Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021898
(600 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50231| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 30 1.2
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 29 2.2
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 29 2.9
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 2.9
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 29 3.8
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 29 3.8
SB_12093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 28 5.0
SB_58659| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_34646| Best HMM Match : DUF1233 (HMM E-Value=3) 28 6.6
SB_20381| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_9880| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 28 6.6
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 6.6
SB_43160| Best HMM Match : Occludin_ELL (HMM E-Value=8.4) 28 6.6
SB_39078| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_6394| Best HMM Match : FlaC_arch (HMM E-Value=0.77) 28 6.6
SB_47165| Best HMM Match : MIT (HMM E-Value=7.4) 27 8.8
SB_47506| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_50231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 465 PSXQILWYECPSMSALHNLLVP 400
PS + WY+CPS LH+ P
Sbjct: 189 PSVMLSWYDCPSYQTLHHRYYP 210
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 252 HELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410
HE+++ + Q +KM SV +K K+K+ YE QL+NL+ + F++ A
Sbjct: 1967 HEIKETQKQNNKMSS--FDESVIKKLQ---KEKQEYENQLNNLQGELFSLRSA 2014
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 255 ELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQ 389
+L++ QM G A + V+ + +V ++ YEQQL+N RA+
Sbjct: 778 KLKEENGQMKSTVSGLASD-VEMQRNKVKTLREQYEQQLENTRAK 821
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 258 LRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLR-AQSFNMEQANYATQTLK 434
L K +DQ +MR+ ++ K KA + +K+++ + +N R +Q QA+ A Q K
Sbjct: 728 LEKERDQRERMRDQSTESEAKLKAQLDQQLRKIHDLERENSRVSQELKNAQAHIA-QKQK 786
Query: 435 DTHT--TISAMKDGVTQMKKE 491
+ T IS +++ K +
Sbjct: 787 ELQTCERISELEENKADTKSK 807
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/80 (21%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 HELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA-NYATQT 428
HEL +Y+D++++ + + + V++ K + + + L ++EQ QT
Sbjct: 1388 HELEEYQDKLAESER--LRKLAQTELEGVMESKDDFGKNVHELEKAKRSLEQQLAEMKQT 1445
Query: 429 LKDTHTTISAMKDGVTQMKK 488
+++ + +DG+ Q+KK
Sbjct: 1446 MEELEDELQVKEDGLRQLKK 1465
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 596 YHIACRGLLELHQLVPSYQLTHHLHHQWNHINLLKFFFHL 477
Y CRGL E H+L+ S+Q+ + +N+ ++ F L
Sbjct: 3008 YKYTCRGLFERHKLLFSFQMCSKILEAAGKLNMDEYNFFL 3047
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 545 YQLTHHLHHQWNHINLLKFFFHLCYTIL 462
+ L HH HH W+H +L+ H +T +
Sbjct: 176 HHLLHHHHHHWHHHHLIIRHHHHSFTTI 203
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 306 KNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYAT-QTLKDTHTTISAMKDGVTQM 482
+N+ +KA + L+Q+K ++LD+ +EQ + AT +K I +K+ + +
Sbjct: 987 RNAQLEKATKSLQQRKKRAEELDS------RLEQLDKATADAIKQRDLEICTLKETIEDL 1040
Query: 483 KKE 491
KKE
Sbjct: 1041 KKE 1043
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 255 ELRKYKDQMSKMREGPAKNSVKQKAM--RVLKQKKMYEQQLDNLRAQSFNMEQA-NYATQ 425
EL K ++ K +G + K +A V KQK +QQ+DNLR ++A N +
Sbjct: 526 ELDKAHRELQKESKGGSLKISKYEAQINNVTKQKNALKQQVDNLREDLKKSKEAQNLLQR 585
Query: 426 TLKDTHTTISAMKDGVTQMKKEFKKINMI 512
+ + + ++ ++ ++ K+ +
Sbjct: 586 EVLENRKDLDLFREELSAKNQQLDKLENV 614
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 383 CPVFQHGTSKLCNADIEGHSYHNICXEGWCNTNEKR 490
C + HG S+LCN + G Y+ C G+ N+ R
Sbjct: 331 CTMTSHGCSQLCNNTLGG--YNCYCLSGYSLGNDNR 364
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 596 YHIACRGLLELHQLVPSYQLT 534
Y+ AC GL E H+L+ S+Q+T
Sbjct: 1768 YNYACTGLFERHKLLFSFQMT 1788
>SB_12093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 403 SMLKDWARRLSSCCSYIFFCFNTLIAFCLTEFL 305
