 Cluster: hypothetical protein FG08939.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG08939.1
- Gibberella zeae PH-1
Length = 2643
Score = 35.9 bits (79), Expect = 0.28
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 82 HNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCAYHGFHQFSRHSR-HPR 258
H PS + + + +T I G F+ N+QS ++P F AY + H R HP+
Sbjct: 2064 HKSQPSQGKTEADKDKLTTSKILGAFKRSSKENRQSMVIPDFQAYQQHQMGAPHQRQHPQ 2123
Query: 259 DAIT 270
T
Sbjct: 2124 QHTT 2127
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 34.7 bits (76), Expect = 0.64
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQV 154
HRD ITAP+VE+ + R L+ YP+ +
Sbjct: 22 HRDTITAPIVESLATPLRRSLERYPWSI 49
Score = 31.5 bits (68), Expect = 6.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 256 RDAITAPLVETAISNFRHKLQLYPYQV 336
RD ITAP+VE+ + R L+ YP+ +
Sbjct: 23 RDTITAPIVESLATPLRRSLERYPWSI 49
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 34.3 bits (75), Expect = 0.85
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 53 TIHRLYHRDAITAPLVETAISNFRHKLQLYPYQV 154
T+ HRD I APL+ET S +R L+ +P+ V
Sbjct: 30 TLSSTIHRDTIAAPLMETLASPYRDSLRDFPWAV 63
>UniRef50_UPI000023F1B7 Cluster: hypothetical protein FG01632.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01632.1 - Gibberella zeae PH-1
Length = 1590
Score = 33.9 bits (74), Expect = 1.1
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 76 RRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCAYHGFHQFSRHSRHP 255
R H +P + QQ P Q P + Q H + Q+ P H F+QF +H++
Sbjct: 44 RAHGHNPQQQQQQQQPVQQ---PQELQQQEHSPQQRHQQMSPDM---HQFNQFQQHAQQD 97
Query: 256 RDAITAPL 279
R I +PL
Sbjct: 98 RGIIQSPL 105
>UniRef50_A0UZM9 Cluster: Fibronectin, type III precursor; n=1;
Clostridium cellulolyticum H10|Rep: Fibronectin, type III
precursor - Clostridium cellulolyticum H10
Length = 1318
Score = 33.1 bits (72), Expect = 2.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 62 RLYHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMT*TTNKVSL 196
++Y ++T VE SNFR+ +LY Y N KL + T +S+
Sbjct: 875 KVYECGSVTEFKVEGLTSNFRYYARLYAYDPNKKLRSLPTQSISV 919
>UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 468
Score = 33.1 bits (72), Expect = 2.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 64 FISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
F P++ N SP QQ Q S +PIS +Q + NQQ Q P
Sbjct: 103 FPVPQQVNSSPMLGAFQQSIPQPSQIPISQMYQTAPVLNQQQQYKP 148
>UniRef50_Q8QN85 Cluster: EsV-1-204; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-204 - Ectocarpus siliculosus virus 1
Length = 450
Score = 32.7 bits (71), Expect = 2.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 34 AWLSRQHHPPFISPRRHNG---SPSGNRHQQFPSQASTLPISGKFQAHDINNQ 183
AW SRQH P +SP +H+G +P+ Q P+ A++ G +A N +
Sbjct: 397 AWQSRQHIRPLLSPVQHSGLMETPAAAAATQAPADAASTRAPGIAEASFRNGE 449
>UniRef50_Q9VEE5 Cluster: CG33547-PA; n=6; Eumetazoa|Rep: CG33547-PA
- Drosophila melanogaster (Fruit fly)
Length = 2938
Score = 32.7 bits (71), Expect = 2.6
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCAYHGFH 228
QH + P++H SP + QQ Q + + + Q H Q Q+ + A H
Sbjct: 301 QHQQQHLMPQQHRPSPQQHSQQQQQQQQHSQQFAARQQQHQQQQHQQQVQQSYHAQ--IH 358
Query: 229 QFSRHSRHP 255
Q + HP
Sbjct: 359 QQPQQHPHP 367
>UniRef50_A3MW94 Cluster: Putative uncharacterized protein
precursor; n=1; Pyrobaculum calidifontis JCM 11548|Rep:
