Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021892
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 159 3e-40
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 95 1e-20
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 87 2e-18
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 81 1e-16
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 81 2e-16
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 79 4e-16
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 79 8e-16
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 77 3e-15
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 75 9e-15
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 73 5e-14
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 72 7e-14
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 72 9e-14
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 70 3e-13
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 66 3e-12
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 64 2e-11
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 57 3e-09
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 56 3e-09
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 52 8e-08
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 51 2e-07
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 49 5e-07
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 40 4e-04
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 33 0.028
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 33 0.028
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 32 0.086
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 30 0.26
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 30 0.26
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.46
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 0.61
SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2 |Sc... 28 1.1
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 1.4
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 28 1.4
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 27 1.8
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 27 2.4
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 27 2.4
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 3.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.2
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 4.3
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 26 5.6
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 26 5.6
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 5.6
SPAC227.10 |||prefoldin subunit 2 |Schizosaccharomyces pombe|chr... 26 5.6
SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyc... 26 5.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 5.6
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 25 7.5
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 25 7.5
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 25 7.5
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 25 9.9
SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyce... 25 9.9
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 159 bits (387), Expect = 3e-40
Identities = 75/91 (82%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
SQLLTLMDGMK S+V+VMAATNRPNSIDPALRRFGRFDRE+D+GIPD TGRLEILRIHT
Sbjct: 346 SQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHT 405
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA-ISRLCA 272
KNMKL DDVDLEQIAAE+HG+VG+ ++ LC+
Sbjct: 406 KNMKLADDVDLEQIAAETHGYVGSDLASLCS 436
Score = 139 bits (337), Expect = 3e-34
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
LASLCSEAA+QQIREKMD+IDL++D+IDAEVL+SL V+MDNFR+A+ S+PSALRETVVE
Sbjct: 431 LASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVE 490
Query: 437 VPNVTWTDIGGLEGVKRELQELVQI 511
VPNV W DIGGLE VKREL+E VQ+
Sbjct: 491 VPNVRWEDIGGLEEVKRELRETVQM 515
Score = 95.1 bits (226), Expect = 8e-21
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV + +KFL+FG+ PS+GVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL
Sbjct: 516 PVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELL 568
Score = 80.2 bits (189), Expect = 2e-16
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLLT MDG+ +V V+ ATNRP+ IDPAL R GR D+ I + +PD R IL+
Sbjct: 621 NQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQL 680
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
++ + +DVDL +A +HG GA
Sbjct: 681 RHTPVAEDVDLRAVAKATHGFSGA 704
Score = 70.9 bits (166), Expect = 2e-13
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP F G++P RG+L YGPPG GKTL+A+A+ANE A F + GPE++
Sbjct: 243 PLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM 295
