Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021898
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.28 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.6  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   7.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 367 CCSYIFFCFNTLIAFCLTEF 308
           CC++IFF  + L   CL  F
Sbjct: 183 CCAFIFFNMHLLFLLCLDYF 202


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 257 FVSSFWTFCSILSARPSTFLM 195
           F +  WTFC ++ A  +T+L+
Sbjct: 347 FFNLDWTFCHMMIAALTTYLV 367


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 376 LSSCCSYIFFCFNTL 332
           L SCCS IF C   L
Sbjct: 98  LLSCCSVIFGCIFAL 112


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 376 LSSCCSYIFFCFNTL 332
           L SCCS IF C   L
Sbjct: 98  LLSCCSVIFGCIFAL 112


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 338 YSHCFLLD*IFSRTLPHFAHLILVFSK-FVSSFWTFCSI 225
           +  CFLLD I  R     A  I  FS+  V   +  C +
Sbjct: 87  FEDCFLLDGILERRSNDIAGSIEEFSRERVEDAYAICEL 125


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 338 YSHCFLLD*IFSRTLPHFAHLILVFSK-FVSSFWTFCSI 225
           +  CFLLD I  R     A  I  FS+  V   +  C +
Sbjct: 320 FEDCFLLDGILERRSNDIAGSIEEFSRERVEDAYAICEL 358


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -2

Query: 338 YSHCFLLD*IFSRTLPHFAHLILVFSK-FVSSFWTFCSI 225
           +  CFLLD I  R     A  I  FS+  V   +  C +
Sbjct: 320 FEDCFLLDGILERRSNDIAGSIEEFSRERVEDAYAICEL 358


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,742
Number of Sequences: 336
Number of extensions: 2703
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)