BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021902
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.0
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 5.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 5.6
AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding pr... 21 5.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.3
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 21 9.7
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.7
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.7
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 9.7
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 9.7
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 9.7
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 9.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR CS E S + YR +
Sbjct: 266 RTSRKRYSCSREREQKSYKNENSYRKYRET 295
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 319 NKTSRKRIHCSSNSEPNSILRMS 387
N+ + CS S+PN+++++S
Sbjct: 95 NEADQLLAECSPISDPNALIKIS 117
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -2
Query: 195 GGRLLDRELEFRVHRRHADVH 133
G R + L R+HR VH
Sbjct: 295 GSRFDEERLTLRIHRGRGSVH 315
>AB083010-1|BAC54131.1| 132|Apis mellifera fatty acid binding
protein protein.
Length = 132
Score = 21.4 bits (43), Expect = 5.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 281 ALGVGVLKTKNHTSRRPIVFTT 216
ALGVG++ K +S P+V T
Sbjct: 23 ALGVGIMTRKVGSSVSPVVELT 44
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 7.3
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEKEYRKYRET 62
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 20.6 bits (41), Expect = 9.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 51 ILYTKCL*SYPLCVCD 98
+L+T C+ SY + CD
Sbjct: 7 LLFTLCIVSYMMVRCD 22
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYR 405
+TSRKR S E NS YR
Sbjct: 33 RTSRKRYSRSREREQNSYKNEKEYRKYR 60
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYR 405
+TSRKR S E NS YR
Sbjct: 33 RTSRKRYSRSREREQNSYKNEKEYRKYR 60
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 33 RTSRKRYSRSREREQNSYKNEREYRKYRET 62
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 255 RTSRKRYSRSREREQNSYKNEREYRKYRET 284
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 255 RTSRKRYSRSREREQNSYKNEREYRKYRET 284
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 9.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 322 KTSRKRIHCSSNSEPNSILRMSPMSSYRRS 411
+TSRKR S E NS YR +
Sbjct: 266 RTSRKRYSRSREREQNSYKNEREYRKYRET 295
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,695
Number of Sequences: 438
Number of extensions: 2691
Number of successful extensions: 27
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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