Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021905X
         (393 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.57 
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   0.75 
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   1.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   4.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   4.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 0.57
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 40  LSRQHHPPFISPRRHNGSPSGNRHQQFPSQAST--LPISGKFQAH 168
           L  Q HPP    +     PS  +HQQ   Q  +  LP  G  + H
Sbjct: 230 LPHQQHPPGAGVQGAGPIPSQQKHQQHQQQQQSVLLPKHGTARQH 274


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 0.75
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +1

Query: 82  HNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
           H   P     QQ+ S     P+  K + HD      +L P
Sbjct: 314 HQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353



 Score = 25.0 bits (52), Expect = 0.99
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +3

Query: 264 HNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
           H   P     QQ+ S     P+  K + HD      +L P
Sbjct: 314 HQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 121 PSQASTLPISGKFQAHDINNQQSQLVPG 204
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35



 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 303 PSQASTLPISGKFQAHDINNQXSQLVPG 386
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +1

Query: 52  HHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
           HHP  + P  H    +G  H   PS +   PI  + Q   +  + S   P
Sbjct: 183 HHPALLHPAYH----TGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRP 228


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 14/50 (28%), Positives = 20/50 (40%)
 Frame = +1

Query: 52  HHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
           HHP  + P  H    +G  H   PS +   PI  + Q   +  + S   P
Sbjct: 183 HHPALLHPAYH----TGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRP 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,866
Number of Sequences: 2352
Number of extensions: 8127
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)