Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021898
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016448-6|AAB65951.1| 217|Caenorhabditis elegans Hypothetical ... 116 2e-26
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 35 0.039
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 35 0.039
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 35 0.039
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.1
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 30 1.1
Z92777-7|CAI79120.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92777-2|CAB07167.1| 387|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 28 4.4
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 27 7.7
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 27 7.7
>AF016448-6|AAB65951.1| 217|Caenorhabditis elegans Hypothetical
protein F41E6.9 protein.
Length = 217
Score = 116 bits (278), Expect = 2e-26
Identities = 51/85 (60%), Positives = 69/85 (81%)
Frame = +3
Query: 255 ELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLK 434
+L K +DQMSKMREGP+KN +KQKA+RVLKQK+MYE Q L Q+FNM+Q+N+A Q +K
Sbjct: 40 DLMKLRDQMSKMREGPSKNLIKQKALRVLKQKRMYENQKGQLDQQAFNMDQSNFAIQGMK 99
Query: 435 DTHTTISAMKDGVTQMKKEFKKINM 509
D T++AMKDG+ M+KE+KK+N+
Sbjct: 100 DNQVTVAAMKDGLKTMQKEYKKMNI 124
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +1
Query: 136 MNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTNLENTR 273
MNR+FG K K P P + + I NV+ R+D+I++K+QKLD +L R
Sbjct: 1 MNRIFGTGK-KVPPPDLNNAISNVESRSDSIDKKIQKLDQDLMKLR 45
Score = 37.5 bits (83), Expect = 0.007
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2
Query: 509 DSIDDVNDELADMMEQADEVQEALGRQY 592
D I+D+ D++ DM++ +E+QEA+ RQY
Sbjct: 125 DQIEDLQDQMEDMLDMNNEIQEAMSRQY 152
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +3
Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410
+E H++R +D+M + E AK + ++K + +K M + Q + + N +A
Sbjct: 975 SEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKA 1034
Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKKI 503
QTL D ++ K + K+ +K+
Sbjct: 1035 K-LEQTLDDLEDSLEREKRARADLDKQKRKV 1064
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +3
Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410
+E H++R +D+M + E AK + ++K + +K M + Q + + N +A
Sbjct: 975 SEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKA 1034
Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKKI 503
QTL D ++ K + K+ +K+
Sbjct: 1035 K-LEQTLDDLEDSLEREKRARADLDKQKRKV 1064
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +3
Query: 231 TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410
+E H++R +D+M + E AK + ++K + +K M + Q + + N +A
Sbjct: 978 SEKQSKDHQIRSLQDEMQQQDEAIAKLNKEKKHQEEINRKLMEDLQSEEDKGNHQNKVKA 1037
Query: 411 NYATQTLKDTHTTISAMKDGVTQMKKEFKKI 503
QTL D ++ K + K+ +K+
Sbjct: 1038 K-LEQTLDDLEDSLEREKRARADLDKQKRKV 1067
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +3
Query: 288 MREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKD 467
++ P+KN + + + +LK+K+ E + ++ N +Q Y T K H +S ++
Sbjct: 312 LKSSPSKNRIIRNFLGILKEKEADE------KPEASNNDQLMY-TDKSKPAHVRLSCLRS 364
Query: 468 GVTQMKKEFKK 500
+ M+K+ ++
Sbjct: 365 KIRDMEKQLEQ 375
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/71 (22%), Positives = 37/71 (52%)
Frame = +3
Query: 288 MREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKD 467
++ P+KN + + + +LK+K+ E + ++ N +Q Y T K H +S ++
Sbjct: 312 LKSSPSKNRIIRNFLGILKEKEADE------KPEASNNDQLMY-TDKSKPAHVRLSCLRS 364
Query: 468 GVTQMKKEFKK 500
+ M+K+ ++
Sbjct: 365 KIRDMEKQLEQ 375
>Z92777-7|CAI79120.1| 294|Caenorhabditis elegans Hypothetical
protein C17H1.10 protein.
Length = 294
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +3
Query: 264 KYKDQMSKMREGPAKNSVKQKA-MRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDT 440
++ + M K+++ + +QK ++LK ++M + N+ M NYA L +
Sbjct: 72 EHHETMEKLKQKKIEEIAQQKKEQQILKMEEMKAKSERNVMEHQIRMTNMNYAQNMLSNI 131
Query: 441 HTTISAMKDGVTQMKKEFKKINMI 512
+ +++ + M+ K +N+I
Sbjct: 132 ESGQASLA-VIKHMESCIKSVNVI 154
>Z92777-2|CAB07167.1| 387|Caenorhabditis elegans Hypothetical
protein C17H1.3 protein.
Length = 387
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 243 ETGHELRKYKDQMSKM----REGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 410
E G EL K+ +M KM E + VKQ A+++L+ K +++ + +EQA
Sbjct: 152 ERGAELDKHHKKMLKMVEKSHEDCTREKVKQHALKMLEMKNEGQRKAIEHKIVMEKLEQA 211
Query: 411 NYATQTL 431
+Q L
Sbjct: 212 RGMSQRL 218
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 237 FLFNIIGSAIYVFNAIRNAGARFFGFRSSE*SVHVWFKTLIELGK 103
FLF +IGS YV +R GF S E +++ + L + K
Sbjct: 188 FLFKLIGSRTYVSALLRRITGSDIGFHSREDIINIGSEDLKAISK 232
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +3
Query: 234 ESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQAN 413
++PE E K K+ S +E P K S+ K + QKK + D + S + +
Sbjct: 200 KTPEKRKETPKKKELPSVKKEFPKKQSIPVKKEKETPQKKALSVKKDPPKVTSESSSSSQ 259
Query: 414 YATQTL 431
+T ++
Sbjct: 260 VSTSSV 265
>U41277-8|AAA82479.1| 285|Caenorhabditis elegans Hypothetical
protein C06E4.8 protein.
Length = 285
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 300 PAKNSVKQKAMRVLKQKKMYEQQLDNLRAQ 389
P K ++ + ++ KQ+K YEQ + N+RA+
Sbjct: 35 PNKETIAELRRQIGKQRKHYEQLIKNVRAK 64
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +3
Query: 225 Y*TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 392
Y ++P T ++ Y+++M + P+K + KA KQKKM +++L++ + ++
Sbjct: 677 YFKQTPVTKEQVALYRERMREFNARPSKKVAEAKAR---KQKKM-QRKLESAKKKA 728
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +3
Query: 225 Y*TESPETGHELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 392
Y ++P T ++ Y+++M + P+K + KA KQKKM +++L++ + ++
Sbjct: 677 YFKQTPVTKEQVALYRERMREFNARPSKKVAEAKAR---KQKKM-QRKLESAKKKA 728
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,924,210
Number of Sequences: 27780
Number of extensions: 254969
Number of successful extensions: 921
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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