Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021904X
(430 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 150 6e-37
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 145 1e-35
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 1e-35
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 142 1e-34
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 128 3e-30
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 104 4e-23
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 69 2e-12
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-12
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 68 4e-12
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 4e-12
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 65 2e-11
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 60 8e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 8e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 54 4e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 9e-08
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 5e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 3e-05
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 38 0.004
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 31 0.31
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.2
SB_33571| Best HMM Match : Vicilin_N (HMM E-Value=3.9) 28 2.9
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 2.9
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0) 28 3.8
SB_45210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09) 27 5.0
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 27 5.0
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 27 6.6
SB_498| Best HMM Match : DUF1067 (HMM E-Value=5.8) 27 6.6
SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24) 27 6.6
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 27 6.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 27 8.7
SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11) 27 8.7
SB_37420| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 150 bits (363), Expect = 6e-37
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = +2
Query: 44 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 223
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 224 KYVPRAILVDWSP 262
KYVPRA+LVD P
Sbjct: 271 KYVPRAVLVDLEP 283
Score = 128 bits (308), Expect = 3e-30
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKE+ES
Sbjct: 281 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 339
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 145 bits (352), Expect = 1e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLEP 70
Score = 128 bits (308), Expect = 3e-30
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKE+ES
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 126
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 145 bits (352), Expect = 1e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLEP 70
Score = 58.4 bits (135), Expect = 2e-09
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVF 327
LEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 142 bits (343), Expect = 1e-34
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 233 PRAILVDWSP 262
PR++L+D P
Sbjct: 61 PRSVLIDLEP 70
Score = 126 bits (305), Expect = 6e-30
Identities = 56/59 (94%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+ES
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAES 126
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 128 bits (308), Expect = 3e-30
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKE+ES
Sbjct: 13 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAES 71
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2
Query: 221 GKYVPRAILVDWSP 262
GKYVPRA+LVD P
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 104 bits (249), Expect = 4e-23
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+E+
Sbjct: 24 LEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAEN 82
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 215 SGGKYVPRAILVDWSP 262
+GG+YVPR+ILVD P
Sbjct: 11 TGGRYVPRSILVDLEP 26
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD IRK
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRK 124
Score = 68.1 bits (159), Expect = 3e-12
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD IRK
Sbjct: 503 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRK 557
Score = 62.1 bits (144), Expect = 2e-10
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 220
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 221 GKYVPRAILVDWSP 262
GK+VPRA+ VD P
Sbjct: 492 GKHVPRAVFVDLEP 505
Score = 61.7 bits (143), Expect = 3e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 68.5 bits (160), Expect = 2e-12
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD IRK
Sbjct: 655 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 709
Score = 67.7 bits (158), Expect = 4e-12
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD IRK
Sbjct: 134 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 188
Score = 60.1 bits (139), Expect = 8e-10
