BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021904X (430 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 0.83 DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 3.3 AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 21 5.8 AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 7.7 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 23.8 bits (49), Expect = 0.83 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +2 Query: 167 DSDLQLERINVYYNEASGGKYVPRAILVDWSPAPWTLSAP 286 D+ L+ I Y N+ GG++V I W+P + + P Sbjct: 72 DARLKFSNIAPYLNQIYGGQFVRDLI---WTPTVYVSNEP 108 >DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel protein. Length = 463 Score = 21.8 bits (44), Expect = 3.3 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -3 Query: 191 CAPTASQSPHGRHRWGRCRARQ 126 C+P Q+P R GR R R+ Sbjct: 392 CSPPPRQTPPSRKESGRRRRRR 413 >AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein ASP6 protein. Length = 146 Score = 21.0 bits (42), Expect = 5.8 Identities = 9/40 (22%), Positives = 21/40 (52%) Frame = -3 Query: 359 LAQLLPAPDCPKTKLSGRKICPKGPERTESMVPGSSRREW 240 +++ + + KT + RK+C K + + ++ G R E+ Sbjct: 23 MSKKMTIEEAKKTIKNLRKVCSKKNDTPKELLDGQFRGEF 62 >AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase protein. Length = 510 Score = 20.6 bits (41), Expect = 7.7 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = -2 Query: 339 AGLSEDEVVRTEDLSE 292 AGL+E+EVV + ++E Sbjct: 62 AGLTEEEVVLAKTIAE 77 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 126,478 Number of Sequences: 438 Number of extensions: 2653 Number of successful extensions: 6 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 11121030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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