BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021905X
(393 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016728-1|AAH16728.1| 309|Homo sapiens aminoadipate-semialdehy... 33 0.44
BC015470-1|AAH15470.1| 309|Homo sapiens aminoadipate-semialdehy... 33 0.44
AL050073-1|CAB43257.1| 211|Homo sapiens hypothetical protein pr... 33 0.44
AF302110-1|AAG30872.1| 309|Homo sapiens alpha-aminoadipic semia... 33 0.44
AF201943-1|AAF86879.1| 333|Homo sapiens HAH-P protein. 33 0.44
AF151838-1|AAD34075.1| 309|Homo sapiens CGI-80 protein protein. 33 0.44
AF136978-1|AAG49439.1| 314|Homo sapiens proteinx0005 protein. 33 0.44
BC002607-1|AAH02607.1| 593|Homo sapiens likely ortholog of rat ... 30 2.4
AB040879-1|BAA95970.1| 645|Homo sapiens KIAA1446 protein protein. 30 2.4
Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel tetrame... 29 5.5
AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerizat... 29 5.5
AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel tetra... 29 5.5
AJ578256-1|CAE18257.1| 109|Homo sapiens immunoglobulin lambda-1... 29 5.5
AK126501-1|BAC86569.1| 314|Homo sapiens protein ( Homo sapiens ... 29 7.2
BC065375-1|AAH65375.1| 458|Homo sapiens secretion regulating gu... 28 9.5
AJ243951-1|CAB60833.1| 288|Homo sapiens deafness locus associat... 28 9.5
AJ243950-1|CAB60832.1| 458|Homo sapiens deafness locus associat... 28 9.5
>BC016728-1|AAH16728.1| 309|Homo sapiens aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 237 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 248 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>BC015470-1|AAH15470.1| 309|Homo sapiens aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 237 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 248 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>AL050073-1|CAB43257.1| 211|Homo sapiens hypothetical protein
protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 139 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 185
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 150 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 185
>AF302110-1|AAG30872.1| 309|Homo sapiens alpha-aminoadipic
semialdehyde dehydrogenase-phosphopantetheinyl
transferase protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 237 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 248 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>AF201943-1|AAF86879.1| 333|Homo sapiens HAH-P protein.
Length = 333
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 261 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 307
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 272 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 307
>AF151838-1|AAD34075.1| 309|Homo sapiens CGI-80 protein protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 237 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 248 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>AF136978-1|AAG49439.1| 314|Homo sapiens proteinx0005 protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 201
+HH ++ R+ P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 238 EHHFVAVALRK----PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 284
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQLVP 383
P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 249 PDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 284
>BC002607-1|AAH02607.1| 593|Homo sapiens likely ortholog of rat
brain-enriched guanylate kinase-associated protein
protein.
Length = 593
Score = 30.3 bits (65), Expect = 2.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 94 PSGNRHQQFPSQASTLPISGKFQAHDINNQQSQ 192
P+G +H+ FPS A +LP S + + +++ +
Sbjct: 279 PAGFQHEAFPSYAGSLPTSSSYSSFSATSEEKE 311
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQ 374
P+G +H+ FPS A +LP S + + ++ +
Sbjct: 279 PAGFQHEAFPSYAGSLPTSSSYSSFSATSEEKE 311
>AB040879-1|BAA95970.1| 645|Homo sapiens KIAA1446 protein protein.
Length = 645
Score = 30.3 bits (65), Expect = 2.4
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 94 PSGNRHQQFPSQASTLPISGKFQAHDINNQQSQ 192
P+G +H+ FPS A +LP S + + +++ +
Sbjct: 331 PAGFQHEAFPSYAGSLPTSSSYSSFSATSEEKE 363
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 276 PSGNRHQQFPSQASTLPISGKFQAHDINNQXSQ 374
P+G +H+ FPS A +LP S + + ++ +
Sbjct: 331 PAGFQHEAFPSYAGSLPTSSSYSSFSATSEEKE 363
>Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 43 SRQHHPPFISPRRHNGSPSG---NRHQQFPSQASTLPISGKF 159
++++H PFI+P R S G N H Q P + + L +F
Sbjct: 16 NKRNHEPFIAPERFGNSSVGFGSNSHSQAPEKVTLLVDGTRF 57
>AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerization
protein protein.
Length = 419
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 43 SRQHHPPFISPRRHNGSPSG---NRHQQFPSQASTLPISGKF 159
++++H PFI+P R S G N H Q P + + L +F
Sbjct: 87 NKRNHEPFIAPERFGNSSVGFGSNSHSQAPEKVTLLVDGTRF 128
>AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 43 SRQHHPPFISPRRHNGSPSG---NRHQQFPSQASTLPISGKF 159
++++H PFI+P R S G N H Q P + + L +F
Sbjct: 16 NKRNHEPFIAPERFGNSSVGFGSNSHSQAPEKVTLLVDGTRF 57
>AJ578256-1|CAE18257.1| 109|Homo sapiens immunoglobulin lambda-1
variable region protein.
Length = 109
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1
Query: 34 AWLSR-QHHPPFISPRRHNGSPSGN 105
AWL + Q HPP + R+N PSGN
Sbjct: 35 AWLQQHQGHPPKLLSYRNNNRPSGN 59
>AK126501-1|BAC86569.1| 314|Homo sapiens protein ( Homo sapiens
cDNA FLJ44537 fis, clone UTERU3005049. ).
Length = 314
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 346 AWNLPDMGKVEACDGNC*WRFPLG 275
A +LP M K+ CDG C W LG
Sbjct: 158 ALSLPKMQKLAGCDGGCLWSQLLG 181
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 164 AWNLPDMGKVEACDGNC*WRFPLG 93
A +LP M K+ CDG C W LG
Sbjct: 158 ALSLPKMQKLAGCDGGCLWSQLLG 181
>BC065375-1|AAH65375.1| 458|Homo sapiens secretion regulating
guanine nucleotide exchange factor protein.
Length = 458
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 103 NRHQQFPSQASTLPISGKFQAHDINNQQ 186
N+H Q ++A+ LP+ K +AH N++
Sbjct: 239 NKHGQLANEAAFLPVPQKIEAHCFQNEK 266
>AJ243951-1|CAB60833.1| 288|Homo sapiens deafness locus associated
putative guanine nucleotide exchange factor protein.
Length = 288
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 103 NRHQQFPSQASTLPISGKFQAHDINNQQ 186
N+H Q ++A+ LP+ K +AH N++
Sbjct: 239 NKHGQLANEAAFLPVPQKIEAHCFQNEK 266
>AJ243950-1|CAB60832.1| 458|Homo sapiens deafness locus associated
putative guanine nucleotide exchange factor protein.
Length = 458
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 103 NRHQQFPSQASTLPISGKFQAHDINNQQ 186
N+H Q ++A+ LP+ K +AH N++
Sbjct: 239 NKHGQLANEAAFLPVPQKIEAHCFQNEK 266
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,481,431
Number of Sequences: 237096
Number of extensions: 1350142
Number of successful extensions: 3221
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3221
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -