Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021893
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 67 9e-12
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 67 1e-11
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 3e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 45 4e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 45 4e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 42 5e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 42 5e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 42 5e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 41 7e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 41 7e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 41 7e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 40 0.001
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.001
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 40 0.001
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 40 0.001
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 40 0.001
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 40 0.002
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 39 0.003
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 39 0.003
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 38 0.005
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 37 0.014
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 37 0.014
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.019
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.025
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.025
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 35 0.058
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.077
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 34 0.077
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 34 0.077
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.18
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.24
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.54
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 30 1.3
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.7
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.2
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.8
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 5.1
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 5.1
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 5.1
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 5.1
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 6.7
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/48 (64%), Positives = 40/48 (83%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQE 220
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = +3
Query: 258 PFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 437
P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 89 PIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LLYG 147
Query: 438 GYKEPTPIQAQGWPIAMSGKNLV 506
+++PT IQ+ WPIAMSG++++
Sbjct: 148 KFQKPTVIQSISWPIAMSGRDII 170
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQ 356
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +3
Query: 255 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 434
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 435 MGYKEPTPIQAQGWPIAMSGKNLVG 509
Y++PTPIQA P A+SG++++G
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLG 307
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQ 392
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 FTQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQG 425
+ + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 259 YYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV 318
Query: 426 VKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
+K Y +PT IQAQ P MSG++++G
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIG 346
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 327 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 507 G 509
G
Sbjct: 343 G 343
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQ 654
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEE 396
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 6/53 (11%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQ 651
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Frame = +3
Query: 243 FCFTQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 401
F + +P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 402 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVG 509
+ G ++ G+++P+PIQ+Q WP+ +SG++ +G
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIG 126
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 648
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 282 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 458
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 459 IQAQGWPIAMSGKNLVG 509
IQ QG P+A+SG++++G
Sbjct: 216 IQIQGIPVALSGRDMIG 232
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 425 AETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +3
Query: 345 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLM 207
Score = 36.3 bits (80), Expect = 0.019
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 11/57 (19%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQI 648
+QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 10/58 (17%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQ 654
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI +
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK 240
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 321 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 501 LV 506
L+
Sbjct: 179 LM 180
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 10/58 (17%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQ 654
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI +
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK 224
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 321 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 501 LV 506
L+
Sbjct: 163 LM 164
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 10/58 (17%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQ 654
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI +
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHK 221
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 321 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 500
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 501 LV 506
L+
Sbjct: 160 LM 161
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQI 434
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F EAN + +Q+ V GY + TPIQ P+ G +++
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIM 382
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQI 645
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
F EAN + +++ V GY + TPIQ P+ G +++
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIM 593
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +1
Query: 484 LCLERI*LGSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
L L + + S TGSGKTLA++LP + I N G AL+L+P+REL QI
Sbjct: 44 LNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQI 96
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
Score = 34.3 bits (75), Expect = 0.077
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F +++ P +++ V+ GY TPIQ P+ GK+++
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQI 648
++TGSGKT A+++P + + + G GP A+++APT+EL QI
Sbjct: 133 ARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQI 179
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQI 648
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
Score = 34.3 bits (75), Expect = 0.077
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 375 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
P + F +++ P +++ V+ GY TPIQ P+ GK+++
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDIL 339
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Frame = +1
Query: 436 WVTKNRRPFKLKAGR*L---CLERI*LGS------QTGSGKTLAYILPAIVHINNQPPIR 588
W+T+ + ++K + C+ +I GS +TG+GKTLA+ +P + ++ P
Sbjct: 99 WITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDP--- 155
Query: 589 RGDGPIALVLAPTRELAQQIQQ 654
G AL+L PTRELA QI +
Sbjct: 156 --YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Frame = +1
Query: 436 WVTKNRRPFKLKAGR*L---CLERI*LGS------QTGSGKTLAYILPAIVHINNQPPIR 588
W+T+ + ++K + C+ +I GS +TG+GKTLA+ +P + ++ P
Sbjct: 99 WITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDP--- 155
Query: 589 RGDGPIALVLAPTRELAQQIQQ 654
G AL+L PTRELA QI +
Sbjct: 156 --YGIYALILTPTRELAFQIAE 175
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/45 (42%), Positives = 34/45 (75%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
++TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q
Sbjct: 112 AKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQ 155
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+
Sbjct: 73 AQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQK 115
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+
Sbjct: 73 AQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQK 115
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 33 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 405 PDYVQQGVKTMGYKEPTPIQAQGWPIAM 488
P+ V + ++ MG+ EPT IQ+ P A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAV 190
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
S+TGSGKT A+++P + + R G AL+++PTRELA Q
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 369 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
H +++ V + ++ G+ +PTPIQ + P M GK++V
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVV 65
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
S+TGSGKT A+++P + + R G AL+++PTRELA Q
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 369 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 506
H +++ V + ++ G+ +PTPIQ + P M GK++V
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVV 65
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
TG+GKT A++LP + + +P + LVL PTRELA Q+ Q
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQ 237
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 387 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 503
FE+ N + + GY +PTPIQ P+A++GK++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDI 188
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.025
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++TGSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 88 AETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 645
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 645
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
++ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q
Sbjct: 87 AKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQ 129
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.077
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 517 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 645
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+
Sbjct: 70 AQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQK 112
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 654
+Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+
Sbjct: 70 AQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQK 112
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 645
++TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 120 AKTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 505 LGSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
+ + TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 161 IAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 517 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 648
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
+Q+G+GKT A++L + I+ P + LAPT ELA+QI
Sbjct: 255 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQI 295
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
+Q+G+GKT A++L + I+ P + LAPT ELA+QI
Sbjct: 280 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQI 320
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 511 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 648
+Q+G+GKT A++L + I+ P + LAPT ELA+QI
Sbjct: 664 AQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQI 704
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 249 FTQPFNK-NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQ 383
+TQP++ +F P PT++++ PY Y H + + + HN Q
Sbjct: 61 YTQPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 3 PASERIHSLNKHLQLNPKNNHVW 71
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 89 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 205
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 517 TGSGKTLAYILPAIVH 564
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 500 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 321
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 320 D 318
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 500 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 321
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 320 D 318
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 144 RRIIAEFVASSKFGTTVSTAIIPV 73
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 144 RRIIAEFVASSKFGTTVSTAIIPV 73
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 237 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 58
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 57 FSDLVEDVYLNYGFFLTQ 4
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 237 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 58
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 57 FSDLVEDVYLNYGFFLTQ 4
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 237 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 58
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 57 FSDLVEDVYLNYGFFLTQ 4
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 237 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 58
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 57 FSDLVEDVYLNYGFFLTQ 4
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 282 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 440
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 282 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 440
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 449 TDAHSSSRLADSYVWKEFSWVAKRVPAKRWP 541
TDA R+A S++ + RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,343,245
Number of Sequences: 27780
Number of extensions: 310542
Number of successful extensions: 1045
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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