Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021896
         (510 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.0  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   7.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.9  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 348 ATDSTTSVAATRCAVLSVR*KS*GGSKATILLPIIGDGRPSV 473
           +T +TTS A T C VL+   KS   S +   LP I + + S+
Sbjct: 639 STSTTTSSAGTICTVLAEGDKSVSASASN--LPKIPERKSSL 678


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 348 ATDSTTSVAATRCAVLSVR*KS*GGSKATILLPIIGDGRPSV 473
           +T +TTS A T C VL+   KS   S +   LP I + + S+
Sbjct: 640 STSTTTSSAGTICTVLAEGDKSVSASASN--LPKIPERKSSL 679


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 296 SDVPLHDACR 267
           SD+PLHDA R
Sbjct: 420 SDIPLHDASR 429


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 278 REEERLKTFDQWPVTF 325
           R+EER +T ++W  T+
Sbjct: 878 RKEERQRTIEEWQTTW 893


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,418
Number of Sequences: 2352
Number of extensions: 10455
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)