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 94.7 bits (225), Expect = 1e-20
Identities = 50/108 (46%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Frame = +3
Query: 9 LLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 188
LLTL+DGM + V+V+AATNRPNSID ALRR GR ++EI+IGIPD + RL+I+++
Sbjct: 403 LLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSG 462
Query: 189 MKLG-DDVDLEQIAAESHGHVGAISRLCARRQPCSRFVRRWISLTSRT 329
+ +D LE +A+ +H +VGA R+ R ++R ISL T
Sbjct: 463 VPNEINDAQLEDLASRTHAYVGA-DLAAVVREAALRAIKRTISLQKDT 509
Score = 79.0 bits (186), Expect = 6e-16
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +3
Query: 9 LLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 188
LL +DG++ +V+V+AATNRP+ IDPAL R GR DR + +G P+ R +I++I +
Sbjct: 670 LLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEK 729
Query: 189 MKLGDDVDLEQIAAESHGHVGA-ISRLC 269
MK +DVDL+ IA ++ G GA + LC
Sbjct: 730 MKFAEDVDLDLIAEKTEGCSGAEVVALC 757
Score = 73.7 bits (173), Expect = 2e-14
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P+ H + F + G++P +GVL YGPPGC KT+ AKAIA E NFI+VKGPEL
Sbjct: 567 PLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPEL 618
Score = 60.9 bits (141), Expect = 2e-10
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
LA++ EAAL+ I+ I L+ D ++ AV MD+ +A++ SA+RE ++E
Sbjct: 487 LAAVVREAALRAIKRT---ISLQKDTSGLDIFG--AVQMDDLEFALSSVRQSAMREFMME 541
Query: 437 VPNVTWTDIGGLEGVKRELQELVQ 508
PNV W+DIGG E VK++L+E V+
Sbjct: 542 SPNVHWSDIGGQEEVKQKLKESVE 565
Score = 58.8 bits (136), Expect = 7e-10
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P ++P+ F F + P RGVL YGPPG GKT++ +A+A E A ++ GP ++
Sbjct: 298 PFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVV 350
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 87.0 bits (206), Expect = 2e-18
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL MDG S H++V A TNRP+ +DPAL R GRFDR+I I PD GR +I ++H
Sbjct: 421 NQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHL 480
Query: 183 KNMKLGDDVDL--EQIAAESHGHVGA-ISRLC 269
K++K D++DL +++A + G GA I +C
Sbjct: 481 KHIKAADNIDLIAKRLAVLTSGFTGADIMNVC 512
Score = 52.0 bits (119), Expect = 8e-08
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +1
Query: 514 VEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
+++P + + G + RG + GPPG GKTLLAKA A E F+SV G E L
Sbjct: 315 LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFL 366
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 81.0 bits (191), Expect = 1e-16
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 SQLLTLMDGMKKS---SH-VIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 170
+QLL +DG K+ +H V+ + ATN P S+DPAL R GRFDR I + +PD GRL IL
Sbjct: 388 NQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAIL 447
Query: 171 RIHTKNMKLGDDVDLEQIAAESHGHVGA 254
HT+++ LG DVDL IA + G GA
Sbjct: 448 LQHTRHVPLGKDVDLSIIARGTSGFAGA 475
Score = 48.4 bits (110), Expect = 9e-07
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 663
D + P F + G + RGVL GPPG GKT+LA+A+A E F + G +
Sbjct: 284 DFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQ 335
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 80.6 bits (190), Expect = 2e-16
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL LMDGM+ VI++ ATNRP+++DPALRR GRFDRE +PD R +I+ IHT
Sbjct: 393 STLLALMDGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHT 452
Query: 183 KNMKLGDDVDL-EQIAAESHGHVGAISRLCARRQPCSRFVRRWISLTSRTIRL 338
+N L +A +S G+ GA R + R + L T RL
Sbjct: 453 RNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRTYPQLYRSTKRL 505
Score = 59.7 bits (138), Expect = 4e-10
Identities = 24/42 (57%), Positives = 33/42 (78%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQA 636
P+ +P+ F +F MQP RGVLF+GPPG GKTL+A+A+A C +
Sbjct: 285 PLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSS 326
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 79.4 bits (187), Expect = 4e-16
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+L+T +DG ++ V+ ATNRPN++D AL R GR DR+++ G+PD GR ILRIH K
Sbjct: 305 ELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAK 364
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
+M + D+ E IA GA
Sbjct: 365 SMAIDKDIRWELIARLCPSQTGA 387
Score = 66.5 bits (155), Expect = 3e-12
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ P++F+K G+ P +G++ YGPPG GKTL A+A+AN A FI V G EL+
Sbjct: 198 PLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELV 250
Score = 31.5 bits (68), Expect = 0.11
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +2
Query: 311 LIDLEDDQIDAEVLNSLAVSMDNFRYAMT-----KSSPSALRETVVEVPNVTWTDIGGLE 475
