Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021904X
(430 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 130 3e-31
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 128 2e-30
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 127 4e-30
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 127 4e-30
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 126 5e-30
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 126 6e-30
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 125 1e-29
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 125 1e-29
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 125 1e-29
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 67 4e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 67 4e-12
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 66 1e-11
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 66 1e-11
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 66 1e-11
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 66 1e-11
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 66 1e-11
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 66 1e-11
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 65 2e-11
At4g37190.1 68417.m05265 expressed protein 32 0.19
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 30 0.58
At2g44070.1 68415.m05481 eukaryotic translation initiation facto... 29 1.3
At5g28295.1 68418.m03435 hypothetical protein 28 2.3
At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A... 28 3.1
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 3.1
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 3.1
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 4.1
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 4.1
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 5.4
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 27 5.4
At5g55690.1 68418.m06943 MADS-box protein (AGL47) 27 7.1
At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein 27 7.1
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 7.1
At1g18650.1 68414.m02325 glycosyl hydrolase family protein 17 si... 26 9.4
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 130 bits (315), Expect = 3e-31
Identities = 56/71 (78%), Positives = 65/71 (91%), Gaps = 1/71 (1%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 229
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 230 VPRAILVDWSP 262
VPRA+L+D P
Sbjct: 61 VPRAVLMDLEP 71
Score = 123 bits (297), Expect = 4e-29
Identities = 52/59 (88%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV+RKE+E+
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 128 bits (309), Expect = 2e-30
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 233 PRAILVDWSP 262
PRAIL+D P
Sbjct: 61 PRAILMDLEP 70
Score = 122 bits (295), Expect = 8e-29
Identities = 52/59 (88%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV+RKE+E+
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 126
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 127 bits (306), Expect = 4e-30
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 122 bits (293), Expect = 1e-28
Identities = 52/59 (88%), Positives = 58/59 (98%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+E+
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 127 bits (306), Expect = 4e-30
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 122 bits (293), Expect = 1e-28
Identities = 52/59 (88%), Positives = 58/59 (98%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+E+
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 126 bits (305), Expect = 5e-30
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
Score = 125 bits (301), Expect = 1e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+E+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 126 bits (304), Expect = 6e-30
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 229
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 230 VPRAILVDWSP 262
VPRA+L+D P
Sbjct: 61 VPRAVLMDLEP 71
Score = 124 bits (300), Expect = 2e-29
Identities = 53/59 (89%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV+RKE+E+
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAEN 127
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 125 bits (301), Expect = 1e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+E+
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Score = 121 bits (292), Expect = 2e-28
Identities = 50/70 (71%), Positives = 61/70 (87%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 125 bits (301), Expect = 1e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+E+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Score = 124 bits (299), Expect = 3e-29
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 125 bits (301), Expect = 1e-29
Identities = 54/59 (91%), Positives = 59/59 (100%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDV+RKE+E+
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEN 126
Score = 122 bits (293), Expect = 1e-28
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 232
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 233 PRAILVDWSP 262
PRA+L+D P
Sbjct: 61 PRAVLMDLEP 70
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 4e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 235
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 236 RAILVDWSP 262
RA+L+D P
Sbjct: 63 RALLIDLEP 71
Score = 43.2 bits (97), Expect = 8e-05
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+I +E++
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 67.3 bits (157), Expect = 4e-12
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +2
