Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021904X
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 144 2e-35
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 136 8e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 133 4e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 133 4e-32
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 128 1e-30
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 127 3e-30
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 105 1e-23
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 105 1e-23
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 74 5e-14
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 67 6e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 67 6e-12
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 67 6e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 67 6e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 66 1e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 65 2e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 65 2e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 63 7e-11
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 62 1e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 62 1e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 62 1e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 62 1e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 2e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 2e-09
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 56 1e-08
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 2.5
Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 5.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 144 bits (350), Expect = 2e-35
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 233 PRAILVDWSP 262
PRA LVD P
Sbjct: 61 PRACLVDLEP 70
Score = 124 bits (300), Expect = 2e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+ES
Sbjct: 68 LEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAES 126
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 136 bits (328), Expect = 8e-33
Identities = 59/70 (84%), Positives = 64/70 (91%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
Score = 124 bits (299), Expect = 3e-29
Identities = 54/58 (93%), Positives = 58/58 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAE 125
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 133 bits (322), Expect = 4e-32
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
Score = 124 bits (300), Expect = 2e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+ES
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAES 126
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 133 bits (322), Expect = 4e-32
Identities = 58/70 (82%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
Score = 124 bits (300), Expect = 2e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+ES
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAES 126
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 128 bits (310), Expect = 1e-30
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
Score = 124 bits (300), Expect = 2e-29
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVIRKE+E
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAE 125
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 127 bits (307), Expect = 3e-30
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 233 PRAILVDWSP 262
PRA+LVD P
Sbjct: 61 PRAVLVDLEP 70
Score = 124 bits (300), Expect = 2e-29
Identities = 55/58 (94%), Positives = 58/58 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVIRKE+E
Sbjct: 68 LEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAE 125
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (252), Expect = 1e-23
Identities = 46/70 (65%), Positives = 53/70 (75%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLDP 70
Score = 78.6 bits (185), Expect = 2e-15
Identities = 32/59 (54%), Positives = 49/59 (83%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
L+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL VIR+E+E+
Sbjct: 68 LDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEA 126
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 105 bits (252), Expect = 1e-23
Identities = 46/70 (65%), Positives = 53/70 (75%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 233 PRAILVDWSP 262
PRAILVD P
Sbjct: 61 PRAILVDLDP 70
Score = 78.6 bits (185), Expect = 2e-15
Identities = 32/59 (54%), Positives = 49/59 (83%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
L+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL VIR+E+E+
Sbjct: 68 LDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEA 126
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 73.7 bits (173), Expect = 5e-14
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD IRK++E+
Sbjct: 73 LEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTEN 131
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTG-AYHGDSDLQLERINVYYNEASGGKYV 232
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 233 PRAILVDWSP 262
PRAI VD P
Sbjct: 66 PRAIYVDLEP 75
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 68.1 bits (159), Expect = 2e-12
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 226
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 227 YVPRAILVDWSP 262
+VPR + VD P
Sbjct: 67 HVPRCLFVDLEP 78
Score = 55.6 bits (128), Expect = 1e-08
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D +++ +E+
Sbjct: 76 LEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAEN 134
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 66.9 bits (156), Expect = 6e-12
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD IR+ +++
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Score = 64.5 bits (150), Expect = 3e-11
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 66.9 bits (156), Expect = 6e-12
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD IR+ +++
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Score = 66.5 bits (155), Expect = 8e-12
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 66.9 bits (156), Expect = 6e-12
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD IR+ +++