++ L + ++ + V D +YA+ K PS V E P+VT+ D+GG +
Sbjct: 126 VVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCK 185
Query: 476 GVKRELQELVQI 511
L+E+V++
Sbjct: 186 EQIERLREVVEL 197
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 78.6 bits (185), Expect = 8e-16
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 SQLLTLMDGMK----KSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEIL 170
+Q LT MD + V+V+ ATNRP+S+D ALRR GRFDREI + +P R +IL
Sbjct: 296 AQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKIL 355
Query: 171 RIHTKNMKLGDDVDLEQIAAESHGHVGA 254
R K +KL D D Q+A ++ G+VGA
Sbjct: 356 RTMAKGLKLSGDFDFRQLAKQTPGYVGA 383
Score = 77.8 bits (183), Expect = 1e-15
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ P+ + G+ GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL
Sbjct: 511 PIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELL 563
Score = 69.3 bits (162), Expect = 5e-13
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 505 ADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
A P++HP+ + G+ P RGVL +GPPGCGKT+LA A+ANE FIS+ P ++
Sbjct: 191 AMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIV 245
Score = 69.3 bits (162), Expect = 5e-13
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +3
Query: 9 LLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKN 188
LLT +DG+ S V V+AATNRP+ IDPA+ R GR D+ + + +PDA R+EIL+ TK
Sbjct: 616 LLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQ 675
Query: 189 MKLGDDVDLEQIAAE 233
L ++V+L+ + +
Sbjct: 676 TPLHEEVNLDVLGRD 690
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 314 IDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTWTDIGGLEGVKREL 493
++ D + E L LA+ +F A+ K PS+ RE VP V+W +IG L+ ++ EL
Sbjct: 445 LNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVEL 504
Query: 494 Q 496
Q
Sbjct: 505 Q 505
Score = 26.2 bits (55), Expect = 4.3
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 314 IDLEDDQ--IDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPN-VTWTDIGGLEGVK 484
ID ED++ + E + A D R + T S E E P+ ++ +DIGGL+
Sbjct: 126 IDGEDEKKSVGQESITGSAKRKD--RRSKTNGSKRQKAEANREPPSDISLSDIGGLDDCI 183
Query: 485 RELQELV 505
EL ELV
Sbjct: 184 NELLELV 190
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -1
Query: 187 FLVCMRRISRRPVASGMPMSISRSNRPKRRSAGSMEFGRFVAAITIT 47
FL CM +S + I +NRP + GRF I +T
Sbjct: 298 FLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLT 344
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 76.6 bits (180), Expect = 3e-15
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG V V+AATNR +++DPAL R GR DR+++ +P+ R+ ILRIH++
Sbjct: 311 ELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSR 370
Query: 186 NMKLGDDVDLEQIAAESHGHVGAI 257
M + DD++ E++A + + GA+
Sbjct: 371 KMAIDDDINWEELARSTDEYNGAM 394
Score = 62.1 bits (144), Expect = 7e-11
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ DKF K G++P +G L +GPPG GKTLLA+A A + A F+ + P+L+
Sbjct: 204 PMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLV 256
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 74.9 bits (176), Expect = 9e-15
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL +DG + + ++ V+ ATNR + +DPAL R GR DR+I+ P A R EILRIH++
Sbjct: 272 ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSR 331
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
+M L +DL+ IA + +G GA
Sbjct: 332 SMNLTRGIDLKSIAEKMNGASGA 354
Score = 64.5 bits (150), Expect = 1e-11
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV+HP+ F G+ +G+L YGPPG GKTLLA+A+A+ FI V G EL+
Sbjct: 164 PVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELV 216
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 72.5 bits (170), Expect = 5e-14
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTK 185
+LL MDG ++ ATNRP+++DPAL R GR DR+I+I +P+ GR+EIL+IH +
Sbjct: 258 ELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLE 317
Query: 186 NMKLGDDVDLEQIAAESHGHVGA 254
+ ++D E + + G GA
Sbjct: 318 KVSKQGEIDYEALVKLTDGTNGA 340
Score = 62.1 bits (144), Expect = 7e-11
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+++P+ FL+ G++P +GVL YGPPG GKTLLA+A+A NF+ V
Sbjct: 151 PLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKV 197
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 72.1 bits (169), Expect = 7e-14
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+QLL MDG+ + ++++V+ TNR + ID AL R GR + ++I +PD GRL+IL+IHT
Sbjct: 403 NQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHT 462
Query: 183 KNMK----LGDDVDLEQIAAESHGHVGA 254
M L +DVD+E++A+ + GA
Sbjct: 463 SRMASNGILENDVDMEELASLTKNFSGA 490
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 523 PDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS-VKGPELL 669
