BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021898 (600 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF016448-6|AAB65951.1| 217|Caenorhabditis elegans Hypothetical ... 116 2e-26 Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 35 0.039 Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 35 0.039 J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 35 0.039 Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.1 Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 30 1.1 Z92777-7|CAI79120.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.3 Z92777-2|CAB07167.1| 387|Caenorhabditis elegans Hypothetical pr... 28 4.4 AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 28 4.4 Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 28 5.9 U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical pr... 28 5.9 AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 27 7.7 AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 27 7.7 >AF016448-6|AAB65951.1| 217|Caenorhabditis elegans Hypothetical protein F41E6.9 protein. Length = 217 Score = 116 bits (278), Expect = 2e-26 Identities = 51/85 (60%), Positives = 69/85 (81%) Frame = +3 Query: 255 ELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLK 434 +L K +DQMSKMREGP+KN +KQKA+RVLKQK+MYE Q L Q+FNM+Q+N+A Q +K Sbjct: 40 DLMKLRDQMSKMREGPSKNLIKQKALRVLKQKRMYENQKGQLDQQAFNMDQSNFAIQGMK 99 Query: 435 DTHTTISAMKDGVTQMKKEFKKINM 509 D T++AMKDG+ M+KE+KK+N+ Sbjct: 100 DNQVTVAAMKDGLKTMQKEYKKMNI 124 Score = 48.8 bits (111), Expect = 3e-06 Identities = 22/46 (47%), Positives = 32/46 (69%) Frame = +1 Query: 136 MNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTNLENTR 273 MNR+FG K K P P + + I NV+ R+D+I++K+QKLD +L R Sbjct: 1 MNRIFGTGK-KVPPPDLNNAISNVESRSDSIDKKIQKLDQDLMKLR 45 Score = 37.5 bits (83), Expect = 0.007 Identities = 13/28 (46%), Positives = 22/28 (78%) Frame = +2 Query: 509 DSIDDVNDELADMMEQADEVQEALGRQY 592 D I+D+ D++ DM++ +E+QEA+ RQY Sbjct: 125 DQIEDLQDQMEDMLDMNNEIQEAMSRQY 152 >Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 35.1 bits (77), Expect = 0.039 Identities = 21/91 (23%), Positives = 42/91 (46%) Frame = +3 Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410 +E H++R +D+M + E AK + ++K + +K M + Q + + N +A Sbjct: 975 SEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKA 1034 Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKKI 503 QTL D ++ K + K+ +K+ Sbjct: 1035 K-LEQTLDDLEDSLEREKRARADLDKQKRKV 1064 >Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 35.1 bits (77), Expect = 0.039 Identities = 21/91 (23%), Positives = 42/91 (46%) Frame = +3 Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410 +E H++R +D+M + E AK + ++K + +K M + Q + + N +A Sbjct: 975 SEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKA 1034 Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKKI 503 QTL D ++ K + K+ +K+ Sbjct: 1035 K-LEQTLDDLEDSLEREKRARADLDKQKRKV 1064 >J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain protein. Length = 1966 Score = 35.1 bits (77), Expect = 0.039 Identities = 21/91 (23%), Positives = 42/91 (46%) Frame = +3 Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410 +E H++R +D+M + E AK + ++K + +K M + Q + + N +A Sbjct: 978 SEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKA 1037 Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKKI 503 QTL D ++ K + K+ +K+ Sbjct: 1038 K-LEQTLDDLEDSLEREKRARADLDKQKRKV 1067 >Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical protein K08E3.3b protein. Length = 610 Score = 30.3 bits (65), Expect = 1.1 Identities = 16/71 (22%), Positives = 37/71 (52%) Frame = +3 Query: 288 MREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKD 467 ++ P+KN + + + +LK+K+ E + ++ N +Q Y T K H +S ++ Sbjct: 312 LKSSPSKNRIIRNFLGILKEKEADE------KPEASNNDQLMY-TDKSKPAHVRLSCLRS 364 Query: 468 GVTQMKKEFKK 