Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021896
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   7.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.8  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 296 SDVPLHDACR 267
           SD+PLHDA R
Sbjct: 331 SDIPLHDATR 340


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 296 SDVPLHDACR 267
           SD+PLHDA R
Sbjct: 411 SDIPLHDATR 420


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 296 SDVPLHDACR 267
           SD+PLHDA R
Sbjct: 331 SDIPLHDATR 340


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 346 PQRILLPRSRRRGV 387
           P+R+LLP+ ++ G+
Sbjct: 599 PERLLLPKGKKEGM 612


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 346 PQRILLPRSRRRGV 387
           P+R+LLP+ ++ G+
Sbjct: 599 PERLLLPKGKKEGM 612


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 328 QKRNGPLIKC 299
           QKRNG +I+C
Sbjct: 365 QKRNGSMIEC 374


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 346 PQRILLPRSRRRGV 387
           P+R++LPR +  G+
Sbjct: 603 PERLILPRGKPEGM 616


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 346 PQRILLPRSRRRGV 387
           P+R++LPR +  G+
Sbjct: 603 PERLILPRGKPEGM 616


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,086
Number of Sequences: 438
Number of extensions: 2839
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)