Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021895
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   2.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.3  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +1

Query: 211 IEKIP--ELPMVVADKVKRSTRPNRLSSS*GASRHGLISLRC 330
           + KIP  E P   +     S  P   SS  G++   ++SL C
Sbjct: 211 VPKIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 252


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 212 LKRFPSFPWL*PTKSRDQQDQTGCHLPE 295
           L+ FPS P++    S D   +TG  +PE
Sbjct: 55  LRLFPSVPFISRYASEDFVTKTGNTIPE 82


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +1

Query: 217 KIP--ELPMVVADKVKRSTRPNRLSSS*GASRHGLISLRC 330
           KIP  E P   +     S  P   SS  G++   ++SL C
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 41


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +1

Query: 217 KIP--ELPMVVADKVKRSTRPNRLSSS*GASRHGLISLRC 330
           KIP  E P   +     S  P   SS  G++   ++SL C
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +1

Query: 211 IEKIP--ELPMVVADKVKRSTRPNRLSSS*GASRHGLISLRC 330
           + KIP  E P   +     S  P   SS  G++   ++SL C
Sbjct: 211 VPKIPPAEFPTTSSSSALESPDPASRSSCLGSNTSSMLSLNC 252


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 493 GGFSLLTFRSSTPG 452
           GGF+++ F+++ PG
Sbjct: 585 GGFTIIRFKATNPG 598


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,392
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)