Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021896
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.004
U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of ap... 38 0.004
Z74045-2|CAA98553.1| 155|Caenorhabditis elegans Hypothetical pr... 35 0.030
U85911-1|AAB94330.1| 155|Caenorhabditis elegans inhibitor of ap... 35 0.030
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.5
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 27 6.0
AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical ... 27 7.9
AF273816-1|AAG15165.1| 274|Caenorhabditis elegans nuclear recep... 27 7.9
>Z77654-2|CAB01130.1| 308|Caenorhabditis elegans Hypothetical
protein C50B8.2 protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 329 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 481
T E+LAR GFY + C FC +EI + + DDP H+ +P C FV
Sbjct: 45 TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 302 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 472
FD+ T ++LA+ G++ + + D+ C FC VE+ + E DDP +H++++ C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237
Query: 473 PFVR 484
F++
Sbjct: 238 DFIK 241
>U72208-1|AAD00182.1| 308|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 329 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 481
T E+LAR GFY + C FC +EI + + DDP H+ +P C FV
Sbjct: 45 TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97
Score = 35.1 bits (77), Expect = 0.030
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 302 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 472
FD+ T ++LA+ G++ + + D+ C FC VE+ + E DDP +H++++ C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237
Query: 473 PFVR 484
F++
Sbjct: 238 DFIK 241
>Z74045-2|CAA98553.1| 155|Caenorhabditis elegans Hypothetical
protein T27F2.3 protein.
Length = 155
Score = 35.1 bits (77), Expect = 0.030
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 260 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 424
DM ++RL TF D+ P T + +A+ GFY G C AFC E+
Sbjct: 10 DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68
Query: 425 EGDDPAADHRRWAPQCPFVR 484
E DDP +H + C FVR
Sbjct: 69 E-DDPWYEHTKRDEPCEFVR 87
>U85911-1|AAB94330.1| 155|Caenorhabditis elegans inhibitor of
apoptosis homolog protein.
Length = 155
Score = 35.1 bits (77), Expect = 0.030
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = +2
Query: 260 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 424
DM ++RL TF D+ P T + +A+ GFY G C AFC E+
Sbjct: 10 DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68
Query: 425 EGDDPAADHRRWAPQCPFVR 484
E DDP +H + C FVR
Sbjct: 69 E-DDPWYEHTKRDEPCEFVR 87
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 242 HIQLLPDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 355
H + P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 533 HKFVSPSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 242 HIQLLPDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 355
H + P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 533 HKFVSPSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 242 HIQLLPDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 355
H + P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 533 HKFVSPSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 242 HIQLLPDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 355
H + P +PD EEE +T ++ TF TP Q+A NG
Sbjct: 533 HKFVSPSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 415 HDFYLTESTAHLVAATEVVESVAGQLFRRQKRNGPLIKCFQTFLF 281
HDF E+T + TEV + G R PL+ FQ +F
Sbjct: 74 HDFCFIENTYFVPNGTEVTDEARGGRHINYYRWVPLVLLFQAAMF 118
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -3
Query: 415 HDFYLTESTAHLVAATEVVESVAGQLFRRQKRNGPLIKCFQTFLF 281
HDF E+T + TEV + G R PL+ FQ +F
Sbjct: 74 HDFCFIENTYFVPNGTEVTDEARGGRHINYYRWVPLVLLFQAAMF 118
>AL021470-1|CAA16292.1| 401|Caenorhabditis elegans Hypothetical
protein Y17D7A.3a protein.
Length = 401
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 260 DMPDMRREEERLKTFDQWPVTFLTPE 337
DM MR+ +E + FD W + F PE
Sbjct: 368 DMLKMRQRQEISRVFDIWTIDFSHPE 393
>AF273816-1|AAG15165.1| 274|Caenorhabditis elegans nuclear receptor
NHR-65 protein.
Length = 274
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 260 DMPDMRREEERLKTFDQWPVTFLTPE 337
DM MR+ +E + FD W + F PE
Sbjct: 241 DMLKMRQRQEISRVFDIWTIDFSHPE 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,549,420
Number of Sequences: 27780
Number of extensions: 224111
Number of successful extensions: 577
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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