Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021894
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 107 9e-24
07_01_0578 + 4295386-4296489,4297394-4297507 106 1e-23
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 34 0.10
10_02_0199 + 6668902-6669293,6669825-6669882 33 0.18
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.18
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 31 0.54
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 30 1.3
09_03_0046 + 11862923-11863112,11863225-11863406,11863522-118636... 30 1.7
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 30 1.7
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 2.2
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 29 2.2
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 2.9
05_03_0163 + 9070781-9071320 29 2.9
05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 28 5.1
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 28 5.1
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 28 5.1
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 28 6.7
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 6.7
08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 28 6.7
08_02_1285 - 25881091-25881798 28 6.7
04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043 28 6.7
12_01_0559 + 4527769-4527924,4528038-4528129,4528799-4528905,452... 27 8.9
10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955 27 8.9
07_03_1720 + 29019578-29020172,29021208-29021383,29022993-29023058 27 8.9
04_04_1660 - 35140641-35141894 27 8.9
04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378 27 8.9
04_03_1035 - 21887562-21890030 27 8.9
03_01_0147 - 1170481-1171260,1171332-1171511 27 8.9
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 27 8.9
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 107 bits (256), Expect = 9e-24
Identities = 44/49 (89%), Positives = 47/49 (95%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 243 HQTS 254
HQTS
Sbjct: 63 HQTS 66
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPDFP 516
+ ++AAT VP+LV ARGH IE +P+FP
Sbjct: 127 VASALAATAVPSLVLARGHRIEGVPEFP 154
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 106 bits (255), Expect = 1e-23
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Frame = +3
Query: 75 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 248
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 249 TS 254
TS
Sbjct: 66 TS 67
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 433 LGGSVAATGVPALVQARGHIIEKIPDFP 516
+ ++AAT VP+LV ARGH IE +P+ P
Sbjct: 128 VASALAATSVPSLVLARGHRIETVPELP 155
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 608
LPLV++D + I KT QA+ L+++ A++D K
Sbjct: 154 LPLVISDSAESIEKTSQAIKILKQVGAYADAEK 186
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 38 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 193
ASL N I +PTF +G K G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 364
RE GG + +SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGA----QSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +2
Query: 38 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 193
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 38 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 193
ASL N I +PT +G K G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +2
Query: 200 QELEAALLREQGGWSPNQSESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 364
+++ A ++GG S ++S+ G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGS-DKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 365 MFAPTKP-WR 391
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>09_03_0046 +
11862923-11863112,11863225-11863406,11863522-11863634,
11863894-11864140,11864333-11864452,11864601-11864604,
11864800-11864846,11864992-11865068,11865381-11865431,
11865519-11865567,11865694-11865718,11866226-11866344
Length = 407
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 388 AALASSRQPPTAES-GLGGSVAATGVPALVQARGHIIEKIPDFPWL*PTKSRRSTRPNRL 564
A L ++ PP + + G AA G+P LV+A I P+L P S + +
Sbjct: 13 ALLRAAHVPPAPRARSIRGLAAARGLPPLVRATAAAIAPSSFCPYL-PRLSSARSFSSST 71
Query: 565 SSS*GASRHGLIS 603
S S GAS G +S
Sbjct: 72 SCSAGASLGGAVS 84
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 209 EAALLREQGGWSPNQSESWGTGRAV 283
EAALLR G W+ + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = +2
Query: 107 RDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQSESWGTGRAVA 286
R AG + PP R G TSG G S + V+ + +S + S S+G G
Sbjct: 100 RHAAGGGETPPARRGGGRTSGGGG--SSYSVEHSPSP--SPLHPYSDSGSGSYGGGLVAN 155
Query: 287 RIPRVRGGGTHRSGQGAFGNMCR 355
+ GGG R + N+ R
Sbjct: 156 SRAKGGGGGAPRGNETVIPNIIR 178
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGT--HRSGQGAF 340
R + GW +Q++ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 38 ASLK*RNESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 193
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>05_03_0163 + 9070781-9071320
Length = 179
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQG 334
R GGWS ++E WG G ++ GGG RS +G
Sbjct: 15 RGAGGWS-QRAEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>05_06_0065 -
25303143-25303769,25303868-25304758,25305096-25305202,
25305518-25305629
Length = 578
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = +3
Query: 60 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 239
S + PL + S KS + ++ LP V P + +HV K S P C S+
Sbjct: 498 SRDMVPPLPPLPSMKSPSESWLSRALPSVSSNPPATSFLG-IHVQHKKQSPPPRCSSRAP 556
Query: 240 GHQTSPNHGVP 272
+ H P
Sbjct: 557 AKLVADGHARP 567
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 105 SETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSPNHGVPDVLS 284
+E +Q K PF+ PI L+N + +S RQP E SPN P +
Sbjct: 37 AELLQEHQKLGPFMQVLPICSRLLNQEIMRVSGMFRQPGVGDFERSQPASPNQMHPSHIV 96
Query: 285 PEF 293
P F
Sbjct: 97 PNF 99
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +2
Query: 155 AHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQG 334
A T+G G YV + + ALL E + E GRA RI RG G GQG
Sbjct: 35 AETAGSGD--DEEYVSDPDDALLPEMRRREASDDEGSEEGRA--RIGSDRGDGDDGDGQG 90
Query: 335 A 337
A
Sbjct: 91 A 91
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +2
Query: 245 PNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 388
P + G G A + RV GGG+ G+GA + G + W
Sbjct: 77 PERRRQEGAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLW 124
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 380 SWGRTYVHHDTCYRRHPDRTYEYHH 306
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>08_02_1437 -
27096364-27097252,27098931-27099022,27099382-27099654,
27099872-27100819
Length = 733
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 370 RPHEALAALASSRQPPTAESGLGGSVAATGVPALVQARGHII 495
R ++ L+ +A +PP +S G A G PA+ G+ +
Sbjct: 653 RVNDWLSEIAKPTEPPPPQSDADGEEAGGGAPAVANGGGNTV 694
>08_02_1285 - 25881091-25881798
Length = 235
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 101 KERDGAGCSQAPPVRVQGAHTSGPG 175
+E DG G ++A V +GAH +G G
Sbjct: 173 EEEDGEGSAEAMEVEEEGAHLAGAG 197
>04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043
Length = 436
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 284 RQHVRYPMIRTGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTYGRL 150
++HV +P G + L+ A L R+L H + ++ R L
Sbjct: 5 KKHVLFPFTSKGHIAGFLSLASRLHRILPHATITLVSTPRNVAAL 49
>12_01_0559 +
4527769-4527924,4528038-4528129,4528799-4528905,
4528987-4529042,4529196-4529346,4530223-4530528,
4530753-4531597
Length = 570
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 275 VRYPMIRTGLVTSLLAHAVGLPRVL 201
V P +TG S LA AVG+PRVL
Sbjct: 89 VENPHKKTGYSISELAEAVGIPRVL 113
>10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955
Length = 184
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFG 343
GG N WG+G + + GGG + SG G G
Sbjct: 38 GGGGSNGGSGWGSGSG-SGYGQASGGGAYASGGGGAG 73
>07_03_1720 + 29019578-29020172,29021208-29021383,29022993-29023058
Length = 278
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 379 EALAALASSRQPPTAESGLGGSVAATGVPA 468
+A AA ASS PPTA SG G + G PA
Sbjct: 90 QAAAAAASSGSPPTASSG-GLAPGHAGSPA 118
>04_04_1660 - 35140641-35141894
Length = 417
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 233 GGWSPNQSESWGTGRAVARIPRVRGGGTHR 322
GGW+P + +WG + + PR+ G R
Sbjct: 255 GGWAPVERSAWGDVFEILKRPRLLAGAGGR 284
>04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378
Length = 567
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -2
Query: 581 APQEDDSLFGLVDLLDFVGYNQGKSGIFSIM 489
+P++ ++ FG+ DLLD +G + K+ + SI+
Sbjct: 518 SPRKTEARFGICDLLDDIGADGDKTIVVSIV 548
>04_03_1035 - 21887562-21890030
Length = 822
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 194 YVQELEAALLREQGGWSPNQSESWGT-GRAVARIPRVRGGGTHRSGQGAFGNMCRGG 361
YV L A +R G P SE G RAVA GG G+ A C G
Sbjct: 762 YVGYLAADCVRLAGRDRPTMSEVVGVLERAVAACDEYEEGGAGAGGEPALSRSCTDG 818
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 32 GIASLK*R-NESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 193
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -2
Query: 323 TYEYHH-HGHAEFGRQH 276
T+++HH HGH FGR H
Sbjct: 144 THDHHHGHGHHLFGRDH 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,100,259
Number of Sequences: 37544
Number of extensions: 420515
Number of successful extensions: 1615
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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