P K G+ +G+L YGPPG GKTL+A+ I A V GPE+L
Sbjct: 293 PGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEIL 342
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 71.7 bits (168), Expect = 9e-14
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
S LL LMDG+ V+V+ ATNRPN +DPALRR GRFDRE +P+ R++IL I++
Sbjct: 499 STLLALMDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINS 558
Query: 183 KNM--KLGDDVDLEQIAAESHGHVGA-ISRLC 269
+ K+ + L +A + G+ GA + LC
Sbjct: 559 LHFSPKIPESY-LLHLAESTSGYGGADLKALC 589
Score = 52.4 bits (120), Expect = 6e-08
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 630
P+ +P+ FL + P RGVLF+GPPG GKTL+A+ +A C
Sbjct: 391 PLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANC 430
Score = 34.3 bits (75), Expect = 0.016
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 257 LASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVE 436
L +LC+EAAL +R I D+ + LN ++VS+ +F A K + S R V
Sbjct: 585 LKALCTEAALNAVRRTFPQIYTSSDKFLID-LNEISVSICDFVVASEKIAVSTRRSDV-- 641
Query: 437 VPNVTWTD 460
PN+ TD
Sbjct: 642 KPNIPITD 649
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 70.1 bits (164), Expect = 3e-13
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ P+ F + G++P GVL YGPPG GKTLLAKA+A E F+S+KGPELL
Sbjct: 674 PLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELL 725
Score = 63.3 bits (147), Expect = 3e-11
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +3
Query: 3 SQLLTLMDGMKKSS--HVIVMAATNRPNSIDPALRRFGRFDREIDIGI-PDATGRLEILR 173
SQLL +D + K + +V V+ ATNRP+ +DP+L R GRFD+ + +GI + +LR
Sbjct: 778 SQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLR 837
Query: 174 IHTKNMKLGDDVDLEQIAAESH 239
TK KL + +DL +IA H
Sbjct: 838 ALTKTFKLDETIDLNEIAKNCH 859
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 425 TVVEVPNVTWTDIGGLEGVKRELQELVQIRSNIP 526
T+ VP V W DIGGLE K L++ +Q+ P
Sbjct: 645 TIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFP 678
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 66.5 bits (155), Expect = 3e-12
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ HP+ + + G++P +GV+ YG PG GKTLLAKA+AN+ A F+ V G EL+
Sbjct: 210 PLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELI 262
Score = 63.3 bits (147), Expect = 3e-11
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVI-VMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+LL +DG S I V+ ATNR + +DPAL R GR DR+I PD + +I IHT
Sbjct: 317 ELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHT 376
Query: 183 KNMKLGDDVDLEQI 224
M LG+DV+LE++
Sbjct: 377 SKMNLGEDVNLEEL 390
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 434 EVPNVTWTDIGGLEGVKRELQELVQI 511
+ P ++ DIGGLE +E++E V++
Sbjct: 184 KAPTESYADIGGLESQIQEIKEAVEL 209
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 64.1 bits (149), Expect = 2e-11
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P+ D + + G+ P RGVL YGPPG GKT+L KA+AN ANFI V G E +
Sbjct: 153 PLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFV 205
Score = 55.2 bits (127), Expect = 8e-09
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 QLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDI-GIPDATGRLEILRIHT 182
+LLT MDG + ++V V+ ATNR +++DPAL R GR DR+I+ D R + + T
Sbjct: 260 ELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTIT 319
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
M L +VDL+ GA
Sbjct: 320 AKMLLSPEVDLDTFIMRPDASSGA 343
Score = 30.7 bits (66), Expect = 0.20
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 401 SSPSALRETVVEVPNVTWTDIGGLEGVKRELQELVQI 511
SS S LR E P+V++ D+GGL+ K+E++E V++
Sbjct: 118 SSISMLRPD--ERPDVSYADVGGLDVQKQEVREAVEL 152
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 56.8 bits (131), Expect = 3e-09
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHT 182
+Q+LT MDG + V ++AAT RP+ IDPAL R GR D+ I +P+ RLE+L+
Sbjct: 728 NQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLA 787
Query: 183 KNMKLGDDVDLEQIAAESHGHVGA 254
+ + L++++ + G+ A
Sbjct: 788 NRFHIENAAMLKKLSTLTDGYTYA 811
Score = 52.4 bits (120), Expect = 6e-08
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
PV++ + + ++ G+L +G PGCGKT LA AI++ FIS+KGPELL
Sbjct: 625 PVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGPELL 677
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +1
Query: 490 TPRTRADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFI 645
+PR P H ++ + + + GP GCGK+ L ++ + N I
Sbjct: 350 SPRLSMQPFPHEFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSI 401
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 56.4 bits (130), Expect = 3e-09
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +1