500 + M+K+ ++ Sbjct: 365 KIRDMEKQLEQ 375 >Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical protein K08E3.3a protein. Length = 608 Score = 30.3 bits (65), Expect = 1.1 Identities = 16/71 (22%), Positives = 37/71 (52%) Frame = +3 Query: 288 MREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKD 467 ++ P+KN + + + +LK+K+ E + ++ N +Q Y T K H +S ++ Sbjct: 312 LKSSPSKNRIIRNFLGILKEKEADE------KPEASNNDQLMY-TDKSKPAHVRLSCLRS 364 Query: 468 GVTQMKKEFKK 500 + M+K+ ++ Sbjct: 365 KIRDMEKQLEQ 375 >Z92777-7|CAI79120.1| 294|Caenorhabditis elegans Hypothetical protein C17H1.10 protein. Length = 294 Score = 28.7 bits (61), Expect = 3.3 Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 1/84 (1%) Frame = +3 Query: 264 KYKDQMSKMREGPAKNSVKQKA-MRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDT 440 ++ + M K+++ + +QK ++LK ++M + N+ M NYA L + Sbjct: 72 EHHETMEKLKQKKIEEIAQQKKEQQILKMEEMKAKSERNVMEHQIRMTNMNYAQNMLSNI 131 Query: 441 HTTISAMKDGVTQMKKEFKKINMI 512 + +++ + M+ K +N+I Sbjct: 132 ESGQASLA-VIKHMESCIKSVNVI 154 >Z92777-2|CAB07167.1| 387|Caenorhabditis elegans Hypothetical protein C17H1.3 protein. Length = 387 Score = 28.3 bits (60), Expect = 4.4 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = +3 Query: 243 ETGHELRKYKDQMSKM----REGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410 E G EL K+ +M KM E + VKQ A+++L+ K +++ + +EQA Sbjct: 152 ERGAELDKHHKKMLKMVEKSHEDCTREKVKQHALKMLEMKNEGQRKAIEHKIVMEKLEQA 211 Query: 411 NYATQTL 431 +Q L Sbjct: 212 RGMSQRL 218 >AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical protein Y48C3A.3 protein. Length = 321 Score = 28.3 bits (60), Expect = 4.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -1 Query: 237 FLFNIIGSAIYVFNAIRNAGARFFGFRSSE*SVHVWFKTLIELGK 103 FLF +IGS YV +R GF S E +++ + L + K Sbjct: 188 FLFKLIGSRTYVSALLRRITGSDIGFHSREDIINIGSEDLKAISK 232 >Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical protein C54G10.2 protein. Length = 839 Score = 27.9 bits (59), Expect = 5.9 Identities = 17/66 (25%), Positives = 30/66 (45%) Frame = +3 Query: 234 ESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQAN 413 ++PE E K K+ S +E P K S+ K + QKK + D + S + + Sbjct: 200 KTPEKRKETPKKKELPSVKKEFPKKQSIPVKKEKETPQKKALSVKKDPPKVTSESSSSSQ 259 Query: 414 YATQTL 431 +T ++ Sbjct: 260 VSTSSV 265 >U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical protein C06E4.8 protein. Length = 285 Score = 27.9 bits (59), Expect = 5.9 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = +3 Query: 300 PAKNSVKQKAMRVLKQKKMYEQQLDNLRAQ 389 P K ++ + ++ KQ+K YEQ + N+RA+ Sbjct: 35 PNKETIAELRRQIGKQRKHYEQLIKNVRAK 64 >AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical protein H06I04.3c protein. Length = 786 Score = 27.5 bits (58), Expect = 7.7 Identities = 15/56 (26%), Positives = 33/56 (58%) Frame = +3 Query: 225 Y*TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 392 Y ++P T ++ Y+++M + P+K + KA KQKKM +++L++ + ++ Sbjct: 677 YFKQTPVTKEQVALYRERMREFNARPSKKVAEAKAR---KQKKM-QRKLESAKKKA 728 >AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical protein H06I04.3a protein. Length = 833 Score = 27.5 bits (58), Expect = 7.7 Identities = 15/56 (26%), Positives = 33/56 (58%) Frame = +3 Query: 225 Y*TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 392 Y ++P T ++ Y+++M + P+K + KA KQKKM +++L++ + ++ Sbjct: 677 YFKQTPVTKEQVALYRERMREFNARPSKKVAEAKAR---KQKKM-QRKLESAKKKA 728 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,924,210 Number of Sequences: 27780 Number of extensions: 254969 Number of successful extensions: 921 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 847 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 921 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1279376318 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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