Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021893
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    43   7e-06
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   2.1  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    25   2.1  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   6.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 43.2 bits (97), Expect = 7e-06
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
 Frame = +1

Query: 511 SQTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQI 648
           +QTGSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI
Sbjct: 218 AQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQI 265



 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +3

Query: 342 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLM 215


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -3

Query: 144 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 4
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = +2

Query: 446 RTDAHSSSRLADSYVWKEFSWVAKRVP--AKRWPTSCQ 553
           R  AH    +AD  +    S VA  VP  A RWP  C+
Sbjct: 148 RYTAHDQLSVADFAIVATLSTVAIFVPLPADRWPRVCE 185


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -2

Query: 217 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 122
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 294 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 386
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,558
Number of Sequences: 2352
Number of extensions: 13037
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)