Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021895
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   0.77 
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    25   2.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   5.4  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +3

Query: 396 GPLIIFNKDQGLTR-AFRNIPGVELLNV--NKLKPPEAGS 506
           G  +I N  +  TR AF+++P +++LNV  NK+   E G+
Sbjct: 515 GLRLISNNIENFTRKAFKDLPSLQILNVARNKISYIEKGA 554


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 216 KDSRASHGCSRQSQEINKTKQAVIFLR 296
           K+ +    CS ++  ++KT  A++F+R
Sbjct: 81  KEGKCIPKCSNENMPLSKTSTAILFVR 107


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 58  RRHPDRTYEYHHHGH 14
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,461
Number of Sequences: 2352
Number of extensions: 11128
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)