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 44 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 217
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 218 GGKYVPRAILVDWSP 262
GK+VPRA+ VD P
Sbjct: 122 AGKHVPRAVFVDLEP 136
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 574 VPRAVFVDLEP 584
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 68.1 bits (159), Expect = 3e-12
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRK 124
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ D P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 67.7 bits (158), Expect = 4e-12
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD IRK
Sbjct: 69 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRK 123
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 61 VPRAVFVDLEP 71
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 67.7 bits (158), Expect = 4e-12
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD IRK
Sbjct: 874 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRK 928
Score = 65.3 bits (152), Expect = 2e-11
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK
Sbjct: 441 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRK 495
Score = 58.8 bits (136), Expect = 2e-09
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 220
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 221 GKYVPRAILVDWSP 262
GK+VPRA+ D P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 58.4 bits (135), Expect = 2e-09
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 230 VPRAILVDWSP 262
VPRA+ VD P
Sbjct: 433 VPRAVFVDLEP 443
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 66.1 bits (154), Expect = 1e-11
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD IRK
Sbjct: 488 LEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRK 542
Score = 64.9 bits (151), Expect = 3e-11
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK
Sbjct: 55 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRK 109
Score = 61.7 bits (143), Expect = 3e-10
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 220
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 221 GKYVPRAILVDWSPA 265
GK+VPRA+ VD P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 98 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDWSP 262
+G WE+ EHGI P G D + + N +++E GK+VPRA+ D P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 65.3 bits (152), Expect = 2e-11
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRK 124
Score = 60.5 bits (140), Expect = 6e-10
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 64.9 bits (151), Expect = 3e-11
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 227 YVPRAILVDWSPA 265
+VPRA+ VD P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD IRK
Sbjct: 35 LEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 89
Score = 31.1 bits (67), Expect = 0.41
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 185 ERINVYYNEASGGKYVPRAILVDWSP 262
+ N ++ E GK+VPRA+ VD P
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 271 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD IRK
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 61
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 62.1 bits (144), Expect = 2e-10
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSPAPWTLSAPDL 292
+VPRA+ VD P LS L
Sbjct: 61 HVPRAVFVDLEPTVVALSPEQL 82
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 310 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
P+ + G+ A NN+A+GHYT G + VD VLD +RK
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRK 114
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 62.1 bits (144), Expect = 2e-10
Identities = 25/58 (43%), Positives = 40/58 (68%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D IRK ++
Sbjct: 981 LEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTD 1038
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 206 NEASGGKYVPRAILVDWSP 262
+EA+ GKYVPRA+LVD P
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 60.1 bits (139), Expect = 8e-10
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD IRK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 60.1 bits (139), Expect = 8e-10
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD IRK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 54.4 bits (125), Expect = 4e-08
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD IRK
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRK 49
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 53.2 bits (122), Expect = 9e-08
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1
Query: 277 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ IRK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +1
Query: 331 QSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
Q+ A NNWAKG YTEGAEL+DS +D IRK +E+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAEN 34
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 41 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 208
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 209 EASGGKY 229
E + GK+
