Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021893
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 63 2e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 59 4e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 57 1e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 56 3e-08
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 3e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 45 6e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 43 3e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 41 8e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 39 0.003
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 38 0.007
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 36 0.022
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 35 0.051
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.20
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 33 0.27
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 33 0.27
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 32 0.36
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 31 1.1
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.4
SB_29985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.3
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 29 4.4
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 7.7
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 434
+PFNKNFY+ HP + K+S E+++ R K + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
+ Y +PT IQ Q PIA+SG++++G
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIG 559
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
++TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI
Sbjct: 561 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQI 606
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = +1
Query: 541 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQE 150
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 303 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 470
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 431
QPF K+FY P + K +P E +E+R E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 432 TMGYKEPTPIQAQGWPIAMSGKNLV 506
Y++PTPIQAQ P+ MSG++++
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMI 146
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 529 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
K +Y P + P I G IA+V+ PTRELA QI +
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHR 162
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +3
Query: 276 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 455
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 456 PIQAQGWPIAMSGKNLV 506
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
++TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 116 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/83 (30%), Positives = 44/83 (53%)
Frame = +3
Query: 261 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 440
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 441 YKEPTPIQAQGWPIAMSGKNLVG 509
++ PTPIQ Q MSG++++G
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIG 114
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 4/52 (7%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQ 654
++TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++
Sbjct: 145 AETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEE 196
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +3
Query: 327 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 507 G 509
G
Sbjct: 143 G 143
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 315 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 482
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 483 AMSGKNLVG 509
G G
Sbjct: 197 MAHGPKKSG 205
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 541 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 648
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
+QTGSGKT AY+LP + + Q P+AL +APTRELA+QI
Sbjct: 523 AQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQI 568
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 351 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
VSG I F E F + + + GY+ PTP+Q PI M+G++L+
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLM 520
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQI 648
++TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+
Sbjct: 117 ARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 321 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 501 LV 506
++
Sbjct: 751 VM 752
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + N P A+ +APTRELA QI
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 321 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 501 LV 506
++
Sbjct: 174 VM 175
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQ 654
+Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+
Sbjct: 129 AQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQK 177
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
++TGSGKTLA+++P I + Q DG ALV++PTRELA Q
Sbjct: 94 AKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQ 137
Score = 34.3 bits (75), Expect = 0.089
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 378 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
++ F + G+ G+ PT IQ QG P+A+SG++++G
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLG 92
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQI 648
+QTGSGKTLAY+ P +VH + R G P A ++ P RELA QI
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQI 471
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/46 (47%), Positives = 29/46 (63%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
++TGSGKT A+ LP + + + P G A+VL PTRELA QI
Sbjct: 51 AKTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQI 91
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+Q+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+
Sbjct: 41 AQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQK 83
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
++TGSGKTLA+++P +V + + + +G ++++PTREL+ Q
Sbjct: 616 AKTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQ 659
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKT A+ LP + + + P AL+L PTRELA QI +
Sbjct: 8 AETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISE 50
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKT A+++P + G AL+L+PTRELA Q Q+
Sbjct: 325 ARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQK 369
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 14/61 (22%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQI 648
++TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q+
Sbjct: 175 AETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQV 234
Query: 649 Q 651
+
Sbjct: 235 K 235
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
S+TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q+
Sbjct: 204 SETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQM 241
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 420 QGVKTMGYKEPTPIQAQGWPIAMSGKNL 503
+ V +G+ PTPIQA P+A+ GK++
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDV 50
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++ G+GKT AY++P + + + ALVL PTRELA Q Q
Sbjct: 91 AKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQ 133
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
FE+ + G+ G+ +P+PIQ + P+A++G++++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDIL 88
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++ G+GKT AY++P + + + ALVL PTRELA Q Q
Sbjct: 91 AKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQ 133
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
FE+ + G+ G+ +P+PIQ + P+A++G++++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDIL 88
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 378 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
I FE+ + + + V GYK+PTP+Q PI ++L+
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLM 916
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPP 582
+QTGSGKT A+++P + I + P
Sbjct: 919 AQTGSGKTAAFLIPILSRIYMEGP 942
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
SQ+G+GKT A++L + ++ P P + L+PT ELA+Q
Sbjct: 149 SQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQ 188
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 336 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 491
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 363 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 476
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 601 PIALVLAPTRELAQQIQQ 654
P ALVL+PTRELA QIQ+
Sbjct: 4 PQALVLSPTRELANQIQK 21
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 309 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 440
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_29985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +2
Query: 425 CKDNGLQRTDAHSSSRLADSYVWKEFS--WVAKRV--PAKRWPTSCQQL 559
C D TD S +++ D +W+EF+ WV RV P+ SC +
Sbjct: 125 CPDVMYYTTDYSSETKMRDKAIWREFATKWVLVRVALPSVTHSFSCSDI 173
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 193 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 83
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 321 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 413
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 520 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVL 618
GSGK LAY+LP I I + +GP+ L+L
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 217 ALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQIWN-HRFHGYYSS 74
AL+RI + ++ C +YRR CC L +W H + Y+SS
Sbjct: 197 ALERIATPVTTSKLRCSTTQECCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,270,957
Number of Sequences: 59808
Number of extensions: 412811
Number of successful extensions: 1099
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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