Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021894
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 113 5e-25
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 113 6e-25
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 113 6e-25
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 113 6e-25
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 113 6e-25
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 34 0.45
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 34 0.45
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 3.2
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 29 9.8
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 29 9.8
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 29 9.8
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 29 9.8
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 29 9.8
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 29 9.8
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 113 bits (272), Expect = 5e-25
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = +2
Query: 251 QSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
++ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 63 RAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 86.2 bits (204), Expect = 8e-17
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQT 251
HQT
Sbjct: 60 HQT 62
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 32.7 bits (71), Expect = 1.0
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE+ P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELP 151
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.1 bits (72), Expect = 0.79
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV +GH IE++P+ P
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELP 151
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 78 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 126
Score = 86.2 bits (204), Expect = 8e-17
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = +3
Query: 60 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 239
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 240 GHQTS 254
GHQTS
Sbjct: 73 GHQTS 77
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 164 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 197
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELP 165
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 113 bits (271), Expect = 6e-25
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = +2
Query: 254 SESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 400
+ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 85.8 bits (203), Expect = 1e-16
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 63 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 242
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 243 HQTS 254
HQTS
Sbjct: 60 HQTS 63
Score = 49.6 bits (113), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 510 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 611
LPLVV DKV+ KTK+AV+ L++LKAW+DI KV
Sbjct: 150 LPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKV 183
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +1
Query: 442 SVAATGVPALVQARGHIIEKIPDFP 516
++AA+ +PALV ++GH IE++P+ P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 33.9 bits (74), Expect = 0.45
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 506 PTSPGCSRQSPGDQQDQTGCHLPEAPQGMV 595
P PGC +++ GD DQ+ C PEA V
Sbjct: 270 PAPPGCPKEAAGDASDQSTCTSPEASPSSV 299
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 33.9 bits (74), Expect = 0.45
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 506 PTSPGCSRQSPGDQQDQTGCHLPEAPQGMV 595
P PGC +++ GD DQ+ C PEA V
Sbjct: 77 PAPPGCPKEAAGDASDQSTCTSPEASPSSV 106
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 3.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 59 ESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTS 166
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 385
R + G + + E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 385
R + G + + E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 385
R + G + + E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 385
R + G + + E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 29.5 bits (63), Expect = 9.8
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 5/70 (7%)
Frame = +1
Query: 274 TCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALASSRQPPTAESGLG 438
T CR +AC W W++ V +GC W + H R+P E L
Sbjct: 80 TGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSLH 139
Query: 439 GSVAATGVPA 468
G+ + PA
Sbjct: 140 GAPSCLSTPA 149
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 29.5 bits (63), Expect = 9.8
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +2
Query: 224 REQGGWSPNQSESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP 385
R + G + + E W G + P ++ G ++G G C AP++P
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQP 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,846,629
Number of Sequences: 237096
Number of extensions: 2046616
Number of successful extensions: 6951
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6916
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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