Sbjct: 250 ETASGKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 110 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 211
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 310 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
P F Q G+GNNWA G G + +D VLD++++E E
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVE 133
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2
Query: 62 IVHLQAGQCGNQIGAKFWEIISDE 133
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 31.5 bits (68), Expect = 0.31
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 354
+E G ++++ GP +F + SG GNNW
Sbjct: 82 MEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 5.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 365 CPLAQLLPAPDCPKTKLSGRKICP 294
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_33571| Best HMM Match : Vicilin_N (HMM E-Value=3.9)
Length = 190
Score = 28.3 bits (60), Expect = 2.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 290 GPERTESMVPGSSRREWRGARTCR 219
G +RT + G +R+EWRG +CR
Sbjct: 158 GEDRTLAEHQGPTRQEWRGPYSCR 181
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 147 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPF 245
P +P++ + T + S S +T PPA+ + P PF
Sbjct: 793 PAIPSLMSSTLTSSISTTSTGMPPASLSTPTPF 825
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 208 IVVYIDALQLQVRVPM-VGTGGVDAVLVRDDLPELSSN 98
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 27.9 bits (59), Expect = 3.8
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Frame = +3
Query: 147 PPVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSSTGARHHGLCPLRT-----FRTDL 305
P P ++S +M+T K TCPA +S G LCP +RTDL
Sbjct: 131 PAAPPAACSGATYSEAMWTECK-----TCPAGYSCPGNARKELCPFSDSTGYYYRTDL 183
>SB_4425| Best HMM Match : DNA_ligase_A_M (HMM E-Value=0)
Length = 575
Score = 27.9 bits (59), Expect = 3.8
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 188 APTASQSPHG--RHRWGRCRARQR*SPRT*LQSGYHIGRPVDERFPSFCISY 39
A AS S +G HRW R ARQR T ++G GR +D F F + +
Sbjct: 468 AQGASPSAYGASHHRWPRELARQRMGLLTSAETGSIPGRDMDGIFLFFGLEF 519
>SB_45210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 3.8
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -3
Query: 410 ITSRTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSSRREWRG 234
+ S+T S S++P CP + C + S P P R+ S P SR RG
Sbjct: 55 VPSKTRSRSASP---CPPISKKISTSCDRRDRSRSYSSPVSPSRSNSSSPRMSRSAKRG 110
>SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09)
Length = 435
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 155 HRWGRCRARQR*SPRT*LQSGYHIGRPVD 69
HRW ARQR P T ++G GR +D
Sbjct: 396 HRWPSVLARQRMRPLTSAETGSTPGRDID 424
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 147 PPVP-TMGTLTCSWSASMYTTMKPPAASTCPAP 242
PP P + G L + + ++ T+ PP+ CP P
Sbjct: 269 PPCPASSGCLVAAATGNLTVTLVPPSCPPCPPP 301
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.1 bits (57), Expect = 6.6
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDE---HGIDPTGAYHGDSDLQLERINVYYNEASGG 223
+RE++ LQ G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 224 KYVPRAILVDWSPAPWTLSAPDL 292
Y PR +L D + LS L
Sbjct: 83 -YTPRLLLYDLKGSLRNLSTEGL 104
>SB_498| Best HMM Match : DUF1067 (HMM E-Value=5.8)
Length = 185
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 425 SDSLRITSRTESTSSAPSV*CPLAQLLPAPDCPKT-KLSGRKICPK 291
SD I+S + + S CPL +L CP+T LS RK CP+
Sbjct: 129 SDPTTISSDKSTDPTLISRTCPLTLVLLVRTCPRTLSLSVRK-CPR 173
>SB_12136| Best HMM Match : ResIII (HMM E-Value=0.24)
Length = 1118
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1
Query: 238 AGHVLAAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVRDDLPELSSNLVTTLAG 77
+G + A V+Y + ++ P G GG D+++VRD E ++ L LAG
Sbjct: 662 SGDLAMAAAREVLYRVGKKDSIKFPHSGPGGEDSIVVRDH--EEAAYLTNLLAG 713
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 27.1 bits (57), Expect = 6.6
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 178 AVGAHQCILQ*SLRRQVRAPRHSRRLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 357
A G + L+ S RR HS +P + ++ FGQ R D SG G+N
Sbjct: 873 AAGQEKGTLESSSRRDTSNQEHSTPEQPDHQNQEQAEGFGQKKRSDEL----SGNGDNND 928
Query: 358 KGHYT---EGAELVDSVLDVIRKE 420
+G+ T G++ + ++ +R E
Sbjct: 929 QGYSTTEQPGSQNQEQAVNSVRVE 952
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 341 APDCPKTKLSGRKICPKGPERTES 270
A DCP ++ +GR +CP P +S
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQS 161
>SB_28044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 229 RAPRHSRRLEPGTMDSVRSGPFGQIFRPDNFVFG 330
R P HSR + G M+ + + F + P FVFG
Sbjct: 524 RTPTHSRIIARGVMNHIETDLFNGLI-PQCFVFG 556
>SB_48913| Best HMM Match : TSP_1 (HMM E-Value=1.8e-11)
Length = 1068
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 150 PVPTMGTLTCSWSASMYTTMKPPAASTC 233
PV T T + +AS YTT P ++TC
Sbjct: 733 PVTTQDCETATCTASWYTTEWSPCSATC 760
>SB_37420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 229 RAPRHSRRLEPGTMDSVRSGPFGQIFRPDNFVFG 330
R P HSR + G M+ + + F + P FVFG
Sbjct: 168 RTPTHSRIIARGVMNHIETDLFNGLI-PQCFVFG 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,764
Number of Sequences: 59808
Number of extensions: 318881
Number of successful extensions: 1019
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -