Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021903
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142946-1|AAI42947.1| 457|Homo sapiens RCC2 protein protein. 48 3e-05
BC053908-1|AAH53908.1| 522|Homo sapiens RCC2 protein protein. 48 3e-05
BC042141-1|AAH42141.1| 522|Homo sapiens regulator of chromosome... 48 3e-05
AJ421269-1|CAD13148.1| 522|Homo sapiens RCC1-like protein protein. 48 3e-05
AB040903-1|BAA95994.1| 564|Homo sapiens KIAA1470 protein protein. 48 3e-05
AL359612-1|CAB94882.1| 333|Homo sapiens hypothetical protein pr... 37 0.039
BC113826-1|AAI13827.1| 244|Homo sapiens RCCD1 protein protein. 31 1.9
D25215-1|BAA04945.2| 1054|Homo sapiens KIAA0032 protein. 31 2.5
BC038960-1|AAH38960.1| 368|Homo sapiens HERC3 protein protein. 31 2.5
AC098582-1|AAY41038.1| 382|Homo sapiens unknown protein. 31 2.5
BC113705-1|AAI13706.1| 692|Homo sapiens NIMA (never in mitosis ... 30 4.4
BC112240-1|AAI12241.1| 692|Homo sapiens NIMA-related kinase 8 p... 30 4.4
AY267371-1|AAP04006.1| 692|Homo sapiens NIMA-family kinase NEK8... 30 4.4
AY242354-1|AAO88243.1| 692|Homo sapiens NIMA-related kinase 12a... 30 4.4
AY292862-1|AAP44113.1| 278|Homo sapiens testis-specific protein... 30 5.8
BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4 p... 29 7.7
AY650034-1|AAV66580.1| 110|Homo sapiens HECT and RCC1 containin... 29 7.7
AY650033-1|AAV66579.1| 979|Homo sapiens HECT and RCC1 containin... 29 7.7
AY650032-1|AAV66578.1| 117|Homo sapiens HECT and RCC1 containin... 29 7.7
AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containin... 29 7.7
AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4 p... 29 7.7
AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4 p... 29 7.7
>BC142946-1|AAI42947.1| 457|Homo sapiens RCC2 protein protein.
Length = 457
Score = 47.6 bits (108), Expect = 3e-05
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Frame = +3
Query: 285 KTPGVLMIAGLVSWDLTAR----RDNNPTKRTHPNLYTFHKF---TDRRYRLIVSGCTAG 443
K G L+I G +WDL R R + NL+ H++ R R +VSG A
Sbjct: 36 KCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAA 95
Query: 444 HSVLVSEEGEAYTFCRNACGQL 509
HS+L++ EG+ +++ RN GQL
Sbjct: 96 HSLLITTEGKLWSWGRNEKGQL 117
>BC053908-1|AAH53908.1| 522|Homo sapiens RCC2 protein protein.
Length = 522
Score = 47.6 bits (108), Expect = 3e-05
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +3
Query: 285 KTPGVLMIAGLVSWDLTARRDNNPTKRTH----PNLYTFHKF---TDRRYRLIVSGCTAG 443
K G L+I G +WDL R++ + + NL+ H++ R R +VSG A
Sbjct: 101 KCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAA 160
Query: 444 HSVLVSEEGEAYTFCRNACGQL 509
HS+L++ EG+ +++ RN GQL
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQL 182
>BC042141-1|AAH42141.1| 522|Homo sapiens regulator of chromosome
condensation 2 protein.
Length = 522
Score = 47.6 bits (108), Expect = 3e-05
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +3
Query: 285 KTPGVLMIAGLVSWDLTARRDNNPTKRTH----PNLYTFHKF---TDRRYRLIVSGCTAG 443
K G L+I G +WDL R++ + + NL+ H++ R R +VSG A
Sbjct: 101 KCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAA 160
Query: 444 HSVLVSEEGEAYTFCRNACGQL 509
HS+L++ EG+ +++ RN GQL
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQL 182
>AJ421269-1|CAD13148.1| 522|Homo sapiens RCC1-like protein protein.
Length = 522
Score = 47.6 bits (108), Expect = 3e-05
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +3
Query: 285 KTPGVLMIAGLVSWDLTARRDNNPTKRTH----PNLYTFHKF---TDRRYRLIVSGCTAG 443
K G L+I G +WDL R++ + + NL+ H++ R R +VSG A
Sbjct: 101 KCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAA 160
Query: 444 HSVLVSEEGEAYTFCRNACGQL 509
HS+L++ EG+ +++ RN GQL
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQL 182
>AB040903-1|BAA95994.1| 564|Homo sapiens KIAA1470 protein protein.
Length = 564
Score = 47.6 bits (108), Expect = 3e-05
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +3
Query: 285 KTPGVLMIAGLVSWDLTARRDNNPTKRTH----PNLYTFHKF---TDRRYRLIVSGCTAG 443
K G L+I G +WDL R++ + + NL+ H++ R R +VSG A
Sbjct: 143 KCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAA 202
Query: 444 HSVLVSEEGEAYTFCRNACGQL 509
HS+L++ EG+ +++ RN GQL
Sbjct: 203 HSLLITTEGKLWSWGRNEKGQL 224
>AL359612-1|CAB94882.1| 333|Homo sapiens hypothetical protein
protein.
Length = 333
Score = 37.1 bits (82), Expect = 0.039
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 399 TDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQL 509
T R R +VSG A HS+L++ EG+ +++ RN GQL
Sbjct: 2 TRGRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQL 38
>BC113826-1|AAI13827.1| 244|Homo sapiens RCCD1 protein protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.9
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 LIVSGCTAG--HSVLVSEEGEAYTFCRNACGQLASETR 524
L+++ AG HSV VSE G+ Y + N GQLA TR
Sbjct: 78 LVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTR 115
>D25215-1|BAA04945.2| 1054|Homo sapiens KIAA0032 protein.
Length = 1054
Score = 31.1 bits (67), Expect = 2.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 432 CTAGHSVLVSEEGEAYTFCRNACGQLASE 518
C HSV + E+GE YT N GQL E
Sbjct: 45 CGGNHSVFLLEDGEVYTCGLNTKGQLGHE 73
Score = 29.9 bits (64), Expect = 5.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 405 RRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASET 521
R +++ C H+ ++++ G +TF +CGQL ++
Sbjct: 244 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS 282
>BC038960-1|AAH38960.1| 368|Homo sapiens HERC3 protein protein.
Length = 368
Score = 31.1 bits (67), Expect = 2.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 432 CTAGHSVLVSEEGEAYTFCRNACGQLASE 518
C HSV + E+GE YT N GQL E
Sbjct: 41 CGGNHSVFLLEDGEVYTCGLNTKGQLGHE 69
Score = 29.9 bits (64), Expect = 5.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 405 RRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASET 521
R +++ C H+ ++++ G +TF +CGQL ++
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS 278
>AC098582-1|AAY41038.1| 382|Homo sapiens unknown protein.
Length = 382
Score = 31.1 bits (67), Expect = 2.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 432 CTAGHSVLVSEEGEAYTFCRNACGQLASE 518
C HSV + E+GE YT N GQL E
Sbjct: 41 CGGNHSVFLLEDGEVYTCGLNTKGQLGHE 69
Score = 29.9 bits (64), Expect = 5.8
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 405 RRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASET 521
R +++ C H+ ++++ G +TF +CGQL ++
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDS 278
>BC113705-1|AAI13706.1| 692|Homo sapiens NIMA (never in mitosis
gene a)- related kinase 8 protein.
Length = 692
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 444 HSVLVSEEGEAYTFCRNACGQLASETR 524
HS V+ G+ YTF N GQL + TR
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTR 598
>BC112240-1|AAI12241.1| 692|Homo sapiens NIMA-related kinase 8
protein.
Length = 692
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 444 HSVLVSEEGEAYTFCRNACGQLASETR 524
HS V+ G+ YTF N GQL + TR
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTR 598
>AY267371-1|AAP04006.1| 692|Homo sapiens NIMA-family kinase NEK8
protein.
Length = 692
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 444 HSVLVSEEGEAYTFCRNACGQLASETR 524
HS V+ G+ YTF N GQL + TR
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTR 598
>AY242354-1|AAO88243.1| 692|Homo sapiens NIMA-related kinase 12a
protein.
Length = 692
Score = 30.3 bits (65), Expect = 4.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 444 HSVLVSEEGEAYTFCRNACGQLASETR 524
HS V+ G+ YTF N GQL + TR
Sbjct: 572 HSAAVTASGDCYTFGSNQHGQLGTNTR 598
>AY292862-1|AAP44113.1| 278|Homo sapiens testis-specific protein
TPX1 c isoform protein.
Length = 278
Score = 29.9 bits (64), Expect = 5.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 95 VSVHCQVLVTVERSQEGRNLWSLKMRIVMIQLLPIHQLNSQNLQHRSLKNVP 250
V +C + T +EG N+W +R+ QLL QL + + + + KN P
Sbjct: 166 VCQYCPAMKTYLNKREGINVWKCFLRLRHFQLLRGEQLLTFSGNNMNRKNTP 217
>BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
>AY650034-1|AAV66580.1| 110|Homo sapiens HECT and RCC1 containing
protein 4 isoform 4 protein.
Length = 110
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
>AY650033-1|AAV66579.1| 979|Homo sapiens HECT and RCC1 containing
protein 4 isoform 3 protein.
Length = 979
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
>AY650032-1|AAV66578.1| 117|Homo sapiens HECT and RCC1 containing
protein 4 isoform 2 protein.
Length = 117
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
>AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containing
protein 4 isoform 1 protein.
Length = 1057
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
>AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
>AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 7.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 396 FTDRRYRLIVSGCTAGHSVLVSEEGEAYTFCRNACGQLASE 518
F ++R R + GC H+V V ++G YT N GQL E
Sbjct: 31 FINKRVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGHE 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,316,146
Number of Sequences: 237096
Number of extensions: 1790960
Number of successful extensions: 3653
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3653
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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