S L+DW+ RL C+ + A C+T FL
Sbjct: 6 SALRDWSERLRYLSMLHVSCYKQIYAACMTVFL 38
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 403 SMLKDWARRLSSCCSYIFFCFNTLIAFCLTEFL 305
S L+DW+ RL C+ + A C+T FL
Sbjct: 100 SALRDWSERLRYLSMLHVSCYKQIYAACMTVFL 132
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 255 ELRKYKDQMSKMREGPAKNSVK-QKAMRVLK-----QKKMYEQQLDNLRAQSFNMEQANY 416
EL K + +K E K S K +K + LK Q ++ E+Q D L + +E
Sbjct: 202 ELEKELKEKTKSAEKLVKASEKREKEVDALKRALQDQDQVMEEQQDALTERQLGIESLTE 261
Query: 417 ATQTLKDTHTTISAMKDGVTQMK 485
+TL+D +T+ +++ + +++
Sbjct: 262 ELRTLRDQNTSTNSLSAEIRRLE 284
>SB_58659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 31 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 71
>SB_34646| Best HMM Match : DUF1233 (HMM E-Value=3)
Length = 209
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 31 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 71
>SB_20381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 491 FFFHLCYTILHXRYCGM-SVLQCLRC 417
F F +CY + H RY M +L LRC
Sbjct: 15 FAFSICYDVSHSRYFTMFRILDILRC 40
>SB_9880| Best HMM Match : FlaC_arch (HMM E-Value=0.77)
Length = 272
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 31 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 71
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/90 (24%), Positives = 35/90 (38%)
Frame = +3
Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410
TE + G KY+ S E K K LK + EQQ L+ + E
Sbjct: 562 TEHFDGGSGNNKYEALKSDFEEERLKEYAKWSTKMALKNAQSLEQQRAELQFE-HEKEME 620
Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKK 500
+ ++ KD T + + M++E +K
Sbjct: 621 VFREESQKDYEMTALRLSSQIEAMEEEQRK 650
>SB_43160| Best HMM Match : Occludin_ELL (HMM E-Value=8.4)
Length = 116
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 31 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 71
>SB_39078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 9 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 49
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/61 (19%), Positives = 33/61 (54%)
Frame = +3
Query: 315 VKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEF 494
+K++ +K+K+ EQ+L + +++ Y + D TT++ ++ + Q+K ++
Sbjct: 190 IKKELENKIKKKEPEEQKLKEEIEEK--VQELRYLRSQVTDAQTTVAVIRSELAQLKNDY 247
Query: 495 K 497
+
Sbjct: 248 E 248
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 214 RADNIEQKVQKLDTNLENTRIR*AK*GRVLLKIQSSKKQ*E 336
+A KV+++D LEN R A GR+++++ K + E
Sbjct: 3112 KAREFNDKVREIDAFLENARDELASAGRIVVRLADDKNKDE 3152
>SB_11828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 31 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 71
>SB_6394| Best HMM Match : FlaC_arch (HMM E-Value=0.77)
Length = 149
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 464 GWCNTNEKRI*ED*YDSIDDVNDELADMMEQADEVQEALGRQ 589
G C++ + RI E+ + + ++ LAD++++ D +++ LG++
Sbjct: 31 GLCDSRDSRI-EELENQLSELKHRLADVVKERDGMRKELGKE 71
>SB_47165| Best HMM Match : MIT (HMM E-Value=7.4)
Length = 192
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 288 MREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKD 467
+++G + KQ V +QKKMYE+ + ME+ A+++++ T +KD
Sbjct: 48 LQKGEIYDVEKQYKELVEEQKKMYEKCWSKVLHYLLEMEKPGAASKSVEAT----MKLKD 103
Query: 468 GVTQM-KKEFKKIN 506
QM K +FK N
Sbjct: 104 KQRQMIKDKFKGFN 117
>SB_47506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +3
Query: 276 QMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFN-----MEQANYATQTLKDT 440
+ + +RE N +Q+ V K K EQQ L+ + N +++ N + ++D
Sbjct: 14 EANMLREEDRHNFKRQEENLVSKSKSQLEQQRLQLQREHSNEMEKMLDKTNSRLKHMEDE 73
Query: 441 HTTISA-MKDGVTQMKKEFKKI 503
+ T SA ++ V ++ E KK+
Sbjct: 74 YATRSATAQETVRTLEGEIKKL 95
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,893,736
Number of Sequences: 59808
Number of extensions: 321851
Number of successful extensions: 1014
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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