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Score = 66.5 bits (155), Expect = 8e-12
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 66.9 bits (156), Expect = 6e-12
Identities = 26/59 (44%), Positives = 43/59 (72%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD IR+ +++
Sbjct: 68 LEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Score = 64.5 bits (150), Expect = 3e-11
Identities = 28/70 (40%), Positives = 39/70 (55%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 66.1 bits (154), Expect = 1e-11
Identities = 26/58 (44%), Positives = 41/58 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D +R+ +E
Sbjct: 70 LEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTE 127
Score = 65.3 bits (152), Expect = 2e-11
Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 226
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 227 YVPRAILVDWSP 262
+VPRAI VD P
Sbjct: 61 HVPRAIFVDLEP 72
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGG 223
+ RE++ + GQ G Q+G WE+ EHGI P G + + L + + N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 224 KYVPRAILVDWSPAP 268
K+VPRAI+VD P P
Sbjct: 65 KHVPRAIMVDLEPTP 79
Score = 61.3 bits (142), Expect = 3e-10
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D +R+ E+
Sbjct: 75 LEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVEN 133
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 64.9 bits (151), Expect = 2e-11
Identities = 25/59 (42%), Positives = 42/59 (71%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD IR+ +++
Sbjct: 68 LEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 64.9 bits (151), Expect = 2e-11
Identities = 25/59 (42%), Positives = 42/59 (71%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD IR+ +++
Sbjct: 68 LEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 61 PRSIFVDLEP 70
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 63.3 bits (147), Expect = 7e-11
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRK 417
LEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD IR+
Sbjct: 67 LEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRR 121
Score = 54.8 bits (126), Expect = 2e-08
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 233 PRAILVDWSP 262
PR+I VD P
Sbjct: 60 PRSIFVDLEP 69
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 62.5 bits (145), Expect = 1e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 227 YVPRAILVDWSP 262
+VPRA++VD P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD IR+ +++
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD IR+ +++
Sbjct: 69 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 127
Score = 60.5 bits (140), Expect = 5e-10
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 229
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 230 VPRAILVDWSP 262
VPRA++VD P
Sbjct: 61 VPRAVMVDLEP 71
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 62.5 bits (145), Expect = 1e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 227 YVPRAILVDWSP 262
+VPRA++VD P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD IR+ +++
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 62.5 bits (145), Expect = 1e-10
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 227 YVPRAILVDWSP 262
+VPRA++VD P
Sbjct: 61 HVPRAVMVDLEP 72
Score = 62.5 bits (145), Expect = 1e-10
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD IR+ +++
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 62 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 241
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 242 ILVDWSP 262
+LVD P
Sbjct: 66 VLVDLEP 72
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 253 LEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVIRKES 423
LEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+I +E+
Sbjct: 70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREA 128
Query: 424 ES 429
E+
Sbjct: 129 EN 130
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 62 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 241
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 242 ILVDWSP 262
+LVD P
Sbjct: 66 VLVDLEP 72
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 253 LEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVIRKES 423
LEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D+I +E+
Sbjct: 70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREA 128
Query: 424 ES 429
E+
Sbjct: 129 EN 130
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 55.6 bits (128), Expect = 1e-08
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D +++ +E+
Sbjct: 48 LEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAEN 106
Score = 46.4 bits (105), Expect = 9e-06
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 131 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDWSP 262
EHGI P G YH + D + E IN ++ E +GGK+VPR + VD P
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEP 50
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3
Query: 413 RITSRTESTSSAPSV*CPLAQLLPAPDCP 327
RI+ + S SS+PS CP LLP P CP
Sbjct: 301 RISLASTSASSSPSDPCPSPPLLP-PVCP 328
>Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical
protein C05C10.1 protein.
Length = 471
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 150 PVPTMGTL-TCSWSASMYTTM--KPPAASTCPAPFS 248
P+P + T+ C W S YT KPP C P S
Sbjct: 370 PIPDINTVGCCQWPFSPYTNSASKPPMDFECSEPLS 405
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 119 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVD 253
I S+ H I T + H DS R + GG + R IL+D
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILID 145
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 150 PVPTMGTLTCSWSASMYTTMKPPAASTCPAPFSST 254
P PT T T + A TT KP +T PAP +++
Sbjct: 429 PKPTTTTTTTTTPAPT-TTQKPTTTTTTPAPTTTS 462
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 189 ASMYTTMKPPAASTCPAPFSSTGARHHGLCPLR 287
+S+ ++ P ST P P SS R CP++
Sbjct: 176 SSISSSSSTPPPSTSPVPTSSGSGRRKPRCPMK 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,402,030
Number of Sequences: 27780
Number of extensions: 227501
Number of successful extensions: 831
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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