BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021898 (600 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 28 0.20 AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 3.3 U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 4.3 U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 4.3 AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 23 5.7 CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 7.5 AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 10.0 AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 10.0 AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 23 10.0 >AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. Length = 615 Score = 28.3 bits (60), Expect = 0.20 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Frame = +3 Query: 258 LRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQ------QLDNLRAQSFNMEQANYA 419 ++K +D + K + GP K VLK ++M Q QL +R QS + + + A Sbjct: 168 IQKAEDLIQKDKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQA 227 Query: 420 TQTLKDTHTTISAMKDGVTQMKKEFKK 500 LK + + K+E K+ Sbjct: 228 NHWLKSHGDRLLEDRQRFDNYKRELKE 254 >AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. Length = 1229 Score = 24.2 bits (50), Expect = 3.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 261 RKYKDQMSKMREGPAKNSVKQKAMRVLKQKK 353 R +DQ+SK +E K++A VLK+KK Sbjct: 247 RLKEDQISKQQELNIIEKRKEEADEVLKEKK 277 Score = 22.6 bits (46), Expect = 10.0 Identities = 21/124 (16%), Positives = 51/124 (41%) Frame = +3 Query: 132 KHEQIIRKSETQRTWPQHYGLH*KRRWPSR*Y*TESPETGHELRKYKDQMSKMREGPAKN 311 KHE + + ETQ T+ + G+ +R+ E+ E +Y + E Sbjct: 182 KHEMQMAEEETQFTYQKKRGIAAERK--------EARLEKQEADRYASLKQECSEKQVHF 233 Query: 312 SVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKE 491 + + + K++ E Q+ + + ++ A + LK+ + M + + ++E Sbjct: 234 QLFKLYHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQE 293 Query: 492 FKKI 503 +++ Sbjct: 294 IREV 297 >U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. Length = 596 Score = 23.8 bits (49), Expect = 4.3 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -2 Query: 563 HQLVPSYQLTHHLHHQ 516 HQ +QL HH HHQ Sbjct: 95 HQHPHHHQLPHHPHHQ 110 >U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. Length = 596 Score = 23.8 bits (49), Expect = 4.3 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = -2 Query: 563 HQLVPSYQLTHHLHHQ 516 HQ +QL HH HHQ Sbjct: 95 HQHPHHHQLPHHPHHQ 110 >AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-binding protein OBPjj4 protein. Length = 204 Score = 23.4 bits (48), Expect = 5.7 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +3 Query: 444 TTISAMKDGVTQMKKEFKK 500 T + KDG TQ+K + KK Sbjct: 168 TNVWTQKDGCTQLKDKIKK 186 >CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal structural protein protein. Length = 1645 Score = 23.0 bits (47), Expect = 7.5 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +3 Query: 258 LRKYKDQMSKMREGPAK--NSVKQKAMRVLKQKKMYEQQLDNL 380 L Y Q + ++ A + KQK + KQ K + QLD L Sbjct: 379 LPSYTQQQQQQQQSAAAPPSYWKQKKLPTKKQHKQLQAQLDKL 421 >AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific doublesex protein protein. Length = 241 Score = 22.6 bits (46), Expect = 10.0 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = -2 Query: 461 HXRYCGMSVLQCLRCII 411 H RYC QC +C + Sbjct: 56 HKRYCKYRACQCEKCCL 72 >AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doublesex protein protein. Length = 283 Score = 22.6 bits (46), Expect = 10.0 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = -2 Query: 461 HXRYCGMSVLQCLRCII 411 H RYC QC +C + Sbjct: 56 HKRYCKYRACQCEKCCL 72 >AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin GPCR protein. Length = 634 Score = 22.6 bits (46), Expect = 10.0 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = -2 Query: 212 PSTFLMQSVMLGPGSLGFALPNNL 141 P+ ++ GPGSL + PN++ Sbjct: 19 PTELTQYDLLFGPGSLLYRPPNSM 42 Score = 22.6 bits (46), Expect = 10.0 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = -3 Query: 376 LSSCCSYIFFCF 341 +SSCC+ I +CF Sbjct: 514 ISSCCNPITYCF 525 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 588,031 Number of Sequences: 2352 Number of extensions: 11607 Number of successful extensions: 38 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 38 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 58029966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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