Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021893
(656 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 43 2e-06
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 1.7
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 2.2
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 22 5.1
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 6.7
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 6.7
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 6.7
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 21 8.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.9
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 21 8.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 43.2 bits (97), Expect = 2e-06
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 342 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
EV V+G + PI FE + ++ + VK GY +PT IQ P+ +SG++L+
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLM 199
Score = 42.3 bits (95), Expect = 3e-06
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQI 648
+QTGSGKT A++LP I ++ + PP + P+ ++++PTRELA QI
Sbjct: 202 AQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQI 251
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 571 YLCAQLLARCRPTFCRNPFGYPTKFF 494
+ CA ++ C FCR +PT F+
Sbjct: 288 FYCALIILLCIYYFCRAFIIFPTHFY 313
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 577 VGYLCAQLLARCRPTFCRN 521
+GY+C + CRP C N
Sbjct: 253 LGYICEINVDDCRPGACHN 271
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 146 GLATVAIDLEDLEALVGKKNSLEGRTCDA 232
G+ +I+ +DL A G KN+L DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/53 (18%), Positives = 23/53 (43%)
Frame = -3
Query: 192 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 34
T+ R+ +++++ + I + TT++ A DYF ++ V
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/53 (18%), Positives = 23/53 (43%)
Frame = -3
Query: 192 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDV 34
T+ R+ +++++ + I + TT++ A DYF ++ V
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory
receptor candidate 50 protein.
Length = 350
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 87 AIIPVTRHDYFSDLVEDVYL 28
A++PV +H LV VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.0 bits (42), Expect = 8.9
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 90 TAIIPVTRHDYFSDLVEDVYLNYGFFLT 7
T IP DY DLV + +N+ +T
Sbjct: 215 TTEIPPEPEDYVEDLVGHIEVNHSAPIT 242
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 253 VKQNPNLGVACSALQRI 203
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 253 VKQNPNLGVACSALQRI 203
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 253 VKQNPNLGVACSALQRI 203
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 253 VKQNPNLGVACSALQRI 203
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 21.0 bits (42), Expect = 8.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 537 GLHLASNCAHK*PTAYSER*WSDCFGLGAYQ 629
G LA N + YS W+D G G ++
Sbjct: 113 GRFLAPNLTYLLVALYSGYVWTDILGFGYFR 143
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,942
Number of Sequences: 336
Number of extensions: 3452
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -