Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021905X
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   2.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   2.5  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   3.3  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    21   3.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.8  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 393 HRSQGQADFXGCLCHE 346
           HR Q Q  F G  CHE
Sbjct: 52  HRCQCQPGFTGKYCHE 67


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 85  NGSPSGNRHQQFPSQASTLP 144
           + SPSG+  Q   S AST P
Sbjct: 37  SSSPSGSSPQHSSSSASTSP 56



 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 267 NGSPSGNRHQQFPSQASTLP 326
           + SPSG+  Q   S AST P
Sbjct: 37  SSSPSGSSPQHSSSSASTSP 56


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 85  NGSPSGNRHQQFPSQASTLP 144
           + SPSG+  Q   S AST P
Sbjct: 37  SSSPSGSSPQHSSSSASTSP 56



 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 267 NGSPSGNRHQQFPSQASTLP 326
           + SPSG+  Q   S AST P
Sbjct: 37  SSSPSGSSPQHSSSSASTSP 56


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 46  RQHHPPFISPRRHNGSPSGNR 108
           RQH P FI+    + S  GN+
Sbjct: 76  RQHIPNFIAAAFESNSRGGNK 96


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 46  RQHHPPFISPRRHNGSPSGNR 108
           RQH P FI+    + S  GN+
Sbjct: 16  RQHIPNFIAAAFESNSRGGNK 36


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 271 PLWRLGDGESVD*IGESHDKRRSQG 197
           P W L DG       ++HD +R+ G
Sbjct: 287 PEWNLLDGLDAVAFIDNHDNQRTGG 311


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 271 PLWRLGDGESVD*IGESHDKRRSQG 197
           P W L DG       ++HD +R+ G
Sbjct: 288 PEWNLLDGLDAVAFIDNHDNQRTGG 312


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 271 PLWRLGDGESVD*IGESHDKRRSQG 197
           P W L DG       ++HD +R+ G
Sbjct: 288 PEWNLLDGLDAVAFIDNHDNQRTGG 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,693
Number of Sequences: 336
Number of extensions: 2143
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)