Putative uncharacterized protein precursor - Pyrobaculum
calidifontis (strain JCM 11548 / VA1)
Length = 234
Score = 32.7 bits (71), Expect = 2.6
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = -3
Query: 361 LFMS*AWNLPDMGKVEAC----DGNC*WRFPLGEPLWRLGDGESVD*IGESHDKRRSQGQ 194
+F AW DMGK E C W P+G P ++G G+ V IG +
Sbjct: 164 VFHDSAWAQVDMGKYEVCLECHSPWSRWYVPIG-PDCQIGAGKGVPCIGCHGPRAMGFSP 222
Query: 193 ADFVGCL-CH 167
ADF+ C CH
Sbjct: 223 ADFLDCARCH 232
>UniRef50_P52958 Cluster: Cutinase transcription factor 1 alpha;
n=12; Pezizomycotina|Rep: Cutinase transcription factor
1 alpha - Fusarium solani subsp. pisi (Nectria
haematococca)
Length = 909
Score = 32.7 bits (71), Expect = 2.6
Identities = 25/79 (31%), Positives = 31/79 (39%)
Frame = +1
Query: 31 LAWLSRQHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFC 210
L L R H PP S R + SP +R+ F + A I AHD Q + P F
Sbjct: 526 LCLLHRAHMPPGGSARFPDPSPYPSRNIAFQAAAMITSIVENLAAHD----QLRYCPAFV 581
Query: 211 AYHGFHQFSRHSRHPRDAI 267
Y F RH R +
Sbjct: 582 VYSLFSALIRHVYQMRSPV 600
>UniRef50_Q9NRN7 Cluster: L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase; n=24;
Euteleostomi|Rep: L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase - Homo
sapiens (Human)
Length = 309
Score = 32.7 bits (71), Expect = 2.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 237 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
Score = 31.9 bits (69), Expect = 4.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 248 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>UniRef50_UPI0000EBE732 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 302
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +1
Query: 46 RQHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGK 156
RQHH P RRH SP R + FP P SG+
Sbjct: 84 RQHHGPAPGDRRHGESPGTGRSEDFPQ----FPASGR 116
>UniRef50_UPI000065E9C7 Cluster: KIAA2018 (KIAA2018), mRNA; n=1;
Takifugu rubripes|Rep: KIAA2018 (KIAA2018), mRNA -
Takifugu rubripes
Length = 2068
Score = 32.3 bits (70), Expect = 3.4
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 55 HPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQ 183
+PP+ SP H PS Q FP+Q T P + K A +NN+
Sbjct: 1926 YPPY-SPAAHPSLPSDVTLQYFPNQMFTSPSADKGSAPPLNNR 1967
>UniRef50_Q4S555 Cluster: Chromosome 6 SCAF14737, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 6
SCAF14737, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2045
Score = 32.3 bits (70), Expect = 3.4
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 55 HPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQ 183
+PP+ SP H PS Q FP+Q T P + K A +NN+
Sbjct: 1903 YPPY-SPAAHPSLPSDVTLQYFPNQMFTSPSADKGSAPPLNNR 1944
>UniRef50_Q5AF61 Cluster: Potential fungal zinc cluster
transcription factor; n=1; Candida albicans|Rep:
Potential fungal zinc cluster transcription factor -
Candida albicans (Yeast)
Length = 1029
Score = 32.3 bits (70), Expect = 3.4
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 98 VETAISNFRHKLQLYPYQVNSKLMT*TTNKVSLSLASALIMAFTNLVD 241
++++I F +Q YP+ + T T N + L +S +I+++TNL++
Sbjct: 559 LQSSIGIFIRLIQSYPFPNETTTTTITDNSLILFFSSLIILSYTNLIN 606
>UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan
nuclear hormone receptor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to orphan nuclear
hormone receptor - Strongylocentrotus purpuratus
