Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021897X
         (484 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    61   6e-12
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   2.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   4.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   4.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.9  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 60.9 bits (141), Expect = 6e-12
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +1

Query: 352 MFGDVNISAILDSFSISYDKRVRPNYGGKPNVIIEVLKTSFI 477
           + GDVNISAILDSFS+SYDKRVRPNYGG P   +EV  T ++
Sbjct: 35  VLGDVNISAILDSFSVSYDKRVRPNYGGPP---VEVGVTMYV 73


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 184 PPILTHNYTLHFDI 143
           PPIL +NYT+  D+
Sbjct: 349 PPILYYNYTVDRDL 362


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 184 PPILTHNYTLHFDI 143
           PPIL +NYT+  D+
Sbjct: 349 PPILYYNYTVDRDL 362


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 480 FDETCFKYLDNYVRLTSIVW 421
           F+E+      NY+R TS+V+
Sbjct: 55  FNESSSSVFPNYIRTTSMVF 74


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 480 FDETCFKYLDNYVRLTSIVW 421
           F+E+      NY+R TS+V+
Sbjct: 55  FNESSSSVFPNYIRTTSMVF 74


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 20  ISLDSFKLYGMSS*ICASMNLT*KIQD 100
           I+L +   YG  + I  SMN+T  I D
Sbjct: 37  IALYAHSSYGRENFIYGSMNMTVAITD 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,703
Number of Sequences: 336
Number of extensions: 1445
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)