Query: 511 PVEHPDKFLKFG--MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
P+++P+ F G + +G+L YGPPGCGKT+LAKA+A + QA FI+V
Sbjct: 108 PLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINV 156
Score = 48.4 bits (110), Expect = 9e-07
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKS-SHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
++ +++ DG+ S V+V+ ATNRP ID A+RR R + I +P+A R +IL ++
Sbjct: 213 AEFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELY 270
Query: 180 TKNMKLGDDVDLEQIAAESHGHVGA-ISRLC 269
K + L + D + + G G+ I +C
Sbjct: 271 LKKVPLEANFDWNGVVNATAGLSGSYIKEVC 301
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 52.0 bits (119), Expect = 8e-08
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 669
P++ P F G +P G+L YGPPG GK+ LAKA+A E + F S+ +L+
Sbjct: 148 PIKLPQLF-SHGRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLV 199
Score = 41.9 bits (94), Expect = 8e-05
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 SQLLTLMDGM-KKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIH 179
++ L M+G+ K S V+V+ ATN P ++D A+RR RF++ I I +P+A R + ++
Sbjct: 250 TEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELN 307
Query: 180 TKNMKLG-DDVDLEQIAAESHGHVGA 254
+ D +++A + G+ G+
Sbjct: 308 VGKIPSELTSQDFKELAKMTDGYSGS 333
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 293 IREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETV-VEVPNVTWTDIGG 469
++EK + I + + V S + + + + K SAL + VE PNV W DI G
Sbjct: 74 LQEKNNQISSKSRVSNGNVEGSNSPTANEALDSDAKKLRSALTSAILVEKPNVRWDDIAG 133
Query: 470 LEGVKRELQELVQIRSNIP 526
LE K L+E V + +P
Sbjct: 134 LENAKEALKETVLLPIKLP 152
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 511 PVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
P PD F +P+RG+L +GPPG GKT+LA+A+A E ++ F S+ L
Sbjct: 478 PFLRPDLFQGL-REPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSL 528
Score = 33.1 bits (72), Expect = 0.037
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2
Query: 410 SALRETVVEVPNVTWTDIGGLEGVKRELQELV 505
S LRE VV V W DI GLE K L+E V
Sbjct: 444 SILREIVVSGDEVHWDDISGLEFAKHSLKEAV 475
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 49.2 bits (112), Expect = 5e-07
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 666
+P +G+L +GPPG GKT+LA+A+A E +A F S+ L
Sbjct: 410 EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSL 448
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 416 LRETVVEVPNVTWTDIGGLEGVKRELQELV 505
+ E + V W+DI GL+ K L+E V
Sbjct: 366 MNEIISNHEPVYWSDIAGLDDAKNSLKEAV 395
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 39.5 bits (88), Expect = 4e-04
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 SQLLTLMDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIG--IPDATGRLEILRI 176
S LL +DG+ S I+ TN P +DPAL R GR D + +G P+ R R
Sbjct: 325 SGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQV-REMFTRF 383
Query: 177 HTKNMKLGDDV 209
+ + ++ DD+
Sbjct: 384 YGHSPEMADDL 394
Score = 33.9 bits (74), Expect = 0.021
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 544 GMQPSRGVLFYGPPGCGKTLLAKAIANE 627
G+ RG L YGPPG GKT A+A E
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGE 265
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 33.5 bits (73), Expect = 0.028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 550 QPSRGVLFYGPPGCGKTLLAKAIAN 624
QP LF GP G GKTLL KA+A+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALAS 636
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 33.5 bits (73), Expect = 0.028
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKTLL 606
+FL F + +R V+F GPPG GK++L
Sbjct: 2504 EFLNFSLTKNRCVIFCGPPGSGKSML 2529
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 31.9 bits (69), Expect = 0.086
Identities = 19/33 (57%), Positives = 20/33 (60%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
K KFG +GVLF G G GKT LA AIA E
Sbjct: 58 KSKKFG---GKGVLFAGGAGTGKTALALAIAQE 87
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 30.3 bits (65), Expect = 0.26
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 505 ADPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 621
AD V L+ +P LF GP G GKT L KA+A
Sbjct: 515 ADAVRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKALA 553
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 30.3 bits (65), Expect = 0.26
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 508 DPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 627
D + +KF+ P +LFYGPPG GKT A A +
Sbjct: 42 DIISTLEKFISSNRVPH--MLFYGPPGTGKTSTILACARK 79
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.5 bits (63), Expect = 0.46
