Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021898
(600 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 28 0.20
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 3.3
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 24 4.3
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 24 4.3
AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 23 5.7
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 7.5
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 10.0
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 10.0
AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakini... 23 10.0
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 28.3 bits (60), Expect = 0.20
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = +3
Query: 258 LRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQ------QLDNLRAQSFNMEQANYA 419
++K +D + K + GP K VLK ++M Q QL +R QS + + + A
Sbjct: 168 IQKAEDLIQKDKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQA 227
Query: 420 TQTLKDTHTTISAMKDGVTQMKKEFKK 500
LK + + K+E K+
Sbjct: 228 NHWLKSHGDRLLEDRQRFDNYKRELKE 254
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.2 bits (50), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 261 RKYKDQMSKMREGPAKNSVKQKAMRVLKQKK 353
R +DQ+SK +E K++A VLK+KK
Sbjct: 247 RLKEDQISKQQELNIIEKRKEEADEVLKEKK 277
Score = 22.6 bits (46), Expect = 10.0
Identities = 21/124 (16%), Positives = 51/124 (41%)
Frame = +3
Query: 132 KHEQIIRKSETQRTWPQHYGLH*KRRWPSR*Y*TESPETGHELRKYKDQMSKMREGPAKN 311
KHE + + ETQ T+ + G+ +R+ E+ E +Y + E
Sbjct: 182 KHEMQMAEEETQFTYQKKRGIAAERK--------EARLEKQEADRYASLKQECSEKQVHF 233
Query: 312 SVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKE 491
+ + + K++ E Q+ + + ++ A + LK+ + M + + ++E
Sbjct: 234 QLFKLYHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQE 293
Query: 492 FKKI 503
+++
Sbjct: 294 IREV 297
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 4.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 563 HQLVPSYQLTHHLHHQ 516
HQ +QL HH HHQ
Sbjct: 95 HQHPHHHQLPHHPHHQ 110
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 23.8 bits (49), Expect = 4.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 563 HQLVPSYQLTHHLHHQ 516
HQ +QL HH HHQ
Sbjct: 95 HQHPHHHQLPHHPHHQ 110
>AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative
odorant-binding protein OBPjj4 protein.
Length = 204
Score = 23.4 bits (48), Expect = 5.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 444 TTISAMKDGVTQMKKEFKK 500
T + KDG TQ+K + KK
Sbjct: 168 TNVWTQKDGCTQLKDKIKK 186
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 7.5
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 258 LRKYKDQMSKMREGPAK--NSVKQKAMRVLKQKKMYEQQLDNL 380
L Y Q + ++ A + KQK + KQ K + QLD L
Sbjct: 379 LPSYTQQQQQQQQSAAAPPSYWKQKKLPTKKQHKQLQAQLDKL 421
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 22.6 bits (46), Expect = 10.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 461 HXRYCGMSVLQCLRCII 411
H RYC QC +C +
Sbjct: 56 HKRYCKYRACQCEKCCL 72
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 22.6 bits (46), Expect = 10.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 461 HXRYCGMSVLQCLRCII 411
H RYC QC +C +
Sbjct: 56 HKRYCKYRACQCEKCCL 72
>AY347952-1|AAR28375.1| 634|Anopheles gambiae putative sulfakinin
GPCR protein.
Length = 634
Score = 22.6 bits (46), Expect = 10.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 212 PSTFLMQSVMLGPGSLGFALPNNL 141
P+ ++ GPGSL + PN++
Sbjct: 19 PTELTQYDLLFGPGSLLYRPPNSM 42
Score = 22.6 bits (46), Expect = 10.0
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 376 LSSCCSYIFFCF 341
+SSCC+ I +CF
Sbjct: 514 ISSCCNPITYCF 525
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,031
Number of Sequences: 2352
Number of extensions: 11607
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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