Length = 723
Score = 31.9 bits (69), Expect = 4.5
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 46 RQHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCAYHGF 225
+QHHP SP H + + QQ Q+ T P + Q+ QQSQ H
Sbjct: 87 QQHHPHHHSPPHHQATQPHQQVQQQHPQSQTSPPLQQPQSQQQQQQQSQ---HRVTPHNH 143
Query: 226 HQFSRHSRHPRDAITAPL 279
Q + H R + P+
Sbjct: 144 QQHTPHQSPQRQSPVTPM 161
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 31.9 bits (69), Expect = 4.5
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQVNSKL 166
HRD I PL+E +R L YP+ + + L
Sbjct: 103 HRDTIATPLMEALAEPYRQSLSTYPWHIPTNL 134
>UniRef50_A5C2L0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 447
Score = 31.9 bits (69), Expect = 4.5
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Frame = +1
Query: 4 KSACPW-LLRLAWLSRQHHPPFISPRRH--NGSPSGNRHQQFPSQASTLPISGKFQAHDI 174
+ ACP L+ LA + HPP P N P G +++ ST F H I
Sbjct: 61 QEACPGPLVALAVIDWPPHPPIQLPVGDLVNRGPLGFVNRRLDDMLST-----SFSPHII 115
Query: 175 NNQQSQ--LVPGFCAYHGFHQFSRHSRHPRDAITAPLVETAI 294
N++ + +VP F Y G + H H R +T + A+
Sbjct: 116 NHEPPRGFMVPKFSTYDGTNDPFDHIMHYRQLMTLDIENDAL 157
>UniRef50_UPI000023D8D8 Cluster: hypothetical protein FG08716.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08716.1 - Gibberella zeae PH-1
Length = 1295
Score = 31.1 bits (67), Expect = 7.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 55 HPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVPGFCAY 216
HP PR GSP+ N +Q ++ S + K +H N SQL P + ++
Sbjct: 5 HPLSELPRGSRGSPNQNHNQTNGNRESPTKKTSKAMSHKSNEIASQLRPSWLSW 58
>UniRef50_Q98FN9 Cluster: Phosphonate monoester hydrolase; n=4;
Alphaproteobacteria|Rep: Phosphonate monoester hydrolase
- Rhizobium loti (Mesorhizobium loti)
Length = 522
Score = 31.1 bits (67), Expect = 7.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 1 QKSACPWLLRLAWLSRQHHPPFISPRRHN 87
Q+ A PW L+++S HPPFI P +N
Sbjct: 202 QEQAAPWFAHLSFISP--HPPFIVPEPYN 228
>UniRef50_A5ZRS3 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 175
Score = 31.1 bits (67), Expect = 7.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 38 GFHANTIHRLYHRDAITAPLVETAISNFRHKLQLYPYQ 151
GF + R+Y+ D I P++ TAI +F + L +Y Q
Sbjct: 81 GFLSGYAFRIYYDDDIKVPMLLTAIMDFLYNLAVYALQ 118
>UniRef50_A0YPI4 Cluster: Serine/threonine kinase; n=1; Lyngbya sp.
PCC 8106|Rep: Serine/threonine kinase - Lyngbya sp. PCC
8106
Length = 481
Score = 31.1 bits (67), Expect = 7.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 280 LGEPLWRLGDGESVD*IGESHDKRRSQGQADFVGCLCHELGIY-LIWVK 137
L + W GD E+ + E+ K R+ ++DF C +LGI +W+K
Sbjct: 343 LSQKQWEYGDEETAKRLREAAGKNRNLHRSDFDYLPCEDLGIINNLWMK 391
>UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8;
Tymovirus|Rep: RNA replicase polyprotein - Turnip yellow
mosaic virus
Length = 1844
Score = 31.1 bits (67), Expect = 7.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 169
HRD P++E+ + + R +Q YP+ + +L+
Sbjct: 15 HRDPSLHPILESTVDSIRSSIQTYPWSIPKELL 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,804,591
Number of Sequences: 1657284
Number of extensions: 8738816
Number of successful extensions: 22089
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 17543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22076
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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