Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021901
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.65 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   4.6  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -1

Query: 381 KLYTFNTKRRNILYLVCLTGMNVCF 307
           +LY+FNT  + ++++V L+G +  F
Sbjct: 71  QLYSFNTFAKLLIFVVSLSGNSAVF 95



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 381 KLYTFNTKRRNILYLVCLTG 322
           KLY FNT  + ++ +V L+G
Sbjct: 353 KLYNFNTFAKLLILVVSLSG 372


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 217 YIDVCSLETSSLFFLPFNSTYSSNAF*C 300
           Y D  ++ TSS    P   TYS N+  C
Sbjct: 7   YSDSTTMATSSNAMSPMTPTYSMNSMSC 34


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 65  VCSEIWSDQRLGLRP 21
           +C EIW      LRP
Sbjct: 226 ICIEIWQSSESSLRP 240


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 133 KLKRSHDPQQLGSDGEEESKTR 198
           K ++ HDP QL    EE  K R
Sbjct: 354 KRQKYHDPSQLLRHVEESDKQR 375


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,754
Number of Sequences: 336
Number of extensions: 2559
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)