Query: 56 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 235
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 236 RAILVDWSP 262
RA+L+D P
Sbjct: 63 RALLIDLEP 71
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVIRKESE 426
LEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+I +E++
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 65.7 bits (153), Expect = 1e-11
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 226
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 65.7 bits (153), Expect = 1e-11
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 226
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD IRK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Score = 62.9 bits (146), Expect = 9e-11
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD IRK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Score = 62.9 bits (146), Expect = 9e-11
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD IRK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Score = 60.5 bits (140), Expect = 5e-10
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 65.7 bits (153), Expect = 1e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD IRK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Score = 60.5 bits (140), Expect = 5e-10
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 226
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ VD P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 226
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 227 YVPRAILVDWSP 262
+VPRA+ +D P
Sbjct: 61 HVPRAVFLDLEP 72
Score = 64.9 bits (151), Expect = 2e-11
Identities = 26/59 (44%), Positives = 42/59 (71%)
Frame = +1
Query: 253 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKESES 429
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADN 128
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.9 bits (69), Expect = 0.19
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 53 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 220
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 221 GKYVPRAILVDWSPAPWTLSA 283
Y PR + V+ A T+S+
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 30.3 bits (65), Expect = 0.58
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 417 FADYIEDRVNELSTLCVVSLGPVVAGAGLSEDEVVRTEDLSERSGADRVHGAGLQSTRMA 238
FAD IE+ + EL+ L V G + ++ AD++HG L+ TR +
Sbjct: 90 FADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQS 149
>At2g44070.1 68415.m05481 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|Q63186 Translation initiation factor eIF-2B delta
subunit (eIF-2B GDP-GTP exchange factor) {Rattus
norvegicus}; contains Pfam profile PF01008: Initiation
factor 2 subunit family
Length = 307
Score = 29.1 bits (62), Expect = 1.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 47 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNEASGG 223
YK E V L C N++G IS HG + +G ++ +L+ +N+ Y +A+
Sbjct: 213 YKFHEKVQLDYSICSNELGDP--NAISKVHGREDINYLNGLTNNAKLKFLNLMY-DATPS 269
Query: 224 KYVPRAILVDWSPAPWT 274
Y+ I+ D+ P T
Sbjct: 270 DYI-SMIITDYGMVPPT 285
>At5g28295.1 68418.m03435 hypothetical protein
Length = 131
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 319 SCPDGRSV--RKVRSGQSPWCRAPVDENGAG 233
S +GR + R++R G+ PW R ++EN G
Sbjct: 51 SVEEGRDLVRRRLRGGEPPWRRTTMEENDRG 81
>At3g48270.1 68416.m05268 cytochrome P450 71A26, putative (CYP71A26)
identical to Cytochrome P450 71A26 (SP:Q9STK7)
{Arabidopsis thaliana}
Length = 489
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 158 YHGDSDLQ--LERINVYYNEASGGKYVPRAILVDW 256
Y G++D + +ER+N S G YVP +DW
Sbjct: 189 YGGETDFKELMERLNKLLGTFSVGSYVPWLAWIDW 223
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 399 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 283
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -3
Query: 335 DCPK-TKLSGRKICPKGPERTESMV--PGSSRREW 240
DC + + S R CP GP R +S + PG SR+++
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQF 314
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 59 EIVHLQAGQCGNQIGAKFWEIISD 130
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -3
Query: 344 PAPDCPKTKLSGRKICPKGPERTESMVPGSSRREWRGART 225
PAP P L ICP G + M SR + G+ T
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 101 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 250
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 74 QAGQCGNQIGAKFWEIISDEHGIDPTGAYHG 166
QA G IG ++W IIS + G D T Y G
Sbjct: 678 QAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At5g55690.1 68418.m06943 MADS-box protein (AGL47)
Length = 277
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 396 RVNELSTLCVVSLGPVVAGAGLSEDEVVRTEDLSERSGA 280
+ +E STLC V +V G + DE+V +L + G+
Sbjct: 31 KASEFSTLCGVDTCVIVYGPSRAGDEMVMEPELWPKDGS 69
>At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein
Length = 549
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 171 LTCSWSASMYTTMKPPAASTCPAPFSSTG 257
+ C +S + T P+ STCP P G
Sbjct: 420 VVCDFSGTGIVTSTNPSTSTCPIPIGEGG 448
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 153 PVGSMPCSSEMISQNLAPIW 94
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
>At1g18650.1 68414.m02325 glycosyl hydrolase family protein 17
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]; C-terminal homology only
Length = 184
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 174 TCSWSASMYTTMKPPAASTCPAPFSSTGA 260
TC ++ + + P+ +TCP P S++G+
Sbjct: 83 TCDFAGTATFSASDPSYTTCPFPASASGS 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,892,496
Number of Sequences: 28952
Number of extensions: 218155
Number of successful extensions: 679
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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