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 535 LKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 651
L FG+ V GP G GKT L K I + Q + SV
Sbjct: 613 LNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQPSTGSV 651
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQAN--FISVKGPEL 666
K ++ G R +L GPP GKT +A +A ++ F+++ E+
Sbjct: 56 KMIQEGRIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEV 103
>SPBC725.11c |php2||CCAAT-binding factor complex subunit Php2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -1
Query: 604 AKFYHNQEVRRREHRAKAACRTSGICRDVRPDLHE 500
AK YH + ++RRE RAK R G+ +P LHE
Sbjct: 14 AKQYH-RILKRREARAKLEERLRGVQTTKKPYLHE 47
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 544 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANF 642
G + + GPPG GKT + K+IA+ F
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREF 599
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 556 SRGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 660
SR +L GP GCGK+ + +A E + I P
Sbjct: 105 SRLLLICGPSGCGKSTAVQVLAKELGYSLIEWLNP 139
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 282 PCSRFVRRWISLTSRTIRLTQRFSILWLS 368
P S F+ +WI + + +RL +F I WLS
Sbjct: 56 PKSGFLVKWIIIDAIYLRLLPKFRIPWLS 84
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANE 627
+LFYG PG GKT A++ E
Sbjct: 55 MLFYGSPGTGKTSTILALSRE 75
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 544 GMQPSRGVLFYGPPGCGKTLLAKAIA 621
G+ + VL GPPG GKT A +A
Sbjct: 405 GLGLYKAVLLSGPPGIGKTTAAHLVA 430
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 547 MQPSRGVLFYGPPGCGKTLLAKAIANE 627
+Q + +L G PG GKT L A+A E
Sbjct: 1556 LQVLKPILLEGSPGVGKTSLITALARE 1582
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 434 EVPNVTWTDIGGLEGVKRELQELVQIRSNIPTNS*SSACSLRAVFSSTDLLVVVKLCW 607
E+ VT +E +++E EL++ N+ + S A S VF D ++ V L W
Sbjct: 1255 ELSTVTEAAKLNIEAIEQECSELIRGCQNLQIDCDSGALSDPTVFHPDDKILSVILPW 1312
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 550 QPSRGV-LFYGPPGCGKTLLAKAIANECQANFI 645
QP + V + GP G GKT +AKA++ + +I
Sbjct: 11 QPYKYVFVVIGPAGSGKTTMAKAVSEKLGFEYI 43
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 529 KFLKFGMQPSRGVLFYGPPGCGKT 600
K +KF + L +GPPG GKT
Sbjct: 216 KAVKFSIAVKELSLIHGPPGTGKT 239
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 559 RGVLFYGPPGCGKTLL 606
+G+ YG GCGKT L
Sbjct: 119 KGIYLYGDVGCGKTAL 134
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 661 LVPSLI*S*PDTRWRWPL 608
++ SL+ DT WRWPL
Sbjct: 199 IISSLVTEHSDTAWRWPL 216
>SPAC227.10 |||prefoldin subunit 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 114
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +2
Query: 275 EAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDNFRYAMTKSSPSALRETVVEVPNVTW 454
++ LQQI +K ++DLE D + +++ SMDN R + TV V +
Sbjct: 19 KSRLQQIAQK--IVDLETDADEHKLVMDTLNSMDNNRRCFRMIHGVLVERTVGTVVPILK 76
Query: 455 TDIGGLE 475
T G++
Sbjct: 77 TTQEGIQ 83
>SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 572
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 449 TWTDIGGLEGVKRELQELVQIRSNIPTNS*SSACSLR 559
TW G E +R L L++ + N+ S CSLR
Sbjct: 217 TWLGFGANEAYRRYLGLLIESENGKVGNTLSDPCSLR 253
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -3
Query: 443 WELPPLSHVTPTETISSLRTGSYPWRQPEN*EPLRQSDRPRGQ*DPSSHESAARLPPST 267
W+ P P +S + PW+QP ++ S+ Q P ++A LPP+T
Sbjct: 441 WQQPAAPQSAPA--LSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTT 497
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 263 TRDSAHVTVRLCCD 222
TRD A VTV +CC+
Sbjct: 204 TRDKARVTVTICCN 217
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANECQANFIS-VKGP 660
V GPPG GK+ L K++ IS + GP
Sbjct: 77 VAVMGPPGTGKSTLIKSLVRRYSKYTISQITGP 109
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.4 bits (53), Expect = 7.5
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 440 ELPPLSHVTPTETISSLRTGSYPWRQPEN*EPLRQSDRPRGQ*DPSSHESAARL-PPSTE 264
E PP S+ TP I + S + P P R G PSS++++ + PP+
Sbjct: 360 ESPPSSYATPLTGIRMPQPESDLYSYPREVSPSSGGYRMFGHSKPSSYKASGPVRPPNMA 419
Query: 263 T 261
T
Sbjct: 420 T 420
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 565 VLFYGPPGCGKTLLAKAIANECQANFISV 651
++ G PG GKT LA+ +A + I +
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTELENICI 39
>SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 66 TNRPNSIDPALRRFGRFDRE 125
T+ P S P +++FG DRE
Sbjct: 23 TSNPESEAPVIQKFGELDRE 42
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,539,421
Number of Sequences: 5004
Number of extensions: 49035
Number of